RNA–Protein interactions for RNA: ENST00000398741.5

PRAME-201, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRAME, Length 2,202 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-201ENST00000398741 CERS4Q9HA82 394 aa12.1□□□□□ -0.47
PRAME-201ENST00000398741 NUDT15Q9NV35 164 aa12.1□□□□□ -0.47
PRAME-201ENST00000398741 HAO2Q9NYQ3 351 aa12.1□□□□□ -0.47
PRAME-201ENST00000398741 FBXL4Q9UKA2 621 aa12.1□□□□□ -0.47
PRAME-201ENST00000398741 CLEC4AQ9UMR7 237 aa12.1□□□□□ -0.47
PRAME-201ENST00000398741 DOCK9Q9BZ29 2069 aa12.1□□□□□ -0.47
PRAME-201ENST00000398741 GOLGA4Q13439 2230 aaKnown RBP12.1□□□□□ -0.47
PRAME-201ENST00000398741 MDC1Q14676 2089 aaKnown RBP12.1□□□□□ -0.47
PRAME-201ENST00000398741 A0A0B4J2E0 115 aa12.1□□□□□ -0.47
PRAME-201ENST00000398741 A0A1B0GWA3 101 aa12.1□□□□□ -0.47
PRAME-201ENST00000398741 A0A1B0GX12 115 aa12.1□□□□□ -0.47
PRAME-201ENST00000398741 H0Y8X5 98 aa12.1□□□□□ -0.47
PRAME-201ENST00000398741 H0YGG7 62 aa12.1□□□□□ -0.47
PRAME-201ENST00000398741 K7EQS6 105 aa12.1□□□□□ -0.47
PRAME-201ENST00000398741 PTP4A3O75365 173 aa12.1□□□□□ -0.47
PRAME-201ENST00000398741 SC5DO75845 299 aa12.1□□□□□ -0.47
PRAME-201ENST00000398741 PEPDP12955 493 aa12.1□□□□□ -0.47
PRAME-201ENST00000398741 TNFRSF4P43489 277 aa12.1□□□□□ -0.47
PRAME-201ENST00000398741 SRP9P49458 86 aaKnown RBP12.1□□□□□ -0.47
PRAME-201ENST00000398741 ARF3P61204 181 aaPredicted RBP12.1□□□□□ -0.47
PRAME-201ENST00000398741 GPLD1P80108 840 aa12.1□□□□□ -0.47
PRAME-201ENST00000398741 ANGPT1Q15389 498 aa12.1□□□□□ -0.47
PRAME-201ENST00000398741 DMKNQ6E0U4 476 aaPredicted RBP12.1□□□□□ -0.47
PRAME-201ENST00000398741 CREB3L2Q70SY1 520 aa12.1□□□□□ -0.47
PRAME-201ENST00000398741 ZNF767PQ75MW2 155 aa12.1□□□□□ -0.47
PRAME-201ENST00000398741 TOMM5Q8N4H5 51 aa12.1□□□□□ -0.47
PRAME-201ENST00000398741 TMEM52Q8NDY8 209 aa12.1□□□□□ -0.47
PRAME-201ENST00000398741 OR5T3Q8NGG3 340 aa12.1□□□□□ -0.47
PRAME-201ENST00000398741 OR13C5Q8NGS8 318 aa12.1□□□□□ -0.47
PRAME-201ENST00000398741 CNOT9Q92600 299 aaKnown RBP12.1□□□□□ -0.47
PRAME-201ENST00000398741 FAM131CQ96AQ9 280 aa12.1□□□□□ -0.47
PRAME-201ENST00000398741 PEX11GQ96HA9 241 aa12.1□□□□□ -0.47
PRAME-201ENST00000398741 PTCHD1Q96NR3 888 aa12.1□□□□□ -0.47
PRAME-201ENST00000398741 ABHD1Q96SE0 405 aa12.1□□□□□ -0.47
PRAME-201ENST00000398741 POLE3Q9NRF9 147 aa12.1□□□□□ -0.47
PRAME-201ENST00000398741 PCOLCE2Q9UKZ9 415 aa12.1□□□□□ -0.47
PRAME-201ENST00000398741 ING4Q9UNL4 249 aa12.1□□□□□ -0.47
PRAME-201ENST00000398741 NPFFR2Q9Y5X5 522 aa12.1□□□□□ -0.47
PRAME-201ENST00000398741 SNRNP200O75643 2136 aaKnown RBP12.1□□□□□ -0.47
PRAME-201ENST00000398741 SZT2Q5T011 3432 aa12.1□□□□□ -0.47
PRAME-201ENST00000398741 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.09□□□□□ -0.47
PRAME-201ENST00000398741 HOXC4P09017 264 aaPredicted RBP12.09□□□□□ -0.47
PRAME-201ENST00000398741 CT62P0C5K7 136 aa12.09□□□□□ -0.47
PRAME-201ENST00000398741 STOMP27105 288 aa12.09□□□□□ -0.47
PRAME-201ENST00000398741 PITPNAQ00169 270 aa12.09□□□□□ -0.47
PRAME-201ENST00000398741 GPR18Q14330 331 aa12.09□□□□□ -0.47
PRAME-201ENST00000398741 FCN2Q15485 313 aa12.09□□□□□ -0.47
PRAME-201ENST00000398741 TP53I3Q53FA7 332 aa12.09□□□□□ -0.47
PRAME-201ENST00000398741 RNASE12Q5GAN4 147 aaKnown RBP12.09□□□□□ -0.47
PRAME-201ENST00000398741 TMEM196Q5HYL7 178 aa12.09□□□□□ -0.47
PRAME-201ENST00000398741 FAM205BPQ63HN1 556 aa12.09□□□□□ -0.47
PRAME-201ENST00000398741 FAM3CQ92520 227 aa12.09□□□□□ -0.47
PRAME-201ENST00000398741 ERMAPQ96PL5 475 aaPredicted RBP12.09□□□□□ -0.47
PRAME-201ENST00000398741 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.09□□□□□ -0.475e-13■■■■■ 38.9
PRAME-201ENST00000398741 IGFLR1Q9H665 355 aa12.09□□□□□ -0.47
PRAME-201ENST00000398741 EVA1AQ9H8M9 152 aa12.09□□□□□ -0.47
PRAME-201ENST00000398741 PILRAQ9UKJ1 303 aa12.09□□□□□ -0.47
PRAME-201ENST00000398741 MRPS7Q9Y2R9 242 aaKnown RBP12.09□□□□□ -0.47
PRAME-201ENST00000398741 NUBP2Q9Y5Y2 271 aa12.09□□□□□ -0.47
PRAME-201ENST00000398741 SCN3AQ9NY46 2000 aa12.09□□□□□ -0.47
PRAME-201ENST00000398741 A0A1W2PPK0 400 aa12.09□□□□□ -0.47
PRAME-201ENST00000398741 ERVH48-1M5A8F1 160 aa12.09□□□□□ -0.47
PRAME-201ENST00000398741 ARL6IP5O75915 188 aa12.09□□□□□ -0.47
PRAME-201ENST00000398741 HOXB2P14652 356 aa12.09□□□□□ -0.47
PRAME-201ENST00000398741 DRD5P21918 477 aa12.09□□□□□ -0.47
PRAME-201ENST00000398741 BTCP35070 178 aa12.09□□□□□ -0.47
PRAME-201ENST00000398741 GBX2P52951 348 aaPredicted RBP12.09□□□□□ -0.47
PRAME-201ENST00000398741 ACTA2P62736 377 aa12.09□□□□□ -0.47
PRAME-201ENST00000398741 ACTG2P63267 376 aa12.09□□□□□ -0.47
PRAME-201ENST00000398741 CRYZQ08257 329 aaKnown RBP12.09□□□□□ -0.47
PRAME-201ENST00000398741 GAS6Q14393 721 aa12.09□□□□□ -0.47
PRAME-201ENST00000398741 ALG10BQ5I7T1 473 aa12.09□□□□□ -0.47
PRAME-201ENST00000398741 ANKRD54Q6NXT1 300 aa12.09□□□□□ -0.47
PRAME-201ENST00000398741 LYPD4Q6UWN0 246 aa12.09□□□□□ -0.47
PRAME-201ENST00000398741 SSX6Q7RTT6 188 aa12.09□□□□□ -0.47
PRAME-201ENST00000398741 ZAR1Q86SH2 424 aa12.09□□□□□ -0.47
PRAME-201ENST00000398741 TEX19Q8NA77 164 aa12.09□□□□□ -0.47
PRAME-201ENST00000398741 OR52E2Q8NGJ4 325 aa12.09□□□□□ -0.47
PRAME-201ENST00000398741 ZMYND19Q96E35 227 aaPredicted RBP12.09□□□□□ -0.47
PRAME-201ENST00000398741 ZFP3Q96NJ6 502 aa12.09□□□□□ -0.47
PRAME-201ENST00000398741 MYADMQ96S97 322 aa12.09□□□□□ -0.47
PRAME-201ENST00000398741 PBX4Q9BYU1 374 aa12.09□□□□□ -0.47
PRAME-201ENST00000398741 TRIM2Q9C040 744 aa12.09□□□□□ -0.47
PRAME-201ENST00000398741 BRD7Q9NPI1 651 aa12.09□□□□□ -0.47
PRAME-201ENST00000398741 FLRT3Q9NZU0 649 aa12.09□□□□□ -0.47
PRAME-201ENST00000398741 ZNF222Q9UK12 451 aa12.09□□□□□ -0.47
PRAME-201ENST00000398741 C5orf42Q9H799 3197 aa12.08□□□□□ -0.48
PRAME-201ENST00000398741 CYR61O00622 381 aa12.08□□□□□ -0.48
PRAME-201ENST00000398741 FABP7O15540 132 aa12.08□□□□□ -0.48
PRAME-201ENST00000398741 FLRT2O43155 660 aa12.08□□□□□ -0.48
PRAME-201ENST00000398741 OR10H2O60403 315 aa12.08□□□□□ -0.48
PRAME-201ENST00000398741 TSC22D2O75157 780 aa12.08□□□□□ -0.48
PRAME-201ENST00000398741 UBL3O95164 117 aa12.08□□□□□ -0.48
PRAME-201ENST00000398741 CD3GP09693 182 aa12.08□□□□□ -0.48
PRAME-201ENST00000398741 PVRP15151 417 aa12.08□□□□□ -0.48
PRAME-201ENST00000398741 RBM34P42696 430 aaKnown RBP12.08□□□□□ -0.48
PRAME-201ENST00000398741 GDI2P50395 445 aaKnown RBP12.08□□□□□ -0.48
PRAME-201ENST00000398741 ZNHIT3Q15649 155 aaPredicted RBP12.08□□□□□ -0.48
PRAME-201ENST00000398741 CCDC58Q4VC31 144 aa12.08□□□□□ -0.48
PRAME-201ENST00000398741 LAMTOR1Q6IAA8 161 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms