RNA–Protein interactions for RNA: ENST00000398153.6

HDDC2-202, Transcript of HD domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDDC2, Length 918 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-202ENST00000398153 RNPS1Q15287 305 aaKnown RBP12.81□□□□□ -0.36
HDDC2-202ENST00000398153 ADRM1Q16186 407 aa12.81□□□□□ -0.36
HDDC2-202ENST00000398153 TMEM176BQ3YBM2 270 aaPredicted RBP12.81□□□□□ -0.36
HDDC2-202ENST00000398153 NANOGP8Q6NSW7 305 aa12.81□□□□□ -0.36
HDDC2-202ENST00000398153 ZNF836Q6ZNA1 936 aa12.81□□□□□ -0.36
HDDC2-202ENST00000398153 NET1Q7Z628 596 aaPredicted RBP12.81□□□□□ -0.36
HDDC2-202ENST00000398153 VRK2Q86Y07 508 aa12.81□□□□□ -0.36
HDDC2-202ENST00000398153 KIF18BQ86Y91 864 aa12.81□□□□□ -0.36
HDDC2-202ENST00000398153 MED12LQ86YW9 2145 aa12.81□□□□□ -0.36
HDDC2-202ENST00000398153 SLC43A2Q8N370 569 aa12.81□□□□□ -0.36
HDDC2-202ENST00000398153 RELL2Q8NC24 303 aaPredicted RBP12.81□□□□□ -0.36
HDDC2-202ENST00000398153 NFKBIDQ8NI38 313 aa12.81□□□□□ -0.36
HDDC2-202ENST00000398153 FIG4Q92562 907 aa12.81□□□□□ -0.36
HDDC2-202ENST00000398153 RNASE6Q93091 150 aaKnown RBP12.81□□□□□ -0.36
HDDC2-202ENST00000398153 MARVELD3Q96A59 401 aa12.81□□□□□ -0.36
HDDC2-202ENST00000398153 GMPPAQ96IJ6 420 aaPredicted RBP12.81□□□□□ -0.36
HDDC2-202ENST00000398153 ZNF845Q96IR2 970 aaPredicted RBP12.81□□□□□ -0.36
HDDC2-202ENST00000398153 NANOGQ9H9S0 305 aa12.81□□□□□ -0.36
HDDC2-202ENST00000398153 CHRNA9Q9UGM1 479 aa12.81□□□□□ -0.36
HDDC2-202ENST00000398153 PACSIN3Q9UKS6 424 aa12.81□□□□□ -0.36
HDDC2-202ENST00000398153 ANGPT4Q9Y264 503 aa12.81□□□□□ -0.36
HDDC2-202ENST00000398153 AP3M1Q9Y2T2 418 aa12.81□□□□□ -0.36
HDDC2-202ENST00000398153 HDGFL3Q9Y3E1 203 aa12.81□□□□□ -0.36
HDDC2-202ENST00000398153 KIAA1549Q9HCM3 1950 aa12.81□□□□□ -0.36
HDDC2-202ENST00000398153 CENPEQ02224 2701 aa12.81□□□□□ -0.36
HDDC2-202ENST00000398153 A0A1W2PNV4 684 aa12.8□□□□□ -0.36
HDDC2-202ENST00000398153 C19orf84I3L1E1 186 aa12.8□□□□□ -0.36
HDDC2-202ENST00000398153 MSTNO14793 375 aa12.8□□□□□ -0.36
HDDC2-202ENST00000398153 MRASO14807 208 aa12.8□□□□□ -0.36
HDDC2-202ENST00000398153 ZNF208O43345 1280 aa12.8□□□□□ -0.36
HDDC2-202ENST00000398153 DNPH1O43598 174 aa12.8□□□□□ -0.36
HDDC2-202ENST00000398153 CXCL13O43927 109 aa12.8□□□□□ -0.36
HDDC2-202ENST00000398153 SNX3O60493 162 aa12.8□□□□□ -0.36
HDDC2-202ENST00000398153 BCAS1O75363 584 aaPredicted RBP12.8□□□□□ -0.36
HDDC2-202ENST00000398153 TNFSF13O75888 250 aa12.8□□□□□ -0.36
HDDC2-202ENST00000398153 IL11P20809 199 aa12.8□□□□□ -0.36
HDDC2-202ENST00000398153 ACAA2P42765 397 aaKnown RBP12.8□□□□□ -0.36
HDDC2-202ENST00000398153 POLR2HP52434 150 aaKnown RBP12.8□□□□□ -0.36
HDDC2-202ENST00000398153 SEC24CP53992 1094 aa12.8□□□□□ -0.36
HDDC2-202ENST00000398153 CSNK2A1P68400 391 aaPredicted RBP12.8□□□□□ -0.36
HDDC2-202ENST00000398153 FOXF2Q12947 444 aa12.8□□□□□ -0.36
HDDC2-202ENST00000398153 GUSBP1Q15486 140 aa12.8□□□□□ -0.36
HDDC2-202ENST00000398153 CYP51A1Q16850 503 aa12.8□□□□□ -0.36
HDDC2-202ENST00000398153 SYT14P1Q58G82 188 aa12.8□□□□□ -0.36
HDDC2-202ENST00000398153 RPS26P11Q5JNZ5 115 aaPredicted RBP12.8□□□□□ -0.36
HDDC2-202ENST00000398153 INTS11Q5TA45 600 aaKnown RBP12.8□□□□□ -0.36
HDDC2-202ENST00000398153 WBP2NLQ6ICG8 309 aa12.8□□□□□ -0.36
HDDC2-202ENST00000398153 DHRS4L2Q6PKH6 230 aa12.8□□□□□ -0.36
HDDC2-202ENST00000398153 FAM214BQ7L5A3 538 aa12.8□□□□□ -0.36
HDDC2-202ENST00000398153 SNX32Q86XE0 403 aa12.8□□□□□ -0.36
HDDC2-202ENST00000398153 DMRTC2Q8IXT2 367 aaPredicted RBP12.8□□□□□ -0.36
HDDC2-202ENST00000398153 C10orf111Q8N326 155 aa12.8□□□□□ -0.36
HDDC2-202ENST00000398153 ZNF524Q96C55 264 aa12.8□□□□□ -0.36
HDDC2-202ENST00000398153 ELAC2Q9BQ52 826 aaKnown RBP12.8□□□□□ -0.36
HDDC2-202ENST00000398153 TACO1Q9BSH4 297 aaKnown RBP12.8□□□□□ -0.36
HDDC2-202ENST00000398153 ADAM19Q9H013 955 aa12.8□□□□□ -0.36
HDDC2-202ENST00000398153 TMEM185BQ9H7F4 350 aa12.8□□□□□ -0.36
HDDC2-202ENST00000398153 NPDC1Q9NQX5 325 aaPredicted RBP12.8□□□□□ -0.36
HDDC2-202ENST00000398153 RLIMQ9NVW2 624 aa12.8□□□□□ -0.36
HDDC2-202ENST00000398153 INTS1Q8N201 2190 aaKnown RBP12.8□□□□□ -0.36
HDDC2-202ENST00000398153 LOC100653049A0A140TA62 436 aa12.79□□□□□ -0.36
HDDC2-202ENST00000398153 ADAM11O75078 769 aa12.79□□□□□ -0.36
HDDC2-202ENST00000398153 SS18L1O75177 396 aaPredicted RBP12.79□□□□□ -0.36
HDDC2-202ENST00000398153 KRT34O76011 436 aa12.79□□□□□ -0.36
HDDC2-202ENST00000398153 CD8BP10966 210 aa12.79□□□□□ -0.36
HDDC2-202ENST00000398153 KIR2DL2P43627 348 aaPredicted RBP12.79□□□□□ -0.36
HDDC2-202ENST00000398153 PCBP3P57721 371 aaKnown RBP12.79□□□□□ -0.36
HDDC2-202ENST00000398153 MTPNP58546 118 aa12.79□□□□□ -0.36
HDDC2-202ENST00000398153 SORDQ00796 357 aa12.79□□□□□ -0.36
HDDC2-202ENST00000398153 SF3A3Q12874 501 aaKnown RBP eCLIP12.79□□□□□ -0.36
HDDC2-202ENST00000398153 ZNF239Q16600 458 aaKnown RBP12.79□□□□□ -0.36
HDDC2-202ENST00000398153 REP15Q6BDI9 236 aa12.79□□□□□ -0.36
HDDC2-202ENST00000398153 ZNF787Q6DD87 383 aa12.79□□□□□ -0.36
HDDC2-202ENST00000398153 MEX3BQ6ZN04 569 aaKnown RBP12.79□□□□□ -0.36
HDDC2-202ENST00000398153 TMPPEQ6ZT21 453 aa12.79□□□□□ -0.36
HDDC2-202ENST00000398153 ARPINQ7Z6K5 226 aa12.79□□□□□ -0.36
HDDC2-202ENST00000398153 HMGN2P46Q86SG4 172 aa12.79□□□□□ -0.36
HDDC2-202ENST00000398153 PATL1Q86TB9 770 aaKnown RBP12.79□□□□□ -0.36
HDDC2-202ENST00000398153 ADGRG3Q86Y34 549 aa12.79□□□□□ -0.36
HDDC2-202ENST00000398153 PTOV1Q86YD1 416 aa12.79□□□□□ -0.36
HDDC2-202ENST00000398153 GCNT2Q8N0V5 402 aa12.79□□□□□ -0.36
HDDC2-202ENST00000398153 CLIP4Q8N3C7 705 aa12.79□□□□□ -0.36
HDDC2-202ENST00000398153 RNF128Q8TEB7 428 aa12.79□□□□□ -0.36
HDDC2-202ENST00000398153 RASSF5Q8WWW0 418 aa12.79□□□□□ -0.36
HDDC2-202ENST00000398153 DDIT4LQ96D03 193 aa12.79□□□□□ -0.36
HDDC2-202ENST00000398153 CMTM5Q96DZ9 223 aa12.79□□□□□ -0.36
HDDC2-202ENST00000398153 C14orf79Q96F83 325 aa12.79□□□□□ -0.36
HDDC2-202ENST00000398153 ECSITQ9BQ95 431 aa12.79□□□□□ -0.36
HDDC2-202ENST00000398153 COQ10BQ9H8M1 238 aa12.79□□□□□ -0.36
HDDC2-202ENST00000398153 CTPS2Q9NRF8 586 aa12.79□□□□□ -0.36
HDDC2-202ENST00000398153 KLHL28Q9NXS3 571 aa12.79□□□□□ -0.36
HDDC2-202ENST00000398153 KCNN3Q9UGI6 736 aa12.79□□□□□ -0.36
HDDC2-202ENST00000398153 TRAPPC4Q9Y296 219 aa12.79□□□□□ -0.36
HDDC2-202ENST00000398153 EMC9Q9Y3B6 208 aa12.79□□□□□ -0.36
HDDC2-202ENST00000398153 CHST2Q9Y4C5 530 aa12.79□□□□□ -0.36
HDDC2-202ENST00000398153 A8MXE2 369 aa12.78□□□□□ -0.36
HDDC2-202ENST00000398153 EEF1E1-BLOC1S5C9J1V9 151 aa12.78□□□□□ -0.36
HDDC2-202ENST00000398153 FXYD1O00168 92 aa12.78□□□□□ -0.36
HDDC2-202ENST00000398153 NDUFAB1O14561 156 aa12.78□□□□□ -0.36
HDDC2-202ENST00000398153 EEF1E1O43324 174 aaKnown RBP12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms