RNA–Protein interactions for RNA: ENST00000397537.2

SMCO1-201, Transcript of single-pass membrane protein with coiled-coil domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO1, Length 1,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO1-201ENST00000397537 RAB3GAP2Q9H2M9 1393 aa6.08□□□□□ -1.44
SMCO1-201ENST00000397537 EDC4Q6P2E9 1401 aaKnown RBP6.08□□□□□ -1.44
SMCO1-201ENST00000397537 NCOR1O75376 2440 aa6.07□□□□□ -1.44
SMCO1-201ENST00000397537 KCNE1BA0A087WTH5 132 aa6.07□□□□□ -1.44
SMCO1-201ENST00000397537 A0A0A6YYH2 397 aa6.07□□□□□ -1.44
SMCO1-201ENST00000397537 A6NJ64 397 aa6.07□□□□□ -1.44
SMCO1-201ENST00000397537 ERVV-1B6SEH8 477 aa6.07□□□□□ -1.44
SMCO1-201ENST00000397537 RNASEK-C17orf49H0YIS7 233 aa6.07□□□□□ -1.44
SMCO1-201ENST00000397537 H3BTX0 84 aa6.07□□□□□ -1.44
SMCO1-201ENST00000397537 SLC22A1O15245 554 aa6.07□□□□□ -1.44
SMCO1-201ENST00000397537 PSIP1O75475 530 aaKnown RBP6.07□□□□□ -1.44
SMCO1-201ENST00000397537 NOL4O94818 638 aa6.07□□□□□ -1.44
SMCO1-201ENST00000397537 MT-CO3P00414 261 aa6.07□□□□□ -1.44
SMCO1-201ENST00000397537 CTXN2P0C2S0 81 aa6.07□□□□□ -1.44
SMCO1-201ENST00000397537 PSKH1P11801 424 aa6.07□□□□□ -1.44
SMCO1-201ENST00000397537 GFAPP14136 432 aa6.07□□□□□ -1.44
SMCO1-201ENST00000397537 TMPOP42166 694 aaKnown RBP6.07□□□□□ -1.44
SMCO1-201ENST00000397537 UCNP55089 124 aa6.07□□□□□ -1.44
SMCO1-201ENST00000397537 ELLP55199 621 aaPredicted RBP6.07□□□□□ -1.44
SMCO1-201ENST00000397537 OC90Q02509 493 aaPredicted RBP6.07□□□□□ -1.44
SMCO1-201ENST00000397537 CYP24A1Q07973 514 aa6.07□□□□□ -1.44
SMCO1-201ENST00000397537 FOXE3Q13461 319 aa6.07□□□□□ -1.44
SMCO1-201ENST00000397537 EXOC3L4Q17RC7 722 aa6.07□□□□□ -1.44
SMCO1-201ENST00000397537 C5orf47Q569G3 176 aa6.07□□□□□ -1.44
SMCO1-201ENST00000397537 KHDRBS2Q5VWX1 349 aaKnown RBP6.07□□□□□ -1.44
SMCO1-201ENST00000397537 ADNP2Q6IQ32 1131 aa6.07□□□□□ -1.44
SMCO1-201ENST00000397537 Q6ZNX1 250 aa6.07□□□□□ -1.44
SMCO1-201ENST00000397537 RTL4Q6ZR62 310 aa6.07□□□□□ -1.44
SMCO1-201ENST00000397537 STOX1Q6ZVD7 989 aa6.07□□□□□ -1.44
SMCO1-201ENST00000397537 ZNF546Q86UE3 836 aa6.07□□□□□ -1.44
SMCO1-201ENST00000397537 TMEM99Q8N816 258 aa6.07□□□□□ -1.44
SMCO1-201ENST00000397537 C8orf44Q96CB5 159 aa6.07□□□□□ -1.44
SMCO1-201ENST00000397537 ZNF578Q96N58 590 aaPredicted RBP6.07□□□□□ -1.44
SMCO1-201ENST00000397537 HSD17B14Q9BPX1 270 aa6.07□□□□□ -1.44
SMCO1-201ENST00000397537 CCDC3Q9BQI4 270 aa6.07□□□□□ -1.44
SMCO1-201ENST00000397537 TECRQ9NZ01 308 aaKnown RBP6.07□□□□□ -1.44
SMCO1-201ENST00000397537 CYB5R1Q9UHQ9 305 aa6.07□□□□□ -1.44
SMCO1-201ENST00000397537 OR1A2Q9Y585 309 aa6.07□□□□□ -1.44
SMCO1-201ENST00000397537 XDHP47989 1333 aa6.07□□□□□ -1.44
SMCO1-201ENST00000397537 MUC6Q6W4X9 2439 aa6.06□□□□□ -1.44
SMCO1-201ENST00000397537 KBTBD11-OT1A0A1B0GTJ5 212 aa6.06□□□□□ -1.44
SMCO1-201ENST00000397537 LRP5LA4QPB2 252 aa6.06□□□□□ -1.44
SMCO1-201ENST00000397537 OR10H3O60404 316 aa6.06□□□□□ -1.44
SMCO1-201ENST00000397537 ADAP1O75689 374 aa6.06□□□□□ -1.44
SMCO1-201ENST00000397537 B3GAT3O94766 335 aa6.06□□□□□ -1.44
SMCO1-201ENST00000397537 VAPBO95292 243 aa6.06□□□□□ -1.44
SMCO1-201ENST00000397537 CD59P13987 128 aa6.06□□□□□ -1.44
SMCO1-201ENST00000397537 GIFP27352 417 aa6.06□□□□□ -1.44
SMCO1-201ENST00000397537 CD1CP29017 333 aa6.06□□□□□ -1.44
SMCO1-201ENST00000397537 ACTR1BP42025 376 aa6.06□□□□□ -1.44
SMCO1-201ENST00000397537 SERPINB9P50453 376 aa6.06□□□□□ -1.44
SMCO1-201ENST00000397537 TMPRSS3P57727 454 aa6.06□□□□□ -1.44
SMCO1-201ENST00000397537 GNG2P59768 71 aa6.06□□□□□ -1.44
SMCO1-201ENST00000397537 ERVK-8P63133 956 aa6.06□□□□□ -1.44
SMCO1-201ENST00000397537 ELF3P78545 371 aaPredicted RBP6.06□□□□□ -1.44
SMCO1-201ENST00000397537 MESDQ14696 234 aa6.06□□□□□ -1.44
SMCO1-201ENST00000397537 TRAM2Q15035 370 aa6.06□□□□□ -1.44
SMCO1-201ENST00000397537 AWAT1Q58HT5 328 aa6.06□□□□□ -1.44
SMCO1-201ENST00000397537 LY6G6FQ5SQ64 297 aa6.06□□□□□ -1.44
SMCO1-201ENST00000397537 OR52E8Q6IFG1 317 aa6.06□□□□□ -1.44
SMCO1-201ENST00000397537 UNQ6126/PRO20091Q6UXV3 157 aa6.06□□□□□ -1.44
SMCO1-201ENST00000397537 CYB5R4Q7L1T6 521 aa6.06□□□□□ -1.44
SMCO1-201ENST00000397537 RANBP3LQ86VV4 465 aaPredicted RBP6.06□□□□□ -1.44
SMCO1-201ENST00000397537 LINC00518Q8N0U6 118 aa6.06□□□□□ -1.44
SMCO1-201ENST00000397537 CCDC185Q8N715 623 aa6.06□□□□□ -1.44
SMCO1-201ENST00000397537 CSNK1A1LQ8N752 337 aa6.06□□□□□ -1.44
SMCO1-201ENST00000397537 ATP6V0D2Q8N8Y2 350 aa6.06□□□□□ -1.44
SMCO1-201ENST00000397537 RNF149Q8NC42 400 aa6.06□□□□□ -1.44
SMCO1-201ENST00000397537 NOA1Q8NC60 698 aaKnown RBP6.06□□□□□ -1.44
SMCO1-201ENST00000397537 ASB10Q8WXI3 467 aa6.06□□□□□ -1.44
SMCO1-201ENST00000397537 ACOT11Q8WXI4 607 aaPredicted RBP6.06□□□□□ -1.44
SMCO1-201ENST00000397537 PIGTQ969N2 578 aa6.06□□□□□ -1.44
SMCO1-201ENST00000397537 TSACCQ96A04 125 aaPredicted RBP6.06□□□□□ -1.44
SMCO1-201ENST00000397537 OTULINQ96BN8 352 aa6.06□□□□□ -1.44
SMCO1-201ENST00000397537 TMEM19Q96HH6 336 aa6.06□□□□□ -1.44
SMCO1-201ENST00000397537 ZNF419Q96HQ0 510 aaPredicted RBP6.06□□□□□ -1.44
SMCO1-201ENST00000397537 BOD1Q96IK1 185 aa6.06□□□□□ -1.44
SMCO1-201ENST00000397537 C9orf72Q96LT7 481 aa6.06□□□□□ -1.44
SMCO1-201ENST00000397537 TOX2Q96NM4 488 aa6.06□□□□□ -1.44
SMCO1-201ENST00000397537 MAP1LC3CQ9BXW4 147 aa6.06□□□□□ -1.44
SMCO1-201ENST00000397537 ALOXE3Q9BYJ1 711 aa6.06□□□□□ -1.44
SMCO1-201ENST00000397537 SPRY4Q9C004 299 aa6.06□□□□□ -1.44
SMCO1-201ENST00000397537 ZNF665Q9H7R5 613 aa6.06□□□□□ -1.44
SMCO1-201ENST00000397537 CLN8Q9UBY8 286 aa6.06□□□□□ -1.44
SMCO1-201ENST00000397537 GINS2Q9Y248 185 aa6.06□□□□□ -1.44
SMCO1-201ENST00000397537 YIPF1Q9Y548 306 aa6.06□□□□□ -1.44
SMCO1-201ENST00000397537 KCTD3Q9Y597 815 aa6.06□□□□□ -1.44
SMCO1-201ENST00000397537 TSSC4Q9Y5U2 329 aaPredicted RBP6.06□□□□□ -1.44
SMCO1-201ENST00000397537 TONSLQ96HA7 1378 aa6.06□□□□□ -1.44
SMCO1-201ENST00000397537 ZNF609O15014 1411 aa6.06□□□□□ -1.44
SMCO1-201ENST00000397537 A0A1W2PP11 408 aa6.06□□□□□ -1.44
SMCO1-201ENST00000397537 WDR27A2RRH5 827 aa6.06□□□□□ -1.44
SMCO1-201ENST00000397537 ERI2A8K979 691 aaKnown RBP6.06□□□□□ -1.44
SMCO1-201ENST00000397537 POC1B-GALNT4F8VUJ3 575 aa6.06□□□□□ -1.44
SMCO1-201ENST00000397537 H3BMH7 237 aa6.06□□□□□ -1.44
SMCO1-201ENST00000397537 PI15O43692 258 aa6.06□□□□□ -1.44
SMCO1-201ENST00000397537 WISP2O76076 250 aa6.06□□□□□ -1.44
SMCO1-201ENST00000397537 NXPH3O95157 252 aa6.06□□□□□ -1.44
SMCO1-201ENST00000397537 PLEKHA8P1O95397 391 aa6.06□□□□□ -1.44
SMCO1-201ENST00000397537 TFPTP0C1Z6 253 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms