RNA–Protein interactions for RNA: ENST00000396581.5

TRIM40-207, Transcript of tripartite motif containing 40, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM40, Length 2,086 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-207ENST00000396581 RCBTB2O95199 551 aa12.32□□□□□ -0.44
TRIM40-207ENST00000396581 CFDP00746 253 aaPredicted RBP12.32□□□□□ -0.44
TRIM40-207ENST00000396581 WNT1P04628 370 aa12.32□□□□□ -0.44
TRIM40-207ENST00000396581 CD1AP06126 327 aa12.32□□□□□ -0.44
TRIM40-207ENST00000396581 PRR23D2P0DMB1 279 aaPredicted RBP12.32□□□□□ -0.44
TRIM40-207ENST00000396581 BMP7P18075 431 aa12.32□□□□□ -0.44
TRIM40-207ENST00000396581 NT5EP21589 574 aa12.32□□□□□ -0.44
TRIM40-207ENST00000396581 RPS4Y1P22090 263 aaKnown RBP12.32□□□□□ -0.44
TRIM40-207ENST00000396581 CERS1P27544 350 aa12.32□□□□□ -0.44
TRIM40-207ENST00000396581 SNTB2Q13425 540 aaKnown RBP12.32□□□□□ -0.44
TRIM40-207ENST00000396581 SLC16A11Q8NCK7 471 aa12.32□□□□□ -0.44
TRIM40-207ENST00000396581 SRFBP1Q8NEF9 429 aaKnown RBP12.32□□□□□ -0.44
TRIM40-207ENST00000396581 OR6C4Q8NGE1 309 aa12.32□□□□□ -0.44
TRIM40-207ENST00000396581 OR4D9Q8NGE8 314 aa12.32□□□□□ -0.44
TRIM40-207ENST00000396581 MS4A4EQ96PG1 132 aa12.32□□□□□ -0.44
TRIM40-207ENST00000396581 GSX2Q9BZM3 304 aa12.32□□□□□ -0.44
TRIM40-207ENST00000396581 ZNF436Q9C0F3 470 aaPredicted RBP12.32□□□□□ -0.44
TRIM40-207ENST00000396581 SLC6A20Q9NP91 592 aa12.32□□□□□ -0.44
TRIM40-207ENST00000396581 ZDHHC4Q9NPG8 344 aa12.32□□□□□ -0.44
TRIM40-207ENST00000396581 NPDC1Q9NQX5 325 aaPredicted RBP12.32□□□□□ -0.44
TRIM40-207ENST00000396581 NANSQ9NR45 359 aa12.32□□□□□ -0.44
TRIM40-207ENST00000396581 EVA1BQ9NVM1 165 aa12.32□□□□□ -0.44
TRIM40-207ENST00000396581 SIGLEC7Q9Y286 467 aa12.32□□□□□ -0.44
TRIM40-207ENST00000396581 SLC35A3Q9Y2D2 325 aa12.32□□□□□ -0.44
TRIM40-207ENST00000396581 CDHR4A6H8M9 788 aa12.31□□□□□ -0.44
TRIM40-207ENST00000396581 GPR89AB7ZAQ6 455 aa12.31□□□□□ -0.44
TRIM40-207ENST00000396581 KHNYNO15037 678 aaKnown RBP12.31□□□□□ -0.44
TRIM40-207ENST00000396581 SCO1O75880 301 aa12.31□□□□□ -0.44
TRIM40-207ENST00000396581 SERPINA3P01011 423 aa12.31□□□□□ -0.44
TRIM40-207ENST00000396581 HPXP02790 462 aa12.31□□□□□ -0.44
TRIM40-207ENST00000396581 GPR89BP0CG08 455 aa12.31□□□□□ -0.44
TRIM40-207ENST00000396581 HOXB3P14651 431 aaPredicted RBP12.31□□□□□ -0.44
TRIM40-207ENST00000396581 HTR2AP28223 471 aa12.31□□□□□ -0.44
TRIM40-207ENST00000396581 TNFRSF4P43489 277 aa12.31□□□□□ -0.44
TRIM40-207ENST00000396581 KIR2DL1P43626 348 aaPredicted RBP12.31□□□□□ -0.44
TRIM40-207ENST00000396581 SOX9P48436 509 aa12.31□□□□□ -0.44
TRIM40-207ENST00000396581 OR12D2P58182 307 aa12.31□□□□□ -0.44
TRIM40-207ENST00000396581 RPS7P62081 194 aaKnown RBP12.31□□□□□ -0.44
TRIM40-207ENST00000396581 ACTC1P68032 377 aa12.31□□□□□ -0.44
TRIM40-207ENST00000396581 ACTA1P68133 377 aa12.31□□□□□ -0.44
TRIM40-207ENST00000396581 LTB4RQ15722 352 aa12.31□□□□□ -0.44
TRIM40-207ENST00000396581 FAM69AQ5T7M9 428 aa12.31□□□□□ -0.44
TRIM40-207ENST00000396581 FAM111BQ6SJ93 734 aa12.31□□□□□ -0.44
TRIM40-207ENST00000396581 THSD4Q6ZMP0 1018 aa12.31□□□□□ -0.44
TRIM40-207ENST00000396581 RANBP3LQ86VV4 465 aaPredicted RBP12.31□□□□□ -0.44
TRIM40-207ENST00000396581 FAM71CQ8NEG0 241 aa12.31□□□□□ -0.44
TRIM40-207ENST00000396581 TMEM239Q8WW34 195 aa12.31□□□□□ -0.44
TRIM40-207ENST00000396581 THAP4Q8WY91 577 aa12.31□□□□□ -0.44
TRIM40-207ENST00000396581 GHSRQ92847 366 aa12.31□□□□□ -0.44
TRIM40-207ENST00000396581 RAB7BQ96AH8 199 aa12.31□□□□□ -0.44
TRIM40-207ENST00000396581 NACC2Q96BF6 587 aa12.31□□□□□ -0.44
TRIM40-207ENST00000396581 INSM2Q96T92 566 aaPredicted RBP12.31□□□□□ -0.44
TRIM40-207ENST00000396581 MACROD1Q9BQ69 325 aa12.31□□□□□ -0.44
TRIM40-207ENST00000396581 RAB11FIP5Q9BXF6 653 aa12.31□□□□□ -0.44
TRIM40-207ENST00000396581 C20orf85Q9H1P6 137 aa12.31□□□□□ -0.44
TRIM40-207ENST00000396581 TTYH1Q9H313 450 aaPredicted RBP12.31□□□□□ -0.44
TRIM40-207ENST00000396581 C20orf141Q9NUB4 165 aa12.31□□□□□ -0.44
TRIM40-207ENST00000396581 MOSPD1Q9UJG1 213 aa12.31□□□□□ -0.44
TRIM40-207ENST00000396581 WDR45Q9Y484 360 aa12.31□□□□□ -0.44
TRIM40-207ENST00000396581 MAB21L2Q9Y586 359 aa12.31□□□□□ -0.44
TRIM40-207ENST00000396581 PCDHGA9Q9Y5G4 932 aaKnown RBP12.31□□□□□ -0.44
TRIM40-207ENST00000396581 EYSQ5T1H1 3165 aa12.31□□□□□ -0.44
TRIM40-207ENST00000396581 MDC1Q14676 2089 aaKnown RBP12.31□□□□□ -0.44
TRIM40-207ENST00000396581 K7EQS6 105 aa12.31□□□□□ -0.44
TRIM40-207ENST00000396581 FMO6PO60774 539 aa12.31□□□□□ -0.44
TRIM40-207ENST00000396581 UCHL1P09936 223 aa12.31□□□□□ -0.44
TRIM40-207ENST00000396581 SNRPBP14678 240 aaKnown RBP12.31□□□□□ -0.44
TRIM40-207ENST00000396581 FUT1P19526 365 aa12.31□□□□□ -0.44
TRIM40-207ENST00000396581 SSTR2P30874 369 aa12.31□□□□□ -0.44
TRIM40-207ENST00000396581 POU4F2Q12837 409 aa12.31□□□□□ -0.44
TRIM40-207ENST00000396581 ELFN2Q5R3F8 820 aa12.31□□□□□ -0.44
TRIM40-207ENST00000396581 EXOSC6Q5RKV6 272 aaKnown RBP12.31□□□□□ -0.44
TRIM40-207ENST00000396581 NLRC3Q7RTR2 1065 aa12.31□□□□□ -0.44
TRIM40-207ENST00000396581 OVCH1Q7RTY7 1134 aa12.31□□□□□ -0.44
TRIM40-207ENST00000396581 NRROSQ86YC3 692 aa12.31□□□□□ -0.44
TRIM40-207ENST00000396581 OR2L13Q8N349 312 aa12.31□□□□□ -0.44
TRIM40-207ENST00000396581 ZNF527Q8NB42 609 aa12.31□□□□□ -0.44
TRIM40-207ENST00000396581 OR7G2Q8NG99 324 aa12.31□□□□□ -0.44
TRIM40-207ENST00000396581 OR2T4Q8NH00 348 aa12.31□□□□□ -0.44
TRIM40-207ENST00000396581 OR5J2Q8NH18 312 aa12.31□□□□□ -0.44
TRIM40-207ENST00000396581 PFN4Q8NHR9 129 aa12.31□□□□□ -0.44
TRIM40-207ENST00000396581 SMPDL3BQ92485 455 aa12.31□□□□□ -0.44
TRIM40-207ENST00000396581 KAT2AQ92830 837 aa12.31□□□□□ -0.44
TRIM40-207ENST00000396581 CDS1Q92903 461 aa12.31□□□□□ -0.44
TRIM40-207ENST00000396581 C12orf66Q96MD2 445 aa12.31□□□□□ -0.44
TRIM40-207ENST00000396581 FERD3LQ96RJ6 166 aa12.31□□□□□ -0.44
TRIM40-207ENST00000396581 GSDMCQ9BYG8 508 aa12.31□□□□□ -0.44
TRIM40-207ENST00000396581 C6orf106Q9H6K1 298 aaPredicted RBP12.31□□□□□ -0.44
TRIM40-207ENST00000396581 SYNPO2LQ9H987 977 aa12.31□□□□□ -0.44
TRIM40-207ENST00000396581 MRPS30Q9NP92 439 aaKnown RBP12.31□□□□□ -0.44
TRIM40-207ENST00000396581 KLHL1Q9NR64 748 aa12.31□□□□□ -0.44
TRIM40-207ENST00000396581 APOBEC3BQ9UH17 382 aaKnown RBP12.31□□□□□ -0.44
TRIM40-207ENST00000396581 KIF25Q9UIL4 384 aa12.31□□□□□ -0.44
TRIM40-207ENST00000396581 PRELID1Q9Y255 219 aa12.31□□□□□ -0.44
TRIM40-207ENST00000396581 ZNF780BQ9Y6R6 833 aa12.31□□□□□ -0.44
TRIM40-207ENST00000396581 TRIOBPQ9H2D6 2365 aa12.31□□□□□ -0.44
TRIM40-207ENST00000396581 TBC1D3EA0A087X179 549 aa12.3□□□□□ -0.44
TRIM40-207ENST00000396581 J3QLW9 94 aa12.3□□□□□ -0.44
TRIM40-207ENST00000396581 PTP4A3O75365 173 aa12.3□□□□□ -0.44
TRIM40-207ENST00000396581 STX11O75558 287 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms