RNA–Protein interactions for RNA: ENST00000395969.6

VPS41-203, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5 BASIC

Gene VPS41, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-203ENST00000395969 SLC6A14Q9UN76 642 aa4.96□□□□□ -1.61
VPS41-203ENST00000395969 PCDHGA9Q9Y5G4 932 aaKnown RBP4.96□□□□□ -1.61
VPS41-203ENST00000395969 CPAMD8Q8IZJ3 1885 aa4.96□□□□□ -1.62
VPS41-203ENST00000395969 TRBV23-1A0A0A0MS06 115 aa4.96□□□□□ -1.62
VPS41-203ENST00000395969 LOC102723532A0A0G2JNH3 316 aa4.96□□□□□ -1.62
VPS41-203ENST00000395969 OR6C76A6NM76 312 aa4.96□□□□□ -1.62
VPS41-203ENST00000395969 A8MXK9 166 aa4.96□□□□□ -1.62
VPS41-203ENST00000395969 ISM1B1AKI9 464 aa4.96□□□□□ -1.62
VPS41-203ENST00000395969 ABCD4O14678 606 aa4.96□□□□□ -1.62
VPS41-203ENST00000395969 AKAP8O43823 692 aaKnown RBP4.96□□□□□ -1.62
VPS41-203ENST00000395969 OR5F1O95221 314 aa4.96□□□□□ -1.62
VPS41-203ENST00000395969 PAHP00439 452 aa4.96□□□□□ -1.62
VPS41-203ENST00000395969 HRGP04196 525 aa4.96□□□□□ -1.62
VPS41-203ENST00000395969 GSTM3P21266 225 aa4.96□□□□□ -1.62
VPS41-203ENST00000395969 DRD5P21918 477 aa4.96□□□□□ -1.62
VPS41-203ENST00000395969 MPIP34949 423 aa4.96□□□□□ -1.62
VPS41-203ENST00000395969 IDH2P48735 452 aaKnown RBP4.96□□□□□ -1.62
VPS41-203ENST00000395969 HOXA1P49639 335 aaPredicted RBP4.96□□□□□ -1.62
VPS41-203ENST00000395969 PRR5P85299 388 aa4.96□□□□□ -1.62
VPS41-203ENST00000395969 HSF2Q03933 536 aa4.96□□□□□ -1.62
VPS41-203ENST00000395969 MLLT11Q13015 90 aaPredicted RBP4.96□□□□□ -1.62
VPS41-203ENST00000395969 HNRNPA0Q13151 305 aaKnown RBP4.96□□□□□ -1.62
VPS41-203ENST00000395969 GPR18Q14330 331 aa4.96□□□□□ -1.62
VPS41-203ENST00000395969 FGFBP1Q14512 234 aa4.96□□□□□ -1.62
VPS41-203ENST00000395969 PUM1Q14671 1186 aaKnown RBP eCLIP4.96□□□□□ -1.62
VPS41-203ENST00000395969 DECR1Q16698 335 aa4.96□□□□□ -1.62
VPS41-203ENST00000395969 PLA1AQ53H76 456 aa4.96□□□□□ -1.62
VPS41-203ENST00000395969 FNDC7Q5VTL7 733 aa4.96□□□□□ -1.62
VPS41-203ENST00000395969 TRIQKQ629K1 86 aa4.96□□□□□ -1.62
VPS41-203ENST00000395969 BICRALQ6AI39 1079 aa4.96□□□□□ -1.62
VPS41-203ENST00000395969 MFSD12Q6NUT3 480 aa4.96□□□□□ -1.62
VPS41-203ENST00000395969 FIGLAQ6QHK4 219 aa4.96□□□□□ -1.62
VPS41-203ENST00000395969 ZNF730Q6ZMV8 503 aa4.96□□□□□ -1.62
VPS41-203ENST00000395969 QSOX2Q6ZRP7 698 aa4.96□□□□□ -1.62
VPS41-203ENST00000395969 OOSP2Q86WS3 158 aa4.96□□□□□ -1.62
VPS41-203ENST00000395969 PM20D2Q8IYS1 436 aa4.96□□□□□ -1.62
VPS41-203ENST00000395969 SLC34A3Q8N130 599 aa4.96□□□□□ -1.62
VPS41-203ENST00000395969 MS4A15Q8N5U1 240 aa4.96□□□□□ -1.62
VPS41-203ENST00000395969 SLC5A8Q8N695 610 aa4.96□□□□□ -1.62
VPS41-203ENST00000395969 ZNF740Q8NDX6 193 aa4.96□□□□□ -1.62
VPS41-203ENST00000395969 OR13H1Q8NG92 308 aa4.96□□□□□ -1.62
VPS41-203ENST00000395969 TMEM163Q8TC26 289 aa4.96□□□□□ -1.62
VPS41-203ENST00000395969 SLC9A6Q92581 669 aa4.96□□□□□ -1.62
VPS41-203ENST00000395969 LOXL4Q96JB6 756 aa4.96□□□□□ -1.62
VPS41-203ENST00000395969 GUCD1Q96NT3 240 aa4.96□□□□□ -1.62
VPS41-203ENST00000395969 ZNF607Q96SK3 696 aa4.96□□□□□ -1.62
VPS41-203ENST00000395969 NIPSNAP1Q9BPW8 284 aa4.96□□□□□ -1.62
VPS41-203ENST00000395969 WACQ9BTA9 647 aa4.96□□□□□ -1.62
VPS41-203ENST00000395969 DPCDQ9BVM2 203 aaPredicted RBP4.96□□□□□ -1.62
VPS41-203ENST00000395969 ZNF416Q9BWM5 594 aa4.96□□□□□ -1.62
VPS41-203ENST00000395969 SRMSQ9H3Y6 488 aa4.96□□□□□ -1.62
VPS41-203ENST00000395969 ZNF768Q9H5H4 540 aaKnown RBP4.96□□□□□ -1.62
VPS41-203ENST00000395969 C6orf106Q9H6K1 298 aaPredicted RBP4.96□□□□□ -1.62
VPS41-203ENST00000395969 ANKRA2Q9H9E1 313 aa4.96□□□□□ -1.62
VPS41-203ENST00000395969 C14orf105Q9NVL8 296 aa4.96□□□□□ -1.62
VPS41-203ENST00000395969 SLC39A1Q9NY26 324 aa4.96□□□□□ -1.62
VPS41-203ENST00000395969 NLGN3Q9NZ94 848 aa4.96□□□□□ -1.62
VPS41-203ENST00000395969 MALT1Q9UDY8 824 aa4.96□□□□□ -1.62
VPS41-203ENST00000395969 A4GNTQ9UNA3 340 aa4.96□□□□□ -1.62
VPS41-203ENST00000395969 SSR3Q9UNL2 185 aa4.96□□□□□ -1.62
VPS41-203ENST00000395969 B3GALT1Q9Y5Z6 326 aa4.96□□□□□ -1.62
VPS41-203ENST00000395969 TBC1D3DA0A087WVF3 549 aa4.96□□□□□ -1.62
VPS41-203ENST00000395969 TBC1D3IA0A087WXS9 549 aa4.96□□□□□ -1.62
VPS41-203ENST00000395969 TBC1D3EA0A087X179 549 aa4.96□□□□□ -1.62
VPS41-203ENST00000395969 A0A1W2PPL8 197 aa4.96□□□□□ -1.62
VPS41-203ENST00000395969 A0A1W2PQD3 144 aa4.96□□□□□ -1.62
VPS41-203ENST00000395969 SLC22A23A1A5C7 686 aa4.96□□□□□ -1.62
VPS41-203ENST00000395969 TBC1D3LB9A6J9 549 aa4.96□□□□□ -1.62
VPS41-203ENST00000395969 KRBOX1C9JBD0 128 aa4.96□□□□□ -1.62
VPS41-203ENST00000395969 TLR4O00206 839 aa4.96□□□□□ -1.62
VPS41-203ENST00000395969 CTSVO60911 334 aa4.96□□□□□ -1.62
VPS41-203ENST00000395969 CCNB2O95067 398 aa4.96□□□□□ -1.62
VPS41-203ENST00000395969 SLC34A2O95436 690 aa4.96□□□□□ -1.62
VPS41-203ENST00000395969 CFDP00746 253 aaPredicted RBP4.96□□□□□ -1.62
VPS41-203ENST00000395969 HBQ1P09105 142 aa4.96□□□□□ -1.62
VPS41-203ENST00000395969 SLC35G6P0C7Q6 338 aa4.96□□□□□ -1.62
VPS41-203ENST00000395969 TBC1D3HP0C7X1 549 aa4.96□□□□□ -1.62
VPS41-203ENST00000395969 NR2F6P10588 404 aa4.96□□□□□ -1.62
VPS41-203ENST00000395969 CKMT1AP12532 417 aa4.96□□□□□ -1.62
VPS41-203ENST00000395969 NTSP30990 170 aa4.96□□□□□ -1.62
VPS41-203ENST00000395969 CDK5Q00535 292 aa4.96□□□□□ -1.62
VPS41-203ENST00000395969 FLI1Q01543 452 aaPredicted RBP4.96□□□□□ -1.62
VPS41-203ENST00000395969 P2RY14Q15391 338 aa4.96□□□□□ -1.62
VPS41-203ENST00000395969 SHBQ15464 509 aa4.96□□□□□ -1.62
VPS41-203ENST00000395969 SPHARQ15513 63 aa4.96□□□□□ -1.62
VPS41-203ENST00000395969 NHLRC3Q5JS37 347 aa4.96□□□□□ -1.62
VPS41-203ENST00000395969 CD276Q5ZPR3 534 aa4.96□□□□□ -1.62
VPS41-203ENST00000395969 TBC1D3CQ6IPX1 549 aa4.96□□□□□ -1.62
VPS41-203ENST00000395969 PLBD1Q6P4A8 553 aa4.96□□□□□ -1.62
VPS41-203ENST00000395969 C17orf107Q6ZR85 190 aa4.96□□□□□ -1.62
VPS41-203ENST00000395969 C6orf120Q7Z4R8 191 aa4.96□□□□□ -1.62
VPS41-203ENST00000395969 SLITRK4Q8IW52 837 aa4.96□□□□□ -1.62
VPS41-203ENST00000395969 SLC44A2Q8IWA5 706 aaPredicted RBP4.96□□□□□ -1.62
VPS41-203ENST00000395969 TBC1D3Q8IZP1 549 aaPredicted RBP4.96□□□□□ -1.62
VPS41-203ENST00000395969 LRRC25Q8N386 305 aaPredicted RBP4.96□□□□□ -1.62
VPS41-203ENST00000395969 NANOGP1Q8N7R0 232 aa4.96□□□□□ -1.62
VPS41-203ENST00000395969 C19orf47Q8N9M1 422 aaKnown RBP4.96□□□□□ -1.62
VPS41-203ENST00000395969 POGLUT1Q8NBL1 392 aa4.96□□□□□ -1.62
VPS41-203ENST00000395969 LCN9Q8WX39 176 aa4.96□□□□□ -1.62
VPS41-203ENST00000395969 KLHDC7BQ96G42 594 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms