RNA–Protein interactions for RNA: ENST00000395896.8

VPS13C-203, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 14,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-203ENST00000395896 ST6GAL1P15907 406 aa3.14□□□□□ -1.91
VPS13C-203ENST00000395896 RIDAP52758 137 aaKnown RBP3.14□□□□□ -1.91
VPS13C-203ENST00000395896 BTBD16Q32M84 506 aa3.14□□□□□ -1.91
VPS13C-203ENST00000395896 SLC25A30Q5SVS4 291 aa3.14□□□□□ -1.91
VPS13C-203ENST00000395896 MED25Q71SY5 747 aa3.14□□□□□ -1.91
VPS13C-203ENST00000395896 MEIOBQ8N635 442 aa3.14□□□□□ -1.91
VPS13C-203ENST00000395896 OR52N1Q8NH53 320 aa3.14□□□□□ -1.91
VPS13C-203ENST00000395896 HAVCR1Q96D42 359 aa3.14□□□□□ -1.91
VPS13C-203ENST00000395896 MAN2C1Q9NTJ4 1040 aa3.14□□□□□ -1.91
VPS13C-203ENST00000395896 AASSQ9UDR5 926 aa3.14□□□□□ -1.91
VPS13C-203ENST00000395896 YBX2Q9Y2T7 364 aaKnown RBP3.14□□□□□ -1.91
VPS13C-203ENST00000395896 WIF1Q9Y5W5 379 aa3.14□□□□□ -1.91
VPS13C-203ENST00000395896 OTOL1A6NHN0 477 aaPredicted RBP3.14□□□□□ -1.91
VPS13C-203ENST00000395896 GSTT2P0CG29 244 aa3.14□□□□□ -1.91
VPS13C-203ENST00000395896 ATXN8OSP0DMR3 200 aa3.14□□□□□ -1.91
VPS13C-203ENST00000395896 SCAND1P57086 179 aa3.14□□□□□ -1.91
VPS13C-203ENST00000395896 PMS2P3Q13401 168 aa3.14□□□□□ -1.91
VPS13C-203ENST00000395896 CAMK2DQ13557 499 aa3.14□□□□□ -1.91
VPS13C-203ENST00000395896 GPR176Q14439 515 aa3.14□□□□□ -1.91
VPS13C-203ENST00000395896 SLX4IPQ5VYV7 408 aa3.14□□□□□ -1.91
VPS13C-203ENST00000395896 GLT8D1Q68CQ7 371 aa3.14□□□□□ -1.91
VPS13C-203ENST00000395896 FIP1L1Q6UN15 594 aaKnown RBP3.14□□□□□ -1.91
VPS13C-203ENST00000395896 FAM131AQ6UXB0 335 aa3.14□□□□□ -1.91
VPS13C-203ENST00000395896 RFLNAQ6ZTI6 216 aa3.14□□□□□ -1.91
VPS13C-203ENST00000395896 UBE2Q1Q7Z7E8 422 aa3.14□□□□□ -1.91
VPS13C-203ENST00000395896 ZNF227Q86WZ6 799 aa3.14□□□□□ -1.91
VPS13C-203ENST00000395896 SYS1Q8N2H4 156 aa3.14□□□□□ -1.91
VPS13C-203ENST00000395896 FBXL6Q8N531 539 aa3.14□□□□□ -1.91
VPS13C-203ENST00000395896 NKAIN3Q8N8D7 197 aa3.14□□□□□ -1.91
VPS13C-203ENST00000395896 TMEM178AQ8NBL3 297 aa3.14□□□□□ -1.91
VPS13C-203ENST00000395896 CHDHQ8NE62 594 aaPredicted RBP3.14□□□□□ -1.91
VPS13C-203ENST00000395896 OR2A14Q96R47 310 aa3.14□□□□□ -1.91
VPS13C-203ENST00000395896 C6orf106Q9H6K1 298 aaPredicted RBP3.14□□□□□ -1.91
VPS13C-203ENST00000395896 TOR4AQ9NXH8 423 aa3.14□□□□□ -1.91
VPS13C-203ENST00000395896 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa3.14□□□□□ -1.91
VPS13C-203ENST00000395896 TRBV2A0A0J9YWF9 115 aa3.14□□□□□ -1.91
VPS13C-203ENST00000395896 ARHGAP33O14559 1287 aa3.14□□□□□ -1.91
VPS13C-203ENST00000395896 LDB3O75112 727 aa3.14□□□□□ -1.91
VPS13C-203ENST00000395896 ETHE1O95571 254 aa3.14□□□□□ -1.91
VPS13C-203ENST00000395896 SCG5P05408 212 aa3.14□□□□□ -1.91
VPS13C-203ENST00000395896 ZNF883P0CG24 379 aa3.14□□□□□ -1.91
VPS13C-203ENST00000395896 PRKCAP17252 672 aa3.14□□□□□ -1.91
VPS13C-203ENST00000395896 ADH7P40394 386 aa3.14□□□□□ -1.91
VPS13C-203ENST00000395896 TSPAN7P41732 249 aa3.14□□□□□ -1.91
VPS13C-203ENST00000395896 YIF1BQ5BJH7 314 aa3.14□□□□□ -1.91
VPS13C-203ENST00000395896 C1orf210Q8IVY1 113 aa3.14□□□□□ -1.91
VPS13C-203ENST00000395896 TMEFF1Q8IYR6 380 aa3.14□□□□□ -1.91
VPS13C-203ENST00000395896 LINC01555Q8NAE3 123 aa3.14□□□□□ -1.91
VPS13C-203ENST00000395896 GPR148Q8TDV2 347 aa3.14□□□□□ -1.91
VPS13C-203ENST00000395896 YIPF4Q9BSR8 244 aa3.14□□□□□ -1.91
VPS13C-203ENST00000395896 CST11Q9H112 138 aa3.14□□□□□ -1.91
VPS13C-203ENST00000395896 S1PR5Q9H228 398 aa3.14□□□□□ -1.91
VPS13C-203ENST00000395896 ATP13A2Q9NQ11 1180 aa3.14□□□□□ -1.91
VPS13C-203ENST00000395896 ACER3Q9NUN7 267 aa3.14□□□□□ -1.91
VPS13C-203ENST00000395896 ABRACLQ9P1F3 81 aa3.14□□□□□ -1.91
VPS13C-203ENST00000395896 POLQO75417 2590 aa3.14□□□□□ -1.91
VPS13C-203ENST00000395896 CHD3Q12873 2000 aaKnown RBP3.14□□□□□ -1.91
VPS13C-203ENST00000395896 DNAH14Q0VDD8 3507 aa3.14□□□□□ -1.91
VPS13C-203ENST00000395896 IGHV1OR15-9A0A0B4J2B8 117 aa3.14□□□□□ -1.91
VPS13C-203ENST00000395896 TMEM212A6NML5 194 aa3.14□□□□□ -1.91
VPS13C-203ENST00000395896 H0YC42 278 aa3.14□□□□□ -1.91
VPS13C-203ENST00000395896 SLC19A2O60779 497 aa3.14□□□□□ -1.91
VPS13C-203ENST00000395896 SULT1C4O75897 302 aa3.14□□□□□ -1.91
VPS13C-203ENST00000395896 FCARP24071 287 aa3.14□□□□□ -1.91
VPS13C-203ENST00000395896 RPS26P62854 115 aaKnown RBP3.14□□□□□ -1.91
VPS13C-203ENST00000395896 EIF5AP63241 154 aaKnown RBP3.14□□□□□ -1.91
VPS13C-203ENST00000395896 MEP1AQ16819 746 aa3.14□□□□□ -1.91
VPS13C-203ENST00000395896 RPL22L1Q6P5R6 122 aaKnown RBP3.14□□□□□ -1.91
VPS13C-203ENST00000395896 LILRA2Q8N149 483 aa3.14□□□□□ -1.91
VPS13C-203ENST00000395896 LRRC17Q8N6Y2 441 aa3.14□□□□□ -1.91
VPS13C-203ENST00000395896 PNPLA1Q8N8W4 532 aa3.14□□□□□ -1.91
VPS13C-203ENST00000395896 ATP6V1C2Q8NEY4 427 aa3.14□□□□□ -1.91
VPS13C-203ENST00000395896 GRHL3Q8TE85 626 aa3.14□□□□□ -1.91
VPS13C-203ENST00000395896 CCDC107Q8WV48 283 aa3.14□□□□□ -1.91
VPS13C-203ENST00000395896 NANOS1Q8WY41 292 aaKnown RBP3.14□□□□□ -1.91
VPS13C-203ENST00000395896 RNF31Q96EP0 1072 aa3.14□□□□□ -1.91
VPS13C-203ENST00000395896 TM7SF3Q9NS93 570 aa3.14□□□□□ -1.91
VPS13C-203ENST00000395896 ASB1Q9Y576 335 aa3.14□□□□□ -1.91
VPS13C-203ENST00000395896 C12orf71A8MTZ7 269 aa3.14□□□□□ -1.91
VPS13C-203ENST00000395896 RAB40ALP0C0E4 278 aa3.14□□□□□ -1.91
VPS13C-203ENST00000395896 EPHA8P29322 1005 aaPredicted RBP3.14□□□□□ -1.91
VPS13C-203ENST00000395896 PYCR1P32322 319 aa3.14□□□□□ -1.91
VPS13C-203ENST00000395896 P2RX1P51575 399 aa3.14□□□□□ -1.91
VPS13C-203ENST00000395896 NXPH1P58417 271 aa3.14□□□□□ -1.91
VPS13C-203ENST00000395896 MZT1Q08AG7 82 aa3.14□□□□□ -1.91
VPS13C-203ENST00000395896 PPP1R8Q12972 351 aaKnown RBP3.14□□□□□ -1.91
VPS13C-203ENST00000395896 SELENBP1Q13228 472 aa3.14□□□□□ -1.91
VPS13C-203ENST00000395896 GAB1Q13480 694 aa3.14□□□□□ -1.91
VPS13C-203ENST00000395896 PTPRRQ15256 657 aa3.14□□□□□ -1.91
VPS13C-203ENST00000395896 OR52H1Q8NGJ2 320 aa3.14□□□□□ -1.91
VPS13C-203ENST00000395896 OR5D14Q8NGL3 314 aa3.14□□□□□ -1.91
VPS13C-203ENST00000395896 STT3BQ8TCJ2 826 aa3.14□□□□□ -1.91
VPS13C-203ENST00000395896 RHBDD1Q8TEB9 315 aa3.14□□□□□ -1.91
VPS13C-203ENST00000395896 CREB3L4Q8TEY5 395 aa3.14□□□□□ -1.91
VPS13C-203ENST00000395896 RAB40AQ8WXH6 277 aa3.14□□□□□ -1.91
VPS13C-203ENST00000395896 ULBP3Q9BZM4 244 aa3.14□□□□□ -1.91
VPS13C-203ENST00000395896 SPRTNQ9H040 489 aaPredicted RBP3.14□□□□□ -1.91
VPS13C-203ENST00000395896 C2orf42Q9NWW7 574 aa3.14□□□□□ -1.91
VPS13C-203ENST00000395896 ZNF443Q9Y2A4 671 aaPredicted RBP3.14□□□□□ -1.91
VPS13C-203ENST00000395896 JMJD1CQ15652 2540 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms