RNA–Protein interactions for RNA: ENST00000395060.5

CLIP2-203, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP2, Length 3,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-203ENST00000395060 CAMK1GQ96NX5 476 aa13.26□□□□□ -0.29
CLIP2-203ENST00000395060 UBL7Q96S82 380 aaPredicted RBP13.26□□□□□ -0.29
CLIP2-203ENST00000395060 HIDE1A8MVS5 230 aa13.26□□□□□ -0.29
CLIP2-203ENST00000395060 SPINT1O43278 529 aa13.26□□□□□ -0.29
CLIP2-203ENST00000395060 UBL3O95164 117 aa13.26□□□□□ -0.29
CLIP2-203ENST00000395060 HMGN1P05114 100 aa13.26□□□□□ -0.29
CLIP2-203ENST00000395060 EPXP11678 715 aa13.26□□□□□ -0.29
CLIP2-203ENST00000395060 WASP42768 502 aa13.26□□□□□ -0.29
CLIP2-203ENST00000395060 SOX2P48431 317 aa13.26□□□□□ -0.29
CLIP2-203ENST00000395060 BTN3A2P78410 334 aa13.26□□□□□ -0.29
CLIP2-203ENST00000395060 SLC7A9P82251 487 aa13.26□□□□□ -0.29
CLIP2-203ENST00000395060 PRR5P85299 388 aa13.26□□□□□ -0.29
CLIP2-203ENST00000395060 GNA13Q14344 377 aa13.26□□□□□ -0.29
CLIP2-203ENST00000395060 PLPP4Q5VZY2 271 aa13.26□□□□□ -0.29
CLIP2-203ENST00000395060 ANKRD33Q7Z3H0 272 aa13.26□□□□□ -0.29
CLIP2-203ENST00000395060 GPAT4Q86UL3 456 aa13.26□□□□□ -0.29
CLIP2-203ENST00000395060 C12orf40Q86WS4 652 aa13.26□□□□□ -0.29
CLIP2-203ENST00000395060 KCT2Q8NC54 265 aa13.26□□□□□ -0.29
CLIP2-203ENST00000395060 OR2L2Q8NH16 312 aa13.26□□□□□ -0.29
CLIP2-203ENST00000395060 OR56B4Q8NH76 319 aa13.26□□□□□ -0.29
CLIP2-203ENST00000395060 SETD7Q8WTS6 366 aaKnown RBP13.26□□□□□ -0.29
CLIP2-203ENST00000395060 ARRDC3Q96B67 414 aa13.26□□□□□ -0.29
CLIP2-203ENST00000395060 HRASLSQ9HDD0 168 aa13.26□□□□□ -0.29
CLIP2-203ENST00000395060 PRDM9Q9NQV7 894 aa13.26□□□□□ -0.29
CLIP2-203ENST00000395060 LAG3P18627 525 aa13.25□□□□□ -0.29
CLIP2-203ENST00000395060 CSNK2A2P19784 350 aaPredicted RBP13.25□□□□□ -0.29
CLIP2-203ENST00000395060 ST8SIA6P61647 398 aa13.25□□□□□ -0.29
CLIP2-203ENST00000395060 FOXK2Q01167 660 aa13.25□□□□□ -0.29
CLIP2-203ENST00000395060 ZNF85Q03923 595 aa13.25□□□□□ -0.29
CLIP2-203ENST00000395060 STK11Q15831 433 aa13.25□□□□□ -0.29
CLIP2-203ENST00000395060 LSM14AQ8ND56 463 aaKnown RBP13.25□□□□□ -0.29
CLIP2-203ENST00000395060 OR5M1Q8NGP8 315 aa13.25□□□□□ -0.29
CLIP2-203ENST00000395060 ZNF707Q96C28 371 aaPredicted RBP13.25□□□□□ -0.29
CLIP2-203ENST00000395060 PPP1R16AQ96I34 528 aa13.25□□□□□ -0.29
CLIP2-203ENST00000395060 DMRTA2Q96SC8 542 aa13.25□□□□□ -0.29
CLIP2-203ENST00000395060 NOX3Q9HBY0 568 aa13.25□□□□□ -0.29
CLIP2-203ENST00000395060 NFKBIL1Q9UBC1 381 aaPredicted RBP13.25□□□□□ -0.29
CLIP2-203ENST00000395060 POMT2Q9UKY4 750 aa13.25□□□□□ -0.29
CLIP2-203ENST00000395060 A0A0A6YYD5 115 aa13.25□□□□□ -0.29
CLIP2-203ENST00000395060 TRBV2A0A0J9YWF9 115 aa13.25□□□□□ -0.29
CLIP2-203ENST00000395060 CASC3O15234 703 aaKnown RBP13.25□□□□□ -0.29
CLIP2-203ENST00000395060 DNAJB6O75190 326 aa13.25□□□□□ -0.29
CLIP2-203ENST00000395060 SLC35G4P0C7Q5 338 aa13.25□□□□□ -0.29
CLIP2-203ENST00000395060 EDNRAP25101 427 aa13.25□□□□□ -0.29
CLIP2-203ENST00000395060 GDI2P50395 445 aaKnown RBP13.25□□□□□ -0.29
CLIP2-203ENST00000395060 DEFA5Q01523 94 aa13.25□□□□□ -0.29
CLIP2-203ENST00000395060 KCNAB1Q14722 419 aa13.25□□□□□ -0.29
CLIP2-203ENST00000395060 LINC00303Q3SY05 128 aa13.25□□□□□ -0.29
CLIP2-203ENST00000395060 FNDC3BQ53EP0 1204 aaKnown RBP13.25□□□□□ -0.29
CLIP2-203ENST00000395060 FAM74A1Q5RGS3 127 aa13.25□□□□□ -0.29
CLIP2-203ENST00000395060 FAM122CQ6P4D5 195 aa13.25□□□□□ -0.29
CLIP2-203ENST00000395060 OR6K6Q8NGW6 343 aa13.25□□□□□ -0.29
CLIP2-203ENST00000395060 LHFPL5Q8TAF8 219 aa13.25□□□□□ -0.29
CLIP2-203ENST00000395060 KISS1RQ969F8 398 aaPredicted RBP13.25□□□□□ -0.29
CLIP2-203ENST00000395060 NXPE3Q969Y0 559 aa13.25□□□□□ -0.29
CLIP2-203ENST00000395060 PGLYRP3Q96LB9 341 aa13.25□□□□□ -0.29
CLIP2-203ENST00000395060 SAV1Q9H4B6 383 aaPredicted RBP13.25□□□□□ -0.29
CLIP2-203ENST00000395060 NTMQ9P121 344 aa13.25□□□□□ -0.29
CLIP2-203ENST00000395060 A0A1B0GVI7 797 aa13.24□□□□□ -0.29
CLIP2-203ENST00000395060 ANXA2P2A6NMY6 339 aa13.24□□□□□ -0.29
CLIP2-203ENST00000395060 SBK2P0C263 348 aa13.24□□□□□ -0.29
CLIP2-203ENST00000395060 CCR9P51686 369 aa13.24□□□□□ -0.29
CLIP2-203ENST00000395060 GBX2P52951 348 aaPredicted RBP13.24□□□□□ -0.29
CLIP2-203ENST00000395060 ERVFC1P60507 584 aa13.24□□□□□ -0.29
CLIP2-203ENST00000395060 C2orf68Q2NKX9 166 aa13.24□□□□□ -0.29
CLIP2-203ENST00000395060 ZNF658BQ4V348 819 aaPredicted RBP13.24□□□□□ -0.29
CLIP2-203ENST00000395060 YOD1Q5VVQ6 348 aaPredicted RBP13.24□□□□□ -0.29
CLIP2-203ENST00000395060 HEPHL1Q6MZM0 1159 aa13.24□□□□□ -0.29
CLIP2-203ENST00000395060 ZNF836Q6ZNA1 936 aa13.24□□□□□ -0.29
CLIP2-203ENST00000395060 SPRED2Q7Z698 418 aa13.24□□□□□ -0.29
CLIP2-203ENST00000395060 MRGPREQ86SM8 312 aa13.24□□□□□ -0.29
CLIP2-203ENST00000395060 ADGRG3Q86Y34 549 aa13.24□□□□□ -0.29
CLIP2-203ENST00000395060 FAM98AQ8NCA5 519 aaKnown RBP13.24□□□□□ -0.29
CLIP2-203ENST00000395060 OR7G2Q8NG99 324 aa13.24□□□□□ -0.29
CLIP2-203ENST00000395060 C1orf216Q8TAB5 229 aa13.24□□□□□ -0.29
CLIP2-203ENST00000395060 SNX33Q8WV41 574 aa13.24□□□□□ -0.29
CLIP2-203ENST00000395060 ELP4Q96EB1 424 aa13.24□□□□□ -0.29
CLIP2-203ENST00000395060 PAWRQ96IZ0 340 aaKnown RBP13.24□□□□□ -0.29
CLIP2-203ENST00000395060 BCL2L10Q9HD36 194 aa13.24□□□□□ -0.29
CLIP2-203ENST00000395060 TBX21Q9UL17 535 aa13.24□□□□□ -0.29
CLIP2-203ENST00000395060 BAIAP2Q9UQB8 552 aa13.24□□□□□ -0.29
CLIP2-203ENST00000395060 ZNF443Q9Y2A4 671 aaPredicted RBP13.24□□□□□ -0.29
CLIP2-203ENST00000395060 EYSQ5T1H1 3165 aa13.24□□□□□ -0.29
CLIP2-203ENST00000395060 SNRNP200O75643 2136 aaKnown RBP13.24□□□□□ -0.29
CLIP2-203ENST00000395060 A0A1W2PPV9 198 aa13.24□□□□□ -0.29
CLIP2-203ENST00000395060 OR6C74A6NCV1 312 aa13.24□□□□□ -0.29
CLIP2-203ENST00000395060 KHNYNO15037 678 aaKnown RBP13.24□□□□□ -0.29
CLIP2-203ENST00000395060 TMIGD3P0DMS9 266 aaPredicted RBP13.24□□□□□ -0.29
CLIP2-203ENST00000395060 HIST1H1TP22492 207 aaPredicted RBP13.24□□□□□ -0.29
CLIP2-203ENST00000395060 FRKP42685 505 aaPredicted RBP13.24□□□□□ -0.29
CLIP2-203ENST00000395060 AKR1D1P51857 326 aa13.24□□□□□ -0.29
CLIP2-203ENST00000395060 KLF9Q13886 244 aaPredicted RBP13.24□□□□□ -0.29
CLIP2-203ENST00000395060 C11orf88Q6PI97 169 aa13.24□□□□□ -0.29
CLIP2-203ENST00000395060 OR52E2Q8NGJ4 325 aa13.24□□□□□ -0.29
CLIP2-203ENST00000395060 MARC2Q969Z3 335 aa13.24□□□□□ -0.29
CLIP2-203ENST00000395060 HS6ST2Q96MM7 605 aa13.24□□□□□ -0.29
CLIP2-203ENST00000395060 PTCHD1Q96NR3 888 aa13.24□□□□□ -0.29
CLIP2-203ENST00000395060 SARGQ9BW04 601 aa13.24□□□□□ -0.29
CLIP2-203ENST00000395060 CACYBPQ9HB71 228 aaKnown RBP13.24□□□□□ -0.29
CLIP2-203ENST00000395060 NOX4Q9NPH5 578 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms