RNA–Protein interactions for RNA: ENST00000394872.6

COL4A6-203, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5 BASIC

Gene COL4A6, Length 6,750 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-203ENST00000394872 ZNF264O43296 627 aa9.71□□□□□ -0.86
COL4A6-203ENST00000394872 CAPNS1P04632 268 aa9.71□□□□□ -0.86
COL4A6-203ENST00000394872 DCNP07585 359 aaKnown RBP9.71□□□□□ -0.86
COL4A6-203ENST00000394872 GPR18Q14330 331 aa9.71□□□□□ -0.86
COL4A6-203ENST00000394872 GARNL3Q5VVW2 1013 aa9.71□□□□□ -0.86
COL4A6-203ENST00000394872 SBSNQ6UWP8 590 aa9.71□□□□□ -0.86
COL4A6-203ENST00000394872 GPR149Q86SP6 731 aa9.71□□□□□ -0.86
COL4A6-203ENST00000394872 ARFGAP1Q8N6T3 406 aa9.71□□□□□ -0.86
COL4A6-203ENST00000394872 ACOT11Q8WXI4 607 aaPredicted RBP9.71□□□□□ -0.86
COL4A6-203ENST00000394872 CNOT9Q92600 299 aaKnown RBP9.71□□□□□ -0.86
COL4A6-203ENST00000394872 SDSLQ96GA7 329 aa9.71□□□□□ -0.86
COL4A6-203ENST00000394872 DVL2O14641 736 aa9.71□□□□□ -0.86
COL4A6-203ENST00000394872 CSF1P09603 554 aa9.71□□□□□ -0.86
COL4A6-203ENST00000394872 ALDH3B2P48448 385 aa9.71□□□□□ -0.86
COL4A6-203ENST00000394872 GPR139Q6DWJ6 353 aa9.71□□□□□ -0.86
COL4A6-203ENST00000394872 ALKAL1Q6UXT8 129 aa9.71□□□□□ -0.86
COL4A6-203ENST00000394872 ANKRD13BQ86YJ7 626 aa9.71□□□□□ -0.86
COL4A6-203ENST00000394872 NDNFQ8TB73 568 aa9.71□□□□□ -0.86
COL4A6-203ENST00000394872 VRK1Q99986 396 aaPredicted RBP9.71□□□□□ -0.86
COL4A6-203ENST00000394872 OR2B2Q9GZK3 357 aa9.71□□□□□ -0.86
COL4A6-203ENST00000394872 ALDOBP05062 364 aa9.7□□□□□ -0.86
COL4A6-203ENST00000394872 AKAIN1P0CW23 69 aa9.7□□□□□ -0.86
COL4A6-203ENST00000394872 EDN3P14138 238 aa9.7□□□□□ -0.86
COL4A6-203ENST00000394872 MSR1P21757 451 aa9.7□□□□□ -0.86
COL4A6-203ENST00000394872 SIRPAP78324 504 aa9.7□□□□□ -0.86
COL4A6-203ENST00000394872 CYCSP99999 105 aaKnown RBP9.7□□□□□ -0.86
COL4A6-203ENST00000394872 SYPL1Q16563 259 aa9.7□□□□□ -0.86
COL4A6-203ENST00000394872 FAM26DQ5JW98 314 aa9.7□□□□□ -0.86
COL4A6-203ENST00000394872 MRPL2Q5T653 305 aaKnown RBP9.7□□□□□ -0.86
COL4A6-203ENST00000394872 TPRA1Q86W33 373 aa9.7□□□□□ -0.86
COL4A6-203ENST00000394872 FAM160A2Q8N612 972 aaPredicted RBP9.7□□□□□ -0.86
COL4A6-203ENST00000394872 WDSUB1Q8N9V3 476 aa9.7□□□□□ -0.86
COL4A6-203ENST00000394872 ARRDC2Q8TBH0 407 aa9.7□□□□□ -0.86
COL4A6-203ENST00000394872 RSPRY1Q96DX4 576 aa9.7□□□□□ -0.86
COL4A6-203ENST00000394872 PPIL3Q9H2H8 161 aaKnown RBP9.7□□□□□ -0.86
COL4A6-203ENST00000394872 CALHM2Q9HA72 323 aa9.7□□□□□ -0.86
COL4A6-203ENST00000394872 ZBTB32Q9Y2Y4 487 aaPredicted RBP9.7□□□□□ -0.86
COL4A6-203ENST00000394872 ZNF736B4DX44 427 aaPredicted RBP9.7□□□□□ -0.86
COL4A6-203ENST00000394872 F5H5P2 479 aa9.7□□□□□ -0.86
COL4A6-203ENST00000394872 G3V3Y1 287 aa9.7□□□□□ -0.86
COL4A6-203ENST00000394872 ZNF136P52737 540 aa9.7□□□□□ -0.86
COL4A6-203ENST00000394872 INHBCP55103 352 aa9.7□□□□□ -0.86
COL4A6-203ENST00000394872 TAZQ16635 292 aa9.7□□□□□ -0.86
COL4A6-203ENST00000394872 ZNF322Q6U7Q0 402 aaPredicted RBP9.7□□□□□ -0.86
COL4A6-203ENST00000394872 MEPCEQ7L2J0 689 aaKnown RBP9.7□□□□□ -0.86
COL4A6-203ENST00000394872 GDPD1Q8N9F7 314 aa9.7□□□□□ -0.86
COL4A6-203ENST00000394872 OR4D6Q8NGJ1 314 aa9.7□□□□□ -0.86
COL4A6-203ENST00000394872 MSI2Q96DH6 328 aaKnown RBP9.7□□□□□ -0.86
COL4A6-203ENST00000394872 CLMPQ9H6B4 373 aa9.7□□□□□ -0.86
COL4A6-203ENST00000394872 PAQR5Q9NXK6 330 aaPredicted RBP9.7□□□□□ -0.86
COL4A6-203ENST00000394872 PCDHGA1Q9Y5H4 931 aa9.7□□□□□ -0.86
COL4A6-203ENST00000394872 TMEM269A0A1B0GVZ9 245 aa9.7□□□□□ -0.86
COL4A6-203ENST00000394872 LINC01553A4QN01 128 aa9.7□□□□□ -0.86
COL4A6-203ENST00000394872 H3BNC9 293 aa9.7□□□□□ -0.86
COL4A6-203ENST00000394872 LILRB5O75023 590 aa9.7□□□□□ -0.86
COL4A6-203ENST00000394872 F13BP05160 661 aa9.7□□□□□ -0.86
COL4A6-203ENST00000394872 ATXN1LP0C7T5 689 aaKnown RBP9.7□□□□□ -0.86
COL4A6-203ENST00000394872 CX3CR1P49238 355 aa9.7□□□□□ -0.86
COL4A6-203ENST00000394872 RRAS2P62070 204 aaPredicted RBP9.7□□□□□ -0.86
COL4A6-203ENST00000394872 KCNJ10P78508 379 aa9.7□□□□□ -0.86
COL4A6-203ENST00000394872 LTC4SQ16873 150 aa9.7□□□□□ -0.86
COL4A6-203ENST00000394872 ACSM3Q53FZ2 586 aa9.7□□□□□ -0.86
COL4A6-203ENST00000394872 ESCO2Q56NI9 601 aa9.7□□□□□ -0.86
COL4A6-203ENST00000394872 EXOSC6Q5RKV6 272 aaKnown RBP9.7□□□□□ -0.86
COL4A6-203ENST00000394872 PLAG1Q6DJT9 500 aa9.7□□□□□ -0.86
COL4A6-203ENST00000394872 SERPINA12Q8IW75 414 aa9.7□□□□□ -0.86
COL4A6-203ENST00000394872 FAM83FQ8NEG4 500 aaPredicted RBP9.7□□□□□ -0.86
COL4A6-203ENST00000394872 SLC7A13Q8TCU3 470 aa9.7□□□□□ -0.86
COL4A6-203ENST00000394872 DUSP19Q8WTR2 217 aa9.7□□□□□ -0.86
COL4A6-203ENST00000394872 FOXRED1Q96CU9 486 aaPredicted RBP9.7□□□□□ -0.86
COL4A6-203ENST00000394872 SLC30A3Q99726 388 aa9.7□□□□□ -0.86
COL4A6-203ENST00000394872 MRI1Q9BV20 369 aa9.7□□□□□ -0.86
COL4A6-203ENST00000394872 TESQ9UGI8 421 aaKnown RBP9.7□□□□□ -0.86
COL4A6-203ENST00000394872 RGPD5Q99666 1765 aa9.7□□□□□ -0.86
COL4A6-203ENST00000394872 AP1G1O43747 822 aa9.7□□□□□ -0.86
COL4A6-203ENST00000394872 SORBS2O94875 1100 aaKnown RBP9.7□□□□□ -0.86
COL4A6-203ENST00000394872 CNIH2Q6PI25 160 aa9.7□□□□□ -0.86
COL4A6-203ENST00000394872 PDZD9Q8IXQ8 264 aa9.7□□□□□ -0.86
COL4A6-203ENST00000394872 B3GNT7Q8NFL0 401 aa9.7□□□□□ -0.86
COL4A6-203ENST00000394872 ZNF566Q969W8 418 aa9.7□□□□□ -0.86
COL4A6-203ENST00000394872 HS3ST2Q9Y278 367 aa9.7□□□□□ -0.86
COL4A6-203ENST00000394872 SLC22A5O76082 557 aa9.7□□□□□ -0.86
COL4A6-203ENST00000394872 IFNA10P01566 189 aa9.7□□□□□ -0.86
COL4A6-203ENST00000394872 SPOCK1Q08629 439 aa9.7□□□□□ -0.86
COL4A6-203ENST00000394872 KRBOX4Q5JUW0 171 aa9.7□□□□□ -0.86
COL4A6-203ENST00000394872 DPY19L2P1Q6NXN4 242 aa9.7□□□□□ -0.86
COL4A6-203ENST00000394872 AAED1Q7RTV5 226 aa9.7□□□□□ -0.86
COL4A6-203ENST00000394872 GTPBP8Q8N3Z3 284 aaPredicted RBP9.7□□□□□ -0.86
COL4A6-203ENST00000394872 ZFPM2Q8WW38 1151 aa9.7□□□□□ -0.86
COL4A6-203ENST00000394872 SEMA6CQ9H3T2 930 aa9.7□□□□□ -0.86
COL4A6-203ENST00000394872 MARCH5Q9NX47 278 aa9.7□□□□□ -0.86
COL4A6-203ENST00000394872 HHLA2Q9UM44 414 aa9.7□□□□□ -0.86
COL4A6-203ENST00000394872 CCDC163A0A0D9SF12 145 aa9.69□□□□□ -0.86
COL4A6-203ENST00000394872 TPPPO94811 219 aa9.69□□□□□ -0.86
COL4A6-203ENST00000394872 SLC6A19Q695T7 634 aa9.69□□□□□ -0.86
COL4A6-203ENST00000394872 ADAMTSL4Q6UY14 1074 aa9.69□□□□□ -0.86
COL4A6-203ENST00000394872 SPPL3Q8TCT6 385 aa9.69□□□□□ -0.86
COL4A6-203ENST00000394872 PSMF1Q92530 271 aa9.69□□□□□ -0.86
COL4A6-203ENST00000394872 ELOVL3Q9HB03 270 aa9.69□□□□□ -0.86
COL4A6-203ENST00000394872 SPHK1Q9NYA1 384 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms