RNA–Protein interactions for RNA: ENST00000394633.7

PCDHA1-202, Transcript of protocadherin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene PCDHA1, Length 2,204 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-202ENST00000394633 CCDC28AQ8IWP9 274 aa16.94■□□□□ 0.3
PCDHA1-202ENST00000394633 TOMM5Q8N4H5 51 aa16.94■□□□□ 0.3
PCDHA1-202ENST00000394633 RFLNBQ8N5W9 214 aa16.94■□□□□ 0.3
PCDHA1-202ENST00000394633 SUN5Q8TC36 379 aa16.94■□□□□ 0.3
PCDHA1-202ENST00000394633 HAVCR2Q8TDQ0 301 aa16.94■□□□□ 0.3
PCDHA1-202ENST00000394633 GHSRQ92847 366 aa16.94■□□□□ 0.3
PCDHA1-202ENST00000394633 KIR3DX1Q9H7L2 352 aa16.94■□□□□ 0.3
PCDHA1-202ENST00000394633 MEPEQ9NQ76 525 aaPredicted RBP16.94■□□□□ 0.3
PCDHA1-202ENST00000394633 ST6GALNAC2Q9UJ37 374 aa16.94■□□□□ 0.3
PCDHA1-202ENST00000394633 A0A0C4DFX4 3053 aa16.94■□□□□ 0.3
PCDHA1-202ENST00000394633 LOC105369274A0A096LPK9 316 aa16.94■□□□□ 0.3
PCDHA1-202ENST00000394633 A0A1W2PRG6 482 aa16.94■□□□□ 0.3
PCDHA1-202ENST00000394633 RIIAD1A6NNX1 92 aa16.94■□□□□ 0.3
PCDHA1-202ENST00000394633 STX11O75558 287 aa16.94■□□□□ 0.3
PCDHA1-202ENST00000394633 PPP1R3DO95685 299 aa16.94■□□□□ 0.3
PCDHA1-202ENST00000394633 SYPP08247 313 aa16.94■□□□□ 0.3
PCDHA1-202ENST00000394633 SAGP10523 405 aaPredicted RBP16.94■□□□□ 0.3
PCDHA1-202ENST00000394633 ANXA3P12429 323 aa16.94■□□□□ 0.3
PCDHA1-202ENST00000394633 SNRPBP14678 240 aaKnown RBP16.94■□□□□ 0.3
PCDHA1-202ENST00000394633 PYCR1P32322 319 aa16.94■□□□□ 0.3
PCDHA1-202ENST00000394633 RPS15AP62244 130 aaKnown RBP16.94■□□□□ 0.3
PCDHA1-202ENST00000394633 FHL5Q5TD97 284 aa16.94■□□□□ 0.3
PCDHA1-202ENST00000394633 OR4N4Q8N0Y3 316 aa16.94■□□□□ 0.3
PCDHA1-202ENST00000394633 SLC44A3Q8N4M1 653 aa16.94■□□□□ 0.3
PCDHA1-202ENST00000394633 TEX19Q8NA77 164 aa16.94■□□□□ 0.3
PCDHA1-202ENST00000394633 OR51A7Q8NH64 312 aa16.94■□□□□ 0.3
PCDHA1-202ENST00000394633 NT5CQ8TCD5 201 aa16.94■□□□□ 0.3
PCDHA1-202ENST00000394633 RSPH9Q9H1X1 276 aaPredicted RBP16.94■□□□□ 0.3
PCDHA1-202ENST00000394633 ADAP2Q9NPF8 381 aa16.94■□□□□ 0.3
PCDHA1-202ENST00000394633 TMEM5Q9Y2B1 443 aa16.94■□□□□ 0.3
PCDHA1-202ENST00000394633 NPFFR2Q9Y5X5 522 aa16.94■□□□□ 0.3
PCDHA1-202ENST00000394633 TBC1D3EA0A087X179 549 aa16.93■□□□□ 0.3
PCDHA1-202ENST00000394633 SYNDIG1LA6NDD5 238 aa16.93■□□□□ 0.3
PCDHA1-202ENST00000394633 P2RX6O15547 441 aa16.93■□□□□ 0.3
PCDHA1-202ENST00000394633 HYAL3O43820 417 aaPredicted RBP16.93■□□□□ 0.3
PCDHA1-202ENST00000394633 UBL3O95164 117 aa16.93■□□□□ 0.3
PCDHA1-202ENST00000394633 CPMP14384 443 aa16.93■□□□□ 0.3
PCDHA1-202ENST00000394633 SDHBP21912 280 aa16.93■□□□□ 0.3
PCDHA1-202ENST00000394633 IGFALSP35858 605 aa16.93■□□□□ 0.3
PCDHA1-202ENST00000394633 NUDT1P36639 197 aa16.93■□□□□ 0.3
PCDHA1-202ENST00000394633 MMP15P51511 669 aa16.93■□□□□ 0.3
PCDHA1-202ENST00000394633 CCR6P51684 374 aa16.93■□□□□ 0.3
PCDHA1-202ENST00000394633 PLAURQ03405 335 aa16.93■□□□□ 0.3
PCDHA1-202ENST00000394633 SMAD4Q13485 552 aaKnown RBP16.93■□□□□ 0.3
PCDHA1-202ENST00000394633 AMZ1Q400G9 498 aa16.93■□□□□ 0.3
PCDHA1-202ENST00000394633 EXOSC6Q5RKV6 272 aaKnown RBP16.93■□□□□ 0.3
PCDHA1-202ENST00000394633 TEX261Q6UWH6 196 aa16.93■□□□□ 0.3
PCDHA1-202ENST00000394633 BMP8AQ7Z5Y6 402 aa16.93■□□□□ 0.3
PCDHA1-202ENST00000394633 SYT9Q86SS6 491 aa16.93■□□□□ 0.3
PCDHA1-202ENST00000394633 CDK20Q8IZL9 346 aa16.93■□□□□ 0.3
PCDHA1-202ENST00000394633 SHISA5Q8N114 240 aa16.93■□□□□ 0.3
PCDHA1-202ENST00000394633 MS4A3Q96HJ5 214 aa16.93■□□□□ 0.3
PCDHA1-202ENST00000394633 SMAD5Q99717 465 aaKnown RBP16.93■□□□□ 0.3
PCDHA1-202ENST00000394633 CACNG6Q9BXT2 260 aa16.93■□□□□ 0.3
PCDHA1-202ENST00000394633 TTTY10Q9BZA0 68 aa16.93■□□□□ 0.3
PCDHA1-202ENST00000394633 C19orf53Q9UNZ5 99 aaPredicted RBP16.93■□□□□ 0.3
PCDHA1-202ENST00000394633 MED31Q9Y3C7 131 aa16.93■□□□□ 0.3
PCDHA1-202ENST00000394633 PIAS3Q9Y6X2 628 aa16.93■□□□□ 0.3
PCDHA1-202ENST00000394633 U3KQ87 197 aa16.93■□□□□ 0.3
PCDHA1-202ENST00000394633 A0A1W2PPK0 400 aa16.93■□□□□ 0.3
PCDHA1-202ENST00000394633 MEN1O00255 615 aa16.93■□□□□ 0.3
PCDHA1-202ENST00000394633 PTP4A3O75365 173 aa16.93■□□□□ 0.3
PCDHA1-202ENST00000394633 SLC22A5O76082 557 aa16.93■□□□□ 0.3
PCDHA1-202ENST00000394633 EML2O95834 649 aa16.93■□□□□ 0.3
PCDHA1-202ENST00000394633 EGFP01133 1207 aa16.93■□□□□ 0.3
PCDHA1-202ENST00000394633 ENPP2Q13822 863 aa16.93■□□□□ 0.3
PCDHA1-202ENST00000394633 DEFB134Q4QY38 66 aa16.93■□□□□ 0.3
PCDHA1-202ENST00000394633 FBXO42Q6P3S6 717 aa16.93■□□□□ 0.3
PCDHA1-202ENST00000394633 ESPNLQ6ZVH7 1005 aa16.93■□□□□ 0.3
PCDHA1-202ENST00000394633 USP53Q70EK8 1073 aa16.93■□□□□ 0.3
PCDHA1-202ENST00000394633 SAMD14Q8IZD0 417 aaPredicted RBP16.93■□□□□ 0.3
PCDHA1-202ENST00000394633 ZFP3Q96NJ6 502 aa16.93■□□□□ 0.3
PCDHA1-202ENST00000394633 CDX2Q99626 313 aaPredicted RBP16.93■□□□□ 0.3
PCDHA1-202ENST00000394633 HEXA-AS1Q9H8Q6 139 aa16.93■□□□□ 0.3
PCDHA1-202ENST00000394633 TPOP07202 933 aa16.92■□□□□ 0.3
PCDHA1-202ENST00000394633 SMIM10L1P0DMW3 83 aa16.92■□□□□ 0.3
PCDHA1-202ENST00000394633 HCCSP53701 268 aa16.92■□□□□ 0.3
PCDHA1-202ENST00000394633 TCEA2Q15560 299 aa16.92■□□□□ 0.3
PCDHA1-202ENST00000394633 MS4A15Q8N5U1 240 aa16.92■□□□□ 0.3
PCDHA1-202ENST00000394633 ZNF680Q8NEM1 530 aa16.92■□□□□ 0.3
PCDHA1-202ENST00000394633 OR51Q1Q8NH59 317 aa16.92■□□□□ 0.3
PCDHA1-202ENST00000394633 OR4C6Q8NH72 309 aa16.92■□□□□ 0.3
PCDHA1-202ENST00000394633 LCN9Q8WX39 176 aa16.92■□□□□ 0.3
PCDHA1-202ENST00000394633 ADAMTS14Q8WXS8 1223 aa16.92■□□□□ 0.3
PCDHA1-202ENST00000394633 SMIM10Q96HG1 83 aa16.92■□□□□ 0.3
PCDHA1-202ENST00000394633 SERINC2Q96SA4 455 aa16.92■□□□□ 0.3
PCDHA1-202ENST00000394633 HAO2Q9NYQ3 351 aa16.92■□□□□ 0.3
PCDHA1-202ENST00000394633 USP36Q9P275 1121 aaKnown RBP16.92■□□□□ 0.3
PCDHA1-202ENST00000394633 KLF15Q9UIH9 416 aa16.92■□□□□ 0.3
PCDHA1-202ENST00000394633 DAPP1Q9UN19 280 aa16.92■□□□□ 0.3
PCDHA1-202ENST00000394633 MRPS7Q9Y2R9 242 aaKnown RBP16.92■□□□□ 0.3
PCDHA1-202ENST00000394633 TRAV1-2A0A0B4J238 106 aa16.92■□□□□ 0.3
PCDHA1-202ENST00000394633 MAGEB4O15481 346 aaPredicted RBP16.92■□□□□ 0.3
PCDHA1-202ENST00000394633 FMO6PO60774 539 aa16.92■□□□□ 0.3
PCDHA1-202ENST00000394633 KCNJ13O60928 360 aa16.92■□□□□ 0.3
PCDHA1-202ENST00000394633 RAF1P04049 648 aa16.92■□□□□ 0.3
PCDHA1-202ENST00000394633 ANKRD34CP0C6C1 535 aa16.92■□□□□ 0.3
PCDHA1-202ENST00000394633 ZNF3P17036 446 aa16.92■□□□□ 0.3
PCDHA1-202ENST00000394633 ST3GAL2Q16842 350 aa16.92■□□□□ 0.3
PCDHA1-202ENST00000394633 GSG1Q2KHT4 349 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms