RNA–Protein interactions for RNA: ENST00000394597.6

RFFL-202, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFFL, Length 4,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-202ENST00000394597 LDAHQ9H6V9 325 aa5.31□□□□□ -1.56
RFFL-202ENST00000394597 RPS10P5Q9NQ39 176 aa5.31□□□□□ -1.56
RFFL-202ENST00000394597 PNO1Q9NRX1 252 aaKnown RBP5.31□□□□□ -1.56
RFFL-202ENST00000394597 CLEC1BQ9P126 229 aa5.31□□□□□ -1.56
RFFL-202ENST00000394597 MED16Q9Y2X0 877 aa5.31□□□□□ -1.56
RFFL-202ENST00000394597 AP1M2Q9Y6Q5 423 aa5.31□□□□□ -1.56
RFFL-202ENST00000394597 PDCD11Q14690 1871 aaKnown RBP5.31□□□□□ -1.56
RFFL-202ENST00000394597 FAM221BA6H8Z2 402 aa5.31□□□□□ -1.56
RFFL-202ENST00000394597 H0Y8X5 98 aa5.31□□□□□ -1.56
RFFL-202ENST00000394597 M0R082 166 aa5.31□□□□□ -1.56
RFFL-202ENST00000394597 BCAT2O15382 392 aaPredicted RBP5.31□□□□□ -1.56
RFFL-202ENST00000394597 PTP4A3O75365 173 aa5.31□□□□□ -1.56
RFFL-202ENST00000394597 HIST1H2ABP04908 130 aa5.31□□□□□ -1.56
RFFL-202ENST00000394597 SCG5P05408 212 aa5.31□□□□□ -1.56
RFFL-202ENST00000394597 OR12D1P0DN82 309 aa5.31□□□□□ -1.56
RFFL-202ENST00000394597 HK1P19367 917 aa5.31□□□□□ -1.56
RFFL-202ENST00000394597 PSMA3P25788 255 aa5.31□□□□□ -1.56
RFFL-202ENST00000394597 CERS1P27544 350 aa5.31□□□□□ -1.56
RFFL-202ENST00000394597 EPHA2P29317 976 aa5.31□□□□□ -1.56
RFFL-202ENST00000394597 AGTR1P30556 359 aa5.31□□□□□ -1.56
RFFL-202ENST00000394597 DRD3P35462 400 aa5.31□□□□□ -1.56
RFFL-202ENST00000394597 SLC19A1P41440 591 aa5.31□□□□□ -1.56
RFFL-202ENST00000394597 RFX2P48378 723 aa5.31□□□□□ -1.56
RFFL-202ENST00000394597 AKR1C2P52895 323 aa5.31□□□□□ -1.56
RFFL-202ENST00000394597 TAS2R38P59533 333 aa5.31□□□□□ -1.56
RFFL-202ENST00000394597 VLDLRP98155 873 aa5.31□□□□□ -1.56
RFFL-202ENST00000394597 ID2Q02363 134 aa5.31□□□□□ -1.56
RFFL-202ENST00000394597 AKR1C1Q04828 323 aa5.31□□□□□ -1.56
RFFL-202ENST00000394597 GPR176Q14439 515 aa5.31□□□□□ -1.56
RFFL-202ENST00000394597 PUM1Q14671 1186 aaKnown RBP eCLIP5.31□□□□□ -1.56
RFFL-202ENST00000394597 TRAM2Q15035 370 aa5.31□□□□□ -1.56
RFFL-202ENST00000394597 NKAPLQ5M9Q1 402 aa5.31□□□□□ -1.56
RFFL-202ENST00000394597 CCNJQ5T5M9 372 aa5.31□□□□□ -1.56
RFFL-202ENST00000394597 PHF19Q5T6S3 580 aa5.31□□□□□ -1.56
RFFL-202ENST00000394597 LYSMD4Q5XG99 296 aa5.31□□□□□ -1.56
RFFL-202ENST00000394597 KDM4DQ6B0I6 523 aa5.31□□□□□ -1.56
RFFL-202ENST00000394597 GPR139Q6DWJ6 353 aa5.31□□□□□ -1.56
RFFL-202ENST00000394597 EIF5AL1Q6IS14 154 aaKnown RBP5.31□□□□□ -1.56
RFFL-202ENST00000394597 H3F3CQ6NXT2 135 aa5.31□□□□□ -1.56
RFFL-202ENST00000394597 LRFN4Q6PJG9 635 aa5.31□□□□□ -1.56
RFFL-202ENST00000394597 LYPD4Q6UWN0 246 aa5.31□□□□□ -1.56
RFFL-202ENST00000394597 HIST3H2AQ7L7L0 130 aa5.31□□□□□ -1.56
RFFL-202ENST00000394597 ZNF551Q7Z340 670 aaPredicted RBP5.31□□□□□ -1.56
RFFL-202ENST00000394597 TMPRSS9Q7Z410 1059 aa5.31□□□□□ -1.56
RFFL-202ENST00000394597 BEST3Q8N1M1 668 aa5.31□□□□□ -1.56
RFFL-202ENST00000394597 LRRC25Q8N386 305 aaPredicted RBP5.31□□□□□ -1.56
RFFL-202ENST00000394597 ZNF527Q8NB42 609 aa5.31□□□□□ -1.56
RFFL-202ENST00000394597 SYT14Q8NB59 555 aa5.31□□□□□ -1.56
RFFL-202ENST00000394597 MFSD9Q8NBP5 474 aa5.31□□□□□ -1.56
RFFL-202ENST00000394597 OR2L3Q8NG85 312 aa5.31□□□□□ -1.56
RFFL-202ENST00000394597 CCDC107Q8WV48 283 aa5.31□□□□□ -1.56
RFFL-202ENST00000394597 HIST1H2ACQ93077 130 aa5.31□□□□□ -1.56
RFFL-202ENST00000394597 PDXPQ96GD0 296 aa5.31□□□□□ -1.56
RFFL-202ENST00000394597 LRR1Q96L50 414 aa5.31□□□□□ -1.56
RFFL-202ENST00000394597 WDR77Q9BQA1 342 aaPredicted RBP5.31□□□□□ -1.56
RFFL-202ENST00000394597 TMEM43Q9BTV4 400 aa5.31□□□□□ -1.56
RFFL-202ENST00000394597 PINK1Q9BXM7 581 aa5.31□□□□□ -1.56
RFFL-202ENST00000394597 RGCCQ9H4X1 137 aa5.31□□□□□ -1.56
RFFL-202ENST00000394597 EXO5Q9H790 373 aa5.31□□□□□ -1.56
RFFL-202ENST00000394597 PRTFDC1Q9NRG1 225 aa5.31□□□□□ -1.56
RFFL-202ENST00000394597 SLC22A11Q9NSA0 550 aa5.31□□□□□ -1.56
RFFL-202ENST00000394597 ASIC5Q9NY37 505 aa5.31□□□□□ -1.56
RFFL-202ENST00000394597 UPB1Q9UBR1 384 aa5.31□□□□□ -1.56
RFFL-202ENST00000394597 EPHA6Q9UF33 1036 aa5.31□□□□□ -1.56
RFFL-202ENST00000394597 SERGEFQ9UGK8 458 aa5.31□□□□□ -1.56
RFFL-202ENST00000394597 ADAM29Q9UKF5 820 aa5.31□□□□□ -1.56
RFFL-202ENST00000394597 NDRG4Q9ULP0 352 aaKnown RBP5.31□□□□□ -1.56
RFFL-202ENST00000394597 NOP16Q9Y3C1 178 aaKnown RBP5.31□□□□□ -1.56
RFFL-202ENST00000394597 LRIT2A6NDA9 550 aa5.3□□□□□ -1.56
RFFL-202ENST00000394597 C5orf51A6NDU8 294 aa5.3□□□□□ -1.56
RFFL-202ENST00000394597 TUBAL3A6NHL2 446 aa5.3□□□□□ -1.56
RFFL-202ENST00000394597 CH25HO95992 272 aa5.3□□□□□ -1.56
RFFL-202ENST00000394597 ETFAP13804 333 aa5.3□□□□□ -1.56
RFFL-202ENST00000394597 GABRG2P18507 467 aa5.3□□□□□ -1.56
RFFL-202ENST00000394597 ITPKBP27987 946 aa5.3□□□□□ -1.56
RFFL-202ENST00000394597 NR0B1P51843 470 aaKnown RBP5.3□□□□□ -1.56
RFFL-202ENST00000394597 REEP5Q00765 189 aa5.3□□□□□ -1.56
RFFL-202ENST00000394597 TIAL1Q01085 375 aaKnown RBP eCLIP5.3□□□□□ -1.56
RFFL-202ENST00000394597 HYAL2Q12891 473 aa5.3□□□□□ -1.56
RFFL-202ENST00000394597 MLLT11Q13015 90 aaPredicted RBP5.3□□□□□ -1.56
RFFL-202ENST00000394597 BIKQ13323 160 aa5.3□□□□□ -1.56
RFFL-202ENST00000394597 GINS1Q14691 196 aa5.3□□□□□ -1.56
RFFL-202ENST00000394597 ARHGAP40Q5TG30 622 aa5.3□□□□□ -1.56
RFFL-202ENST00000394597 FAM180AQ6UWF9 173 aa5.3□□□□□ -1.56
RFFL-202ENST00000394597 SYT13Q7L8C5 426 aa5.3□□□□□ -1.56
RFFL-202ENST00000394597 PROKR2Q8NFJ6 384 aa5.3□□□□□ -1.56
RFFL-202ENST00000394597 OR4Q3Q8NH05 313 aa5.3□□□□□ -1.56
RFFL-202ENST00000394597 CD300LFQ8TDQ1 290 aa5.3□□□□□ -1.56
RFFL-202ENST00000394597 CHTF18Q8WVB6 975 aa5.3□□□□□ -1.56
RFFL-202ENST00000394597 ZFPM2Q8WW38 1151 aa5.3□□□□□ -1.56
RFFL-202ENST00000394597 ADAMTS14Q8WXS8 1223 aa5.3□□□□□ -1.56
RFFL-202ENST00000394597 VWCEQ96DN2 955 aa5.3□□□□□ -1.56
RFFL-202ENST00000394597 SLC6A18Q96N87 628 aa5.3□□□□□ -1.56
RFFL-202ENST00000394597 SGPP1Q9BX95 441 aa5.3□□□□□ -1.56
RFFL-202ENST00000394597 KIR3DX1Q9H7L2 352 aa5.3□□□□□ -1.56
RFFL-202ENST00000394597 TBC1D29Q9UFV1 150 aa5.3□□□□□ -1.56
RFFL-202ENST00000394597 MIOXQ9UGB7 285 aa5.3□□□□□ -1.56
RFFL-202ENST00000394597 SLC17A4Q9Y2C5 497 aa5.3□□□□□ -1.56
RFFL-202ENST00000394597 EXOSC1Q9Y3B2 195 aaKnown RBP5.3□□□□□ -1.56
RFFL-202ENST00000394597 HYKKA2RU49 373 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms