RNA–Protein interactions for RNA: ENST00000394081.7

RARA-202, Transcript of retinoic acid receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene RARA, Length 2,285 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-202ENST00000394081 ACTA2P62736 377 aa21.07■□□□□ 0.96
RARA-202ENST00000394081 ACTG2P63267 376 aa21.07■□□□□ 0.96
RARA-202ENST00000394081 ILF3Q12906 894 aaKnown RBP eCLIP21.07■□□□□ 0.96
RARA-202ENST00000394081 CDK5R1Q15078 307 aa21.07■□□□□ 0.96
RARA-202ENST00000394081 SFRP5Q5T4F7 317 aa21.07■□□□□ 0.96
RARA-202ENST00000394081 UNQ9370/PRO34162Q6UXP9 181 aa21.07■□□□□ 0.96
RARA-202ENST00000394081 RPTNQ6XPR3 784 aa21.07■□□□□ 0.96
RARA-202ENST00000394081 STPG2Q8N412 459 aa21.07■□□□□ 0.96
RARA-202ENST00000394081 HDDC3Q8N4P3 179 aa21.07■□□□□ 0.96
RARA-202ENST00000394081 NUP43Q8NFH3 380 aa21.07■□□□□ 0.96
RARA-202ENST00000394081 SLC25A32Q9H2D1 315 aa21.07■□□□□ 0.96
RARA-202ENST00000394081 OPN4Q9UHM6 478 aa21.07■□□□□ 0.96
RARA-202ENST00000394081 ZNF443Q9Y2A4 671 aaPredicted RBP21.07■□□□□ 0.96
RARA-202ENST00000394081 DUXAA6NLW8 204 aa21.07■□□□□ 0.96
RARA-202ENST00000394081 RIIAD1A6NNX1 92 aa21.07■□□□□ 0.96
RARA-202ENST00000394081 H7BY64 318 aa21.07■□□□□ 0.96
RARA-202ENST00000394081 OR1F1O43749 312 aa21.07■□□□□ 0.96
RARA-202ENST00000394081 VEGFDO43915 354 aa21.07■□□□□ 0.96
RARA-202ENST00000394081 AGR2O95994 175 aa21.07■□□□□ 0.96
RARA-202ENST00000394081 CSNK2A2P19784 350 aaPredicted RBP21.07■□□□□ 0.96
RARA-202ENST00000394081 MAZP56270 477 aaKnown RBP21.07■□□□□ 0.96
RARA-202ENST00000394081 EIPR1Q53HC9 387 aa21.07■□□□□ 0.96
RARA-202ENST00000394081 C9orf64Q5T6V5 341 aa21.07■□□□□ 0.96
RARA-202ENST00000394081 CNRIP1Q96F85 164 aaPredicted RBP21.07■□□□□ 0.96
RARA-202ENST00000394081 SIPA1Q96FS4 1042 aa21.07■□□□□ 0.96
RARA-202ENST00000394081 PRAP1Q96NZ9 151 aa21.07■□□□□ 0.96
RARA-202ENST00000394081 ACTRT3Q9BYD9 372 aa21.07■□□□□ 0.96
RARA-202ENST00000394081 MTHFD2LQ9H903 347 aaPredicted RBP21.07■□□□□ 0.96
RARA-202ENST00000394081 TRAPPC13A5PLN9 417 aa21.06■□□□□ 0.96
RARA-202ENST00000394081 LRIT2A6NDA9 550 aa21.06■□□□□ 0.96
RARA-202ENST00000394081 H3BUI4 141 aa21.06■□□□□ 0.96
RARA-202ENST00000394081 DNASE2O00115 360 aaPredicted RBP21.06■□□□□ 0.96
RARA-202ENST00000394081 LGALS8O00214 317 aa21.06■□□□□ 0.96
RARA-202ENST00000394081 KHDRBS3O75525 346 aaKnown RBP21.06■□□□□ 0.96
RARA-202ENST00000394081 ERAL1O75616 437 aaKnown RBP21.06■□□□□ 0.96
RARA-202ENST00000394081 RAB40ALP0C0E4 278 aa21.06■□□□□ 0.96
RARA-202ENST00000394081 GDI2P50395 445 aaKnown RBP21.06■□□□□ 0.96
RARA-202ENST00000394081 ZNF793Q6ZN11 406 aa21.06■□□□□ 0.96
RARA-202ENST00000394081 TMCO2Q7Z6W1 182 aaPredicted RBP21.06■□□□□ 0.96
RARA-202ENST00000394081 OR13C5Q8NGS8 318 aa21.06■□□□□ 0.96
RARA-202ENST00000394081 RAB40AQ8WXH6 277 aa21.06■□□□□ 0.96
RARA-202ENST00000394081 ORAI1Q96D31 301 aa21.06■□□□□ 0.96
RARA-202ENST00000394081 PRSS27Q9BQR3 290 aa21.06■□□□□ 0.96
RARA-202ENST00000394081 ORAI3Q9BRQ5 295 aa21.06■□□□□ 0.96
RARA-202ENST00000394081 DPH1Q9BZG8 443 aa21.06■□□□□ 0.96
RARA-202ENST00000394081 HPP00738 406 aa21.06■□□□□ 0.96
RARA-202ENST00000394081 ADRB1P08588 477 aa21.06■□□□□ 0.96
RARA-202ENST00000394081 CLTBP09497 229 aa21.06■□□□□ 0.96
RARA-202ENST00000394081 MPIP34949 423 aa21.06■□□□□ 0.96
RARA-202ENST00000394081 GMFBP60983 142 aa21.06■□□□□ 0.96
RARA-202ENST00000394081 CEBPEQ15744 281 aa21.06■□□□□ 0.96
RARA-202ENST00000394081 CLVS2Q5SYC1 327 aa21.06■□□□□ 0.96
RARA-202ENST00000394081 MRM1Q6IN84 353 aaKnown RBP21.06■□□□□ 0.96
RARA-202ENST00000394081 MTFR2Q6P444 385 aa21.06■□□□□ 0.96
RARA-202ENST00000394081 RANBP3LQ86VV4 465 aaPredicted RBP21.06■□□□□ 0.96
RARA-202ENST00000394081 CCDC116Q8IYX3 515 aa21.06■□□□□ 0.96
RARA-202ENST00000394081 OR5K2Q8NHB8 316 aa21.06■□□□□ 0.96
RARA-202ENST00000394081 NSMAFQ92636 917 aa21.06■□□□□ 0.96
RARA-202ENST00000394081 TFGQ92734 400 aaPredicted RBP21.06■□□□□ 0.96
RARA-202ENST00000394081 NPAS1Q99742 590 aa21.06■□□□□ 0.96
RARA-202ENST00000394081 ARL6Q9H0F7 186 aa21.06■□□□□ 0.96
RARA-202ENST00000394081 COPS3Q9UNS2 423 aa21.06■□□□□ 0.96
RARA-202ENST00000394081 UBE2QL1A1L167 161 aa21.05■□□□□ 0.96
RARA-202ENST00000394081 MPPED2Q15777 294 aa21.05■□□□□ 0.96
RARA-202ENST00000394081 PUS10Q3MIT2 529 aaKnown RBP21.05■□□□□ 0.96
RARA-202ENST00000394081 RPL22L1Q6P5R6 122 aaKnown RBP21.05■□□□□ 0.96
RARA-202ENST00000394081 IZUMO1Q8IYV9 350 aa21.05■□□□□ 0.96
RARA-202ENST00000394081 OR6K3Q8NGY3 331 aa21.05■□□□□ 0.96
RARA-202ENST00000394081 MRPS24Q96EL2 167 aaKnown RBP21.05■□□□□ 0.96
RARA-202ENST00000394081 SLC38A3Q99624 504 aa21.05■□□□□ 0.96
RARA-202ENST00000394081 OR51V1Q9H2C8 321 aa21.05■□□□□ 0.96
RARA-202ENST00000394081 MRPL15Q9P015 296 aaKnown RBP21.05■□□□□ 0.96
RARA-202ENST00000394081 NTMQ9P121 344 aa21.05■□□□□ 0.96
RARA-202ENST00000394081 ACOT7O00154 380 aa21.04■□□□□ 0.96
RARA-202ENST00000394081 GPRIN2O60269 458 aa21.04■□□□□ 0.96
RARA-202ENST00000394081 ZIC2O95409 532 aaPredicted RBP21.04■□□□□ 0.96
RARA-202ENST00000394081 IL9P15248 144 aa21.04■□□□□ 0.96
RARA-202ENST00000394081 ZNF3P17036 446 aa21.04■□□□□ 0.96
RARA-202ENST00000394081 RPS11P62280 158 aaKnown RBP eCLIP21.04■□□□□ 0.96
RARA-202ENST00000394081 LINC00303Q3SY05 128 aa21.04■□□□□ 0.96
RARA-202ENST00000394081 FRRS1Q6ZNA5 592 aa21.04■□□□□ 0.96
RARA-202ENST00000394081 TMPRSS11FQ6ZWK6 438 aa21.04■□□□□ 0.96
RARA-202ENST00000394081 C11orf96Q7Z7L8 435 aa21.04■□□□□ 0.96
RARA-202ENST00000394081 TMEM25Q86YD3 366 aa21.04■□□□□ 0.96
RARA-202ENST00000394081 SLC43A2Q8N370 569 aa21.04■□□□□ 0.96
RARA-202ENST00000394081 DNAAF1Q8NEP3 725 aa21.04■□□□□ 0.96
RARA-202ENST00000394081 TAS2R10Q9NYW0 307 aa21.04■□□□□ 0.96
RARA-202ENST00000394081 CYB5R1Q9UHQ9 305 aa21.04■□□□□ 0.96
RARA-202ENST00000394081 FBXL2Q9UKC9 423 aa21.04■□□□□ 0.96
RARA-202ENST00000394081 AK6Q9Y3D8 172 aaKnown RBP21.04■□□□□ 0.96
RARA-202ENST00000394081 ARPC5O15511 151 aa21.04■□□□□ 0.96
RARA-202ENST00000394081 MRPL3P09001 348 aaKnown RBP21.04■□□□□ 0.96
RARA-202ENST00000394081 DPP4P27487 766 aa21.04■□□□□ 0.96
RARA-202ENST00000394081 GPR1P46091 355 aa21.04■□□□□ 0.96
RARA-202ENST00000394081 ZNF136P52737 540 aa21.04■□□□□ 0.96
RARA-202ENST00000394081 SLC16A1P53985 500 aa21.04■□□□□ 0.96
RARA-202ENST00000394081 CSNK1G2P78368 415 aa21.04■□□□□ 0.96
RARA-202ENST00000394081 PIGKQ92643 395 aa21.04■□□□□ 0.96
RARA-202ENST00000394081 SLC25A38Q96DW6 304 aa21.04■□□□□ 0.96
RARA-202ENST00000394081 MRGPRX3Q96LB0 322 aa21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms