RNA–Protein interactions for RNA: ENST00000393408.7

CBX1-202, Transcript of chromobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX1, Length 2,422 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-202ENST00000393408 CD3GP09693 182 aa17.39■□□□□ 0.37
CBX1-202ENST00000393408 TBC1D3HP0C7X1 549 aa17.39■□□□□ 0.37
CBX1-202ENST00000393408 ATF1P18846 271 aa17.39■□□□□ 0.37
CBX1-202ENST00000393408 ZNF10P21506 573 aaPredicted RBP17.39■□□□□ 0.37
CBX1-202ENST00000393408 DRD5P21918 477 aa17.39■□□□□ 0.37
CBX1-202ENST00000393408 GABRA3P34903 492 aa17.39■□□□□ 0.37
CBX1-202ENST00000393408 OR3A3P47888 321 aa17.39■□□□□ 0.37
CBX1-202ENST00000393408 MMP15P51511 669 aa17.39■□□□□ 0.37
CBX1-202ENST00000393408 POU6F2P78424 691 aaPredicted RBP17.39■□□□□ 0.37
CBX1-202ENST00000393408 MGAT2Q10469 447 aa17.39■□□□□ 0.37
CBX1-202ENST00000393408 POU4F2Q12837 409 aa17.39■□□□□ 0.37
CBX1-202ENST00000393408 PRRT3Q5FWE3 981 aa17.39■□□□□ 0.37
CBX1-202ENST00000393408 TBC1D3CQ6IPX1 549 aa17.39■□□□□ 0.37
CBX1-202ENST00000393408 FIGLAQ6QHK4 219 aa17.39■□□□□ 0.37
CBX1-202ENST00000393408 ZNF782Q6ZMW2 699 aaPredicted RBP17.39■□□□□ 0.37
CBX1-202ENST00000393408 NUDT18Q6ZVK8 323 aa17.39■□□□□ 0.37
CBX1-202ENST00000393408 PRSS41Q7RTY9 318 aa17.39■□□□□ 0.37
CBX1-202ENST00000393408 TBC1D3Q8IZP1 549 aaPredicted RBP17.39■□□□□ 0.37
CBX1-202ENST00000393408 TOMM5Q8N4H5 51 aa17.39■□□□□ 0.37
CBX1-202ENST00000393408 CAMKVQ8NCB2 501 aa17.39■□□□□ 0.37
CBX1-202ENST00000393408 CCL4L1Q8NHW4 92 aa17.39■□□□□ 0.37
CBX1-202ENST00000393408 CNOT9Q92600 299 aaKnown RBP17.39■□□□□ 0.37
CBX1-202ENST00000393408 PMM1Q92871 262 aa17.39■□□□□ 0.37
CBX1-202ENST00000393408 MCCC2Q9HCC0 563 aa17.39■□□□□ 0.37
CBX1-202ENST00000393408 ZFP64Q9NPA5 681 aa17.39■□□□□ 0.37
CBX1-202ENST00000393408 STMN3Q9NZ72 180 aa17.39■□□□□ 0.37
CBX1-202ENST00000393408 ING4Q9UNL4 249 aa17.39■□□□□ 0.37
CBX1-202ENST00000393408 SNRPBP14678 240 aaKnown RBP17.38■□□□□ 0.37
CBX1-202ENST00000393408 PPP2CBP62714 309 aa17.38■□□□□ 0.37
CBX1-202ENST00000393408 PPP2CAP67775 309 aa17.38■□□□□ 0.37
CBX1-202ENST00000393408 DGCR2P98153 550 aa17.38■□□□□ 0.37
CBX1-202ENST00000393408 RTL4Q6ZR62 310 aa17.38■□□□□ 0.37
CBX1-202ENST00000393408 SIAH3Q8IW03 269 aa17.38■□□□□ 0.37
CBX1-202ENST00000393408 OR4D9Q8NGE8 314 aa17.38■□□□□ 0.37
CBX1-202ENST00000393408 GPR137Q96N19 417 aa17.38■□□□□ 0.37
CBX1-202ENST00000393408 OR51J1Q9H342 316 aa17.38■□□□□ 0.37
CBX1-202ENST00000393408 ZCCHC4Q9H5U6 513 aa17.38■□□□□ 0.37
CBX1-202ENST00000393408 SFXN1Q9H9B4 322 aa17.38■□□□□ 0.37
CBX1-202ENST00000393408 CLEC4AQ9UMR7 237 aa17.38■□□□□ 0.37
CBX1-202ENST00000393408 A0A0B4J203 849 aa17.38■□□□□ 0.37
CBX1-202ENST00000393408 TEX13CA0A0J9YWL9 993 aa17.38■□□□□ 0.37
CBX1-202ENST00000393408 A0A1B0GWA3 101 aa17.38■□□□□ 0.37
CBX1-202ENST00000393408 OGG1O15527 345 aa17.38■□□□□ 0.37
CBX1-202ENST00000393408 GPR75O95800 540 aa17.38■□□□□ 0.37
CBX1-202ENST00000393408 SERPINA3P01011 423 aa17.38■□□□□ 0.37
CBX1-202ENST00000393408 CT62P0C5K7 136 aa17.38■□□□□ 0.37
CBX1-202ENST00000393408 EPXP11678 715 aa17.38■□□□□ 0.37
CBX1-202ENST00000393408 SLC6A6P31641 620 aa17.38■□□□□ 0.37
CBX1-202ENST00000393408 TP53I3Q53FA7 332 aa17.38■□□□□ 0.37
CBX1-202ENST00000393408 CEP78Q5JTW2 689 aa17.38■□□□□ 0.37
CBX1-202ENST00000393408 CD276Q5ZPR3 534 aa17.38■□□□□ 0.37
CBX1-202ENST00000393408 ARHGAP11AQ6P4F7 1023 aa17.38■□□□□ 0.37
CBX1-202ENST00000393408 ENPP7Q6UWV6 458 aa17.38■□□□□ 0.37
CBX1-202ENST00000393408 YAF2Q8IY57 180 aa17.38■□□□□ 0.37
CBX1-202ENST00000393408 ZNF655Q8N720 491 aaPredicted RBP17.38■□□□□ 0.37
CBX1-202ENST00000393408 ANGPTL6Q8NI99 470 aa17.38■□□□□ 0.37
CBX1-202ENST00000393408 OR2M2Q96R28 347 aa17.38■□□□□ 0.37
CBX1-202ENST00000393408 ZNF426Q9BUY5 554 aa17.38■□□□□ 0.37
CBX1-202ENST00000393408 TTTY10Q9BZA0 68 aa17.38■□□□□ 0.37
CBX1-202ENST00000393408 ABRACLQ9P1F3 81 aa17.38■□□□□ 0.37
CBX1-202ENST00000393408 PCOLCE2Q9UKZ9 415 aa17.38■□□□□ 0.37
CBX1-202ENST00000393408 CYR61O00622 381 aa17.37■□□□□ 0.37
CBX1-202ENST00000393408 IFNGP01579 166 aa17.37■□□□□ 0.37
CBX1-202ENST00000393408 TFP02787 698 aa17.37■□□□□ 0.37
CBX1-202ENST00000393408 NGFRP08138 427 aa17.37■□□□□ 0.37
CBX1-202ENST00000393408 GIFP27352 417 aa17.37■□□□□ 0.37
CBX1-202ENST00000393408 HCCSP53701 268 aa17.37■□□□□ 0.37
CBX1-202ENST00000393408 KIAA1024LP59773 190 aa17.37■□□□□ 0.37
CBX1-202ENST00000393408 RNASE12Q5GAN4 147 aaKnown RBP17.37■□□□□ 0.37
CBX1-202ENST00000393408 RD3Q7Z3Z2 195 aa17.37■□□□□ 0.37
CBX1-202ENST00000393408 SYT9Q86SS6 491 aa17.37■□□□□ 0.37
CBX1-202ENST00000393408 FAM109AQ8N4B1 249 aa17.37■□□□□ 0.37
CBX1-202ENST00000393408 PHOSPHO2Q8TCD6 241 aa17.37■□□□□ 0.37
CBX1-202ENST00000393408 THAP4Q8WY91 577 aa17.37■□□□□ 0.37
CBX1-202ENST00000393408 POLE3Q9NRF9 147 aa17.37■□□□□ 0.37
CBX1-202ENST00000393408 TEKT2Q9UIF3 430 aa17.37■□□□□ 0.37
CBX1-202ENST00000393408 ZNF222Q9UK12 451 aa17.37■□□□□ 0.37
CBX1-202ENST00000393408 POLR2CP19387 275 aaPredicted RBP17.37■□□□□ 0.37
CBX1-202ENST00000393408 KIR2DL1P43626 348 aaPredicted RBP17.37■□□□□ 0.37
CBX1-202ENST00000393408 PITPNAQ00169 270 aa17.37■□□□□ 0.37
CBX1-202ENST00000393408 ARL14Q8N4G2 192 aa17.37■□□□□ 0.37
CBX1-202ENST00000393408 OR5T3Q8NGG3 340 aa17.37■□□□□ 0.37
CBX1-202ENST00000393408 ZNF431Q8TF32 576 aaPredicted RBP17.37■□□□□ 0.37
CBX1-202ENST00000393408 SMIM19Q96E16 107 aa17.37■□□□□ 0.37
CBX1-202ENST00000393408 PELI1Q96FA3 418 aa17.37■□□□□ 0.37
CBX1-202ENST00000393408 PTCHD1Q96NR3 888 aa17.37■□□□□ 0.37
CBX1-202ENST00000393408 RANBP3Q9H6Z4 567 aaPredicted RBP17.37■□□□□ 0.37
CBX1-202ENST00000393408 SERTAD3Q9UJW9 196 aa17.37■□□□□ 0.37
CBX1-202ENST00000393408 MGAT4AQ9UM21 535 aa17.37■□□□□ 0.37
CBX1-202ENST00000393408 A0A1W2PPK0 400 aa17.36■□□□□ 0.37
CBX1-202ENST00000393408 H0YGG7 62 aa17.36■□□□□ 0.37
CBX1-202ENST00000393408 MAGEB4O15481 346 aaPredicted RBP17.36■□□□□ 0.37
CBX1-202ENST00000393408 ADAM11O75078 769 aa17.36■□□□□ 0.37
CBX1-202ENST00000393408 ANXA3P12429 323 aa17.36■□□□□ 0.37
CBX1-202ENST00000393408 GDI2P50395 445 aaKnown RBP17.36■□□□□ 0.37
CBX1-202ENST00000393408 ARF3P61204 181 aaPredicted RBP17.36■□□□□ 0.37
CBX1-202ENST00000393408 CDK5R1Q15078 307 aa17.36■□□□□ 0.37
CBX1-202ENST00000393408 ZMYND19Q96E35 227 aaPredicted RBP17.36■□□□□ 0.37
CBX1-202ENST00000393408 ZFP3Q96NJ6 502 aa17.36■□□□□ 0.37
CBX1-202ENST00000393408 CACNG6Q9BXT2 260 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms