RNA–Protein interactions for RNA: ENST00000392003.6

COL6A3-204, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 2 BASIC

Gene COL6A3, Length 3,464 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-204ENST00000392003 OR6C4Q8NGE1 309 aa8.93□□□□□ -0.98
COL6A3-204ENST00000392003 FLVCR1-AS1Q8TAF5 88 aa8.93□□□□□ -0.98
COL6A3-204ENST00000392003 PATE1Q8WXA2 126 aa8.93□□□□□ -0.98
COL6A3-204ENST00000392003 ASB15Q8WXK1 588 aa8.93□□□□□ -0.98
COL6A3-204ENST00000392003 RSC1A1Q92681 617 aa8.93□□□□□ -0.98
COL6A3-204ENST00000392003 POM121Q96HA1 1249 aa8.93□□□□□ -0.98
COL6A3-204ENST00000392003 HS6ST2Q96MM7 605 aa8.93□□□□□ -0.98
COL6A3-204ENST00000392003 MED18Q9BUE0 208 aa8.93□□□□□ -0.98
COL6A3-204ENST00000392003 PHF7Q9BWX1 381 aaPredicted RBP8.93□□□□□ -0.98
COL6A3-204ENST00000392003 GON7Q9BXV9 100 aa8.93□□□□□ -0.98
COL6A3-204ENST00000392003 OR52D1Q9H346 318 aa8.93□□□□□ -0.98
COL6A3-204ENST00000392003 PILRAQ9UKJ1 303 aa8.93□□□□□ -0.98
COL6A3-204ENST00000392003 MRPS17Q9Y2R5 130 aaKnown RBP8.93□□□□□ -0.98
COL6A3-204ENST00000392003 YARS2Q9Y2Z4 477 aaKnown RBP8.93□□□□□ -0.98
COL6A3-204ENST00000392003 KIR2DS5A0A0G2JLQ3 304 aa8.93□□□□□ -0.98
COL6A3-204ENST00000392003 A0A0G2JNG1 304 aa8.93□□□□□ -0.98
COL6A3-204ENST00000392003 KIR2DS3K7RE56 304 aa8.93□□□□□ -0.98
COL6A3-204ENST00000392003 PLOD3O60568 738 aa8.93□□□□□ -0.98
COL6A3-204ENST00000392003 SOX30O94993 753 aa8.93□□□□□ -0.98
COL6A3-204ENST00000392003 IFNA16P05015 189 aa8.93□□□□□ -0.98
COL6A3-204ENST00000392003 HOXD4P09016 255 aaPredicted RBP8.93□□□□□ -0.98
COL6A3-204ENST00000392003 BLKP51451 505 aa8.93□□□□□ -0.98
COL6A3-204ENST00000392003 SLC16A1P53985 500 aa8.93□□□□□ -0.98
COL6A3-204ENST00000392003 OR2B6P58173 313 aa8.93□□□□□ -0.98
COL6A3-204ENST00000392003 EEF1A1P68104 462 aaKnown RBP8.93□□□□□ -0.98
COL6A3-204ENST00000392003 KIR2DS5Q14953 304 aa8.93□□□□□ -0.98
COL6A3-204ENST00000392003 ZNF791Q3KP31 576 aaPredicted RBP8.93□□□□□ -0.98
COL6A3-204ENST00000392003 PYDC2Q56P42 97 aa8.93□□□□□ -0.98
COL6A3-204ENST00000392003 EEF1A1P5Q5VTE0 462 aa8.93□□□□□ -0.98
COL6A3-204ENST00000392003 KIAA0895LQ68EN5 471 aa8.93□□□□□ -0.98
COL6A3-204ENST00000392003 MZT2AQ6P582 158 aa8.93□□□□□ -0.98
COL6A3-204ENST00000392003 XKRXQ6PP77 449 aa8.93□□□□□ -0.98
COL6A3-204ENST00000392003 BEND4Q6ZU67 534 aa8.93□□□□□ -0.98
COL6A3-204ENST00000392003 ZNF527Q8NB42 609 aa8.93□□□□□ -0.98
COL6A3-204ENST00000392003 OR51G2Q8NGK0 314 aa8.93□□□□□ -0.98
COL6A3-204ENST00000392003 TM9SF4Q92544 642 aa8.93□□□□□ -0.98
COL6A3-204ENST00000392003 FGF11Q92914 225 aa8.93□□□□□ -0.98
COL6A3-204ENST00000392003 TMED9Q9BVK6 235 aa8.93□□□□□ -0.98
COL6A3-204ENST00000392003 UBQLN3Q9H347 655 aa8.93□□□□□ -0.98
COL6A3-204ENST00000392003 UBE2ZQ9H832 354 aaPredicted RBP8.93□□□□□ -0.98
COL6A3-204ENST00000392003 EIF3KQ9UBQ5 218 aaKnown RBP8.93□□□□□ -0.98
COL6A3-204ENST00000392003 GRIP1Q9Y3R0 1128 aa8.93□□□□□ -0.98
COL6A3-204ENST00000392003 NPIPA5A0A0B4J1W7 369 aa8.93□□□□□ -0.98
COL6A3-204ENST00000392003 TRDV1A0A1B0GX56 115 aa8.93□□□□□ -0.98
COL6A3-204ENST00000392003 NPIPA7E9PJI5 369 aa8.93□□□□□ -0.98
COL6A3-204ENST00000392003 ATP1B1P05026 303 aa8.93□□□□□ -0.98
COL6A3-204ENST00000392003 NPIPA8P0DM63 369 aa8.93□□□□□ -0.98
COL6A3-204ENST00000392003 BMP8BP34820 402 aa8.93□□□□□ -0.98
COL6A3-204ENST00000392003 SKP1P63208 163 aa8.93□□□□□ -0.98
COL6A3-204ENST00000392003 EXOSC7Q15024 291 aaKnown RBP8.93□□□□□ -0.98
COL6A3-204ENST00000392003 KLHL12Q53G59 568 aa8.93□□□□□ -0.98
COL6A3-204ENST00000392003 SMARCD3Q6STE5 483 aa8.93□□□□□ -0.98
COL6A3-204ENST00000392003 BMP8AQ7Z5Y6 402 aa8.93□□□□□ -0.98
COL6A3-204ENST00000392003 RAB43Q86YS6 212 aa8.93□□□□□ -0.98
COL6A3-204ENST00000392003 FAM160A2Q8N612 972 aaPredicted RBP8.93□□□□□ -0.98
COL6A3-204ENST00000392003 OR52N1Q8NH53 320 aa8.93□□□□□ -0.98
COL6A3-204ENST00000392003 TMEM68Q96MH6 324 aa8.93□□□□□ -0.98
COL6A3-204ENST00000392003 IFT27Q9BW83 186 aa8.93□□□□□ -0.98
COL6A3-204ENST00000392003 MS4A7Q9GZW8 240 aaPredicted RBP8.93□□□□□ -0.98
COL6A3-204ENST00000392003 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.93□□□□□ -0.98
COL6A3-204ENST00000392003 HINT3Q9NQE9 182 aaKnown RBP8.93□□□□□ -0.98
COL6A3-204ENST00000392003 ACOXLQ9NUZ1 547 aa8.93□□□□□ -0.98
COL6A3-204ENST00000392003 SIDT1Q9NXL6 827 aaKnown RBP8.93□□□□□ -0.98
COL6A3-204ENST00000392003 ADAM30Q9UKF2 790 aa8.93□□□□□ -0.98
COL6A3-204ENST00000392003 PCDHGB2Q9Y5G2 931 aa8.93□□□□□ -0.98
COL6A3-204ENST00000392003 UNC80Q8N2C7 3258 aa8.93□□□□□ -0.98
COL6A3-204ENST00000392003 SMIM30A4D0T7 59 aa8.92□□□□□ -0.98
COL6A3-204ENST00000392003 AKR7A2O43488 359 aa8.92□□□□□ -0.98
COL6A3-204ENST00000392003 DNAJB6O75190 326 aa8.92□□□□□ -0.98
COL6A3-204ENST00000392003 ZNF136P52737 540 aa8.92□□□□□ -0.98
COL6A3-204ENST00000392003 GAS1P54826 345 aa8.92□□□□□ -0.98
COL6A3-204ENST00000392003 S100A12P80511 92 aa8.92□□□□□ -0.98
COL6A3-204ENST00000392003 TAB1Q15750 504 aa8.92□□□□□ -0.98
COL6A3-204ENST00000392003 ZNF544Q6NX49 715 aa8.92□□□□□ -0.98
COL6A3-204ENST00000392003 PLBD1Q6P4A8 553 aa8.92□□□□□ -0.98
COL6A3-204ENST00000392003 ACBD7Q8N6N7 88 aa8.92□□□□□ -0.98
COL6A3-204ENST00000392003 GDPD1Q8N9F7 314 aa8.92□□□□□ -0.98
COL6A3-204ENST00000392003 ATP6V1C2Q8NEY4 427 aa8.92□□□□□ -0.98
COL6A3-204ENST00000392003 OR5T3Q8NGG3 340 aa8.92□□□□□ -0.98
COL6A3-204ENST00000392003 SPRYD4Q8WW59 207 aaPredicted RBP8.92□□□□□ -0.98
COL6A3-204ENST00000392003 ZNF559Q9BR84 538 aa8.92□□□□□ -0.98
COL6A3-204ENST00000392003 ZCCHC4Q9H5U6 513 aa8.92□□□□□ -0.98
COL6A3-204ENST00000392003 SLA2Q9H6Q3 261 aa8.92□□□□□ -0.98
COL6A3-204ENST00000392003 SYNDIG1Q9H7V2 258 aa8.92□□□□□ -0.98
COL6A3-204ENST00000392003 EVA1AQ9H8M9 152 aa8.92□□□□□ -0.98
COL6A3-204ENST00000392003 MRPS2Q9Y399 296 aaKnown RBP8.92□□□□□ -0.98
COL6A3-204ENST00000392003 TICRRQ7Z2Z1 1910 aa8.92□□□□□ -0.98
COL6A3-204ENST00000392003 DAPL1A0PJW8 107 aa8.92□□□□□ -0.98
COL6A3-204ENST00000392003 PMS2P1A4D2B8 440 aa8.92□□□□□ -0.98
COL6A3-204ENST00000392003 SLC35F4A4IF30 521 aa8.92□□□□□ -0.98
COL6A3-204ENST00000392003 RIIAD1A6NNX1 92 aa8.92□□□□□ -0.98
COL6A3-204ENST00000392003 PRR23D1E9PI22 279 aaPredicted RBP8.92□□□□□ -0.98
COL6A3-204ENST00000392003 SOCS6O14544 535 aa8.92□□□□□ -0.98
COL6A3-204ENST00000392003 MBTPS2O43462 519 aa8.92□□□□□ -0.98
COL6A3-204ENST00000392003 GALR3O60755 368 aaPredicted RBP8.92□□□□□ -0.98
COL6A3-204ENST00000392003 PRR23D2P0DMB1 279 aaPredicted RBP8.92□□□□□ -0.98
COL6A3-204ENST00000392003 IL7P13232 177 aa8.92□□□□□ -0.98
COL6A3-204ENST00000392003 FGF9P31371 208 aaPredicted RBP8.92□□□□□ -0.98
COL6A3-204ENST00000392003 TGM4P49221 684 aa8.92□□□□□ -0.98
COL6A3-204ENST00000392003 PPP3R1P63098 170 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms