RNA–Protein interactions for RNA: ENST00000391970.3

PTPRC-205, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 408 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-205ENST00000391970 ADCY5O95622 1261 aa2.32□□□□□ -2.04
PTPRC-205ENST00000391970 PGK1P00558 417 aa2.32□□□□□ -2.04
PTPRC-205ENST00000391970 UGT2B4P06133 528 aa2.32□□□□□ -2.04
PTPRC-205ENST00000391970 S100A6P06703 90 aa2.32□□□□□ -2.04
PTPRC-205ENST00000391970 PRG2P13727 222 aa2.32□□□□□ -2.04
PTPRC-205ENST00000391970 POLR2EP19388 210 aaKnown RBP2.32□□□□□ -2.04
PTPRC-205ENST00000391970 UQCRC2P22695 453 aa2.32□□□□□ -2.04
PTPRC-205ENST00000391970 CHI3L1P36222 383 aaPredicted RBP2.32□□□□□ -2.04
PTPRC-205ENST00000391970 HPCAL1P37235 193 aa2.32□□□□□ -2.04
PTPRC-205ENST00000391970 STARP49675 285 aa2.32□□□□□ -2.04
PTPRC-205ENST00000391970 MEOX2P50222 304 aa2.32□□□□□ -2.04
PTPRC-205ENST00000391970 PPT1P50897 306 aa2.32□□□□□ -2.04
PTPRC-205ENST00000391970 KRTAP10-12P60413 245 aa2.32□□□□□ -2.04
PTPRC-205ENST00000391970 RPL32P62910 135 aaKnown RBP2.32□□□□□ -2.04
PTPRC-205ENST00000391970 LRRC74AQ0VAA2 488 aa2.32□□□□□ -2.04
PTPRC-205ENST00000391970 RAB40BQ12829 278 aa2.32□□□□□ -2.04
PTPRC-205ENST00000391970 ANKDD1AQ495B1 522 aa2.32□□□□□ -2.04
PTPRC-205ENST00000391970 ATAD3BQ5T9A4 648 aa2.32□□□□□ -2.04
PTPRC-205ENST00000391970 TTC23Q5W5X9 447 aa2.32□□□□□ -2.04
PTPRC-205ENST00000391970 THOC7Q6I9Y2 204 aaKnown RBP2.32□□□□□ -2.04
PTPRC-205ENST00000391970 PPP1R42Q7Z4L9 355 aa2.32□□□□□ -2.04
PTPRC-205ENST00000391970 TMEM110Q86TL2 294 aa2.32□□□□□ -2.04
PTPRC-205ENST00000391970 VASH2Q86V25 355 aa2.32□□□□□ -2.04
PTPRC-205ENST00000391970 SPATA24Q86W54 205 aa2.32□□□□□ -2.04
PTPRC-205ENST00000391970 CD177Q8N6Q3 437 aa2.32□□□□□ -2.04
PTPRC-205ENST00000391970 LINC00612Q8N6U2 182 aa2.32□□□□□ -2.04
PTPRC-205ENST00000391970 ZNF525Q8N782 197 aa2.32□□□□□ -2.04
PTPRC-205ENST00000391970 SPERTQ8NA61 448 aa2.32□□□□□ -2.04
PTPRC-205ENST00000391970 OR13F1Q8NGS4 319 aa2.32□□□□□ -2.04
PTPRC-205ENST00000391970 OR2T3Q8NH03 318 aa2.32□□□□□ -2.04
PTPRC-205ENST00000391970 AENQ8WTP8 325 aaKnown RBP2.32□□□□□ -2.04
PTPRC-205ENST00000391970 RLN3Q8WXF3 142 aa2.32□□□□□ -2.04
PTPRC-205ENST00000391970 RPL3LQ92901 407 aaKnown RBP2.32□□□□□ -2.04
PTPRC-205ENST00000391970 SENP8Q96LD8 212 aa2.32□□□□□ -2.04
PTPRC-205ENST00000391970 C12orf66Q96MD2 445 aa2.32□□□□□ -2.04
PTPRC-205ENST00000391970 TTC25Q96NG3 672 aa2.32□□□□□ -2.04
PTPRC-205ENST00000391970 OR5B2Q96R09 309 aa2.32□□□□□ -2.04
PTPRC-205ENST00000391970 ZNF607Q96SK3 696 aa2.32□□□□□ -2.04
PTPRC-205ENST00000391970 RIT2Q99578 217 aa2.32□□□□□ -2.04
PTPRC-205ENST00000391970 CITED1Q99966 193 aa2.32□□□□□ -2.04
PTPRC-205ENST00000391970 OMDQ99983 421 aa2.32□□□□□ -2.04
PTPRC-205ENST00000391970 ZSCAN5AQ9BUG6 496 aa2.32□□□□□ -2.04
PTPRC-205ENST00000391970 C19orf24Q9BVV8 132 aa2.32□□□□□ -2.04
PTPRC-205ENST00000391970 DEFB126Q9BYW3 111 aa2.32□□□□□ -2.04
PTPRC-205ENST00000391970 CAB39LQ9H9S4 337 aa2.32□□□□□ -2.04
PTPRC-205ENST00000391970 C12orf10Q9HB07 376 aa2.32□□□□□ -2.04
PTPRC-205ENST00000391970 PARVGQ9HBI0 331 aa2.32□□□□□ -2.04
PTPRC-205ENST00000391970 RIMS3Q9UJD0 308 aa2.32□□□□□ -2.04
PTPRC-205ENST00000391970 CFAP45Q9UL16 551 aa2.32□□□□□ -2.04
PTPRC-205ENST00000391970 MRPS33Q9Y291 106 aaKnown RBP2.32□□□□□ -2.04
PTPRC-205ENST00000391970 MRPS7Q9Y2R9 242 aaKnown RBP2.32□□□□□ -2.04
PTPRC-205ENST00000391970 WDR45Q9Y484 360 aa2.32□□□□□ -2.04
PTPRC-205ENST00000391970 ASB3Q9Y575 518 aa2.32□□□□□ -2.04
PTPRC-205ENST00000391970 TIMM22Q9Y584 194 aa2.32□□□□□ -2.04
PTPRC-205ENST00000391970 MMP24Q9Y5R2 645 aa2.32□□□□□ -2.04
PTPRC-205ENST00000391970 FHOD3Q2V2M9 1422 aa2.32□□□□□ -2.04
PTPRC-205ENST00000391970 SPATA31E1Q6ZUB1 1445 aa2.32□□□□□ -2.04
PTPRC-205ENST00000391970 SSH2Q76I76 1423 aa2.32□□□□□ -2.04
PTPRC-205ENST00000391970 WDR7Q9Y4E6 1490 aa2.32□□□□□ -2.04
PTPRC-205ENST00000391970 CROCC2H7BZ55 1655 aa2.31□□□□□ -2.04
PTPRC-205ENST00000391970 LOC100131303A0A0U1RQF7 123 aa2.31□□□□□ -2.04
PTPRC-205ENST00000391970 FAM168BA1KXE4 195 aa2.31□□□□□ -2.04
PTPRC-205ENST00000391970 GOLGA6L4A6NEF3 574 aa2.31□□□□□ -2.04
PTPRC-205ENST00000391970 PP2D1A8MPX8 630 aa2.31□□□□□ -2.04
PTPRC-205ENST00000391970 B4DXG7 233 aa2.31□□□□□ -2.04
PTPRC-205ENST00000391970 H3BMQ9 156 aa2.31□□□□□ -2.04
PTPRC-205ENST00000391970 BTN3A3O00478 584 aa2.31□□□□□ -2.04
PTPRC-205ENST00000391970 MSH4O15457 936 aa2.31□□□□□ -2.04
PTPRC-205ENST00000391970 MGRN1O60291 552 aa2.31□□□□□ -2.04
PTPRC-205ENST00000391970 SPAG6O75602 509 aa2.31□□□□□ -2.04
PTPRC-205ENST00000391970 GPX5O75715 221 aa2.31□□□□□ -2.04
PTPRC-205ENST00000391970 ERLIN2O94905 339 aa2.31□□□□□ -2.04
PTPRC-205ENST00000391970 CA1P00915 261 aaPredicted RBP2.31□□□□□ -2.04
PTPRC-205ENST00000391970 RPSAP08865 295 aaKnown RBP2.31□□□□□ -2.04
PTPRC-205ENST00000391970 H2BFMP0C1H6 154 aa2.31□□□□□ -2.04
PTPRC-205ENST00000391970 PNMA6AP0CW24 399 aaPredicted RBP2.31□□□□□ -2.04
PTPRC-205ENST00000391970 TROVE2P10155 538 aaKnown RBP eCLIP2.31□□□□□ -2.04
PTPRC-205ENST00000391970 GZMAP12544 262 aa2.31□□□□□ -2.04
PTPRC-205ENST00000391970 SERPINA2P20848 420 aa2.31□□□□□ -2.04
PTPRC-205ENST00000391970 ZP3P21754 424 aa2.31□□□□□ -2.04
PTPRC-205ENST00000391970 PRKAR2BP31323 418 aa2.31□□□□□ -2.04
PTPRC-205ENST00000391970 CD80P33681 288 aa2.31□□□□□ -2.04
PTPRC-205ENST00000391970 DHPSP49366 369 aaPredicted RBP2.31□□□□□ -2.04
PTPRC-205ENST00000391970 HNMTP50135 292 aa2.31□□□□□ -2.04
PTPRC-205ENST00000391970 CCNG1P51959 295 aa2.31□□□□□ -2.04
PTPRC-205ENST00000391970 EFNA3P52797 238 aa2.31□□□□□ -2.04
PTPRC-205ENST00000391970 ARFIP1P53367 373 aa2.31□□□□□ -2.04
PTPRC-205ENST00000391970 DYNC1I2Q13409 638 aaKnown RBP2.31□□□□□ -2.04
PTPRC-205ENST00000391970 MAPRE2Q15555 327 aa2.31□□□□□ -2.04
PTPRC-205ENST00000391970 PRR4Q16378 134 aa2.31□□□□□ -2.04
PTPRC-205ENST00000391970 SYPL1Q16563 259 aa2.31□□□□□ -2.04
PTPRC-205ENST00000391970 NDUFA5Q16718 116 aa2.31□□□□□ -2.04
PTPRC-205ENST00000391970 KRT71Q3SY84 523 aa2.31□□□□□ -2.04
PTPRC-205ENST00000391970 GGTA1PQ4G0N0 100 aa2.31□□□□□ -2.04
PTPRC-205ENST00000391970 SBK1Q52WX2 424 aa2.31□□□□□ -2.04
PTPRC-205ENST00000391970 SMUG1Q53HV7 270 aa2.31□□□□□ -2.04
PTPRC-205ENST00000391970 CFAP157Q5JU67 520 aa2.31□□□□□ -2.04
PTPRC-205ENST00000391970 METTL11BQ5VVY1 283 aa2.31□□□□□ -2.04
PTPRC-205ENST00000391970 OR5M10Q6IEU7 315 aa2.31□□□□□ -2.04
PTPRC-205ENST00000391970 FAM71F2Q6NXP2 309 aa2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms