RNA–Protein interactions for RNA: ENST00000390484.1

TRAJ54-201, Transcript of T cell receptor alpha joining 54, humanhuman

APPRIS P1 BASIC

Gene TRAJ54, Length 60 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ54-201ENST00000390484 ZNF93P35789 620 aaPredicted RBP-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 AHRP35869 848 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 HMGCLP35914 325 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 PSMC2P35998 433 aaKnown RBP-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 TCF7P36402 384 aaPredicted RBP-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 NUP62P37198 522 aaPredicted RBP-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 FDFT1P37268 417 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 RPL3P39023 403 aaKnown RBP-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 MMP12P39900 470 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 CAPGP40121 348 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 CEACAM6P40199 344 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 PSMB10P40306 273 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 PBX3P40426 434 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 SLC26A3P40879 764 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 RFC3P40938 356 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 ID1P41134 155 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 P2RY2P41231 377 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 NBL1P41271 181 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 MAP3K8P41279 467 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 CD86P42081 329 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 TMPOP42166 694 aaKnown RBP-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 STAT1P42224 750 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 SKIV2L2P42285 1042 aaKnown RBP-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 PIK3CAP42336 1068 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 CASP3P42574 277 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 MATKP42679 507 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 FRKP42685 505 aaPredicted RBP-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 CDKN2BP42772 138 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 PRCPP42785 496 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 CXCL5P42830 114 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 NSG1P42857 185 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 SLC1A3P43003 542 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 PAFAH1B1P43034 410 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 PTGFRP43088 359 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 GLP1RP43220 463 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 MATR3P43243 847 aaKnown RBP eCLIP-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 MSH2P43246 934 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 GRK6P43250 576 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 GPD2P43304 727 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 MAGEA5P43359 124 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 MAGEB1P43366 347 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 SYKP43405 635 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 PSMC4P43686 418 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 VDAC2P45880 294 aaPredicted RBP-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 RANGAP1P46060 587 aaPredicted RBP-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 XCR1P46094 333 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 CRKLP46109 303 aaKnown RBP-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 GSTM5P46439 218 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 NSFP46459 744 aaKnown RBP-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 CDKN1BP46527 198 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 RPS9P46781 194 aaKnown RBP-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 GNPDA1P46926 289 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 YAP1P46937 504 aaKnown RBP-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 GYG1P46976 350 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 GALR1P47211 349 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 CAPZA2P47755 286 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 OR3A4PP47883 348 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 OR1G1P47890 313 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 QARSP47897 775 aaKnown RBP-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 HTR5AP47898 357 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 RPL29P47914 159 aaKnown RBP-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 UQCRFS1P47985 274 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 KCNJ4P48050 445 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 PCP4P48539 62 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 NMUP48645 174 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 SLC1A6P48664 564 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 CSNK1A1P48729 337 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 IDH2P48735 452 aaKnown RBP-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 SLC9A3P48764 834 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 TRPC1P48995 793 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 HCAR3P49019 387 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 TGM4P49221 684 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 LMAN1P49257 510 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 DHPSP49366 369 aaPredicted RBP-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 INPP1P49441 399 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 AARSP49588 968 aaKnown RBP eCLIP-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 EVX1P49640 407 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 CASP4P49662 377 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 PRLHRP49683 370 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 MCM2P49736 904 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 ACADVLP49748 655 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 NUMBP49757 651 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 RGS7P49802 495 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 STK19P49842 368 aaPredicted RBP-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 KLK7P49862 253 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 ENTPD1P49961 510 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 GNAQP50148 359 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 NPY4RP50391 375 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 SERPINH1P50454 418 aaKnown RBP-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 ASCL1P50553 236 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 TNFSF10P50591 281 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 RPL14P50914 215 aaKnown RBP-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 GZMMP51124 257 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 DAPP51397 102 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 DAP3P51398 398 aaKnown RBP-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 DUSP3P51452 185 aaPredicted RBP-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 ZNF80P51504 273 aaPredicted RBP-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 NOVA1P51513 510 aaKnown RBP-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 ZNF83P51522 516 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 DNA2P51530 1060 aa-0.09□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms