RNA–Protein interactions for RNA: ENST00000390467.3

TRAV40-201, Transcript of T cell receptor alpha variable 40, humanhuman

APPRIS P1 BASIC

Gene TRAV40, Length 317 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40-201ENST00000390467 KIF16BQ96L93 1317 aa1.69□□□□□ -2.14
TRAV40-201ENST00000390467 CTAGE15A4D2H0 777 aa1.69□□□□□ -2.14
TRAV40-201ENST00000390467 GPR89AB7ZAQ6 455 aa1.69□□□□□ -2.14
TRAV40-201ENST00000390467 CXCL11O14625 94 aa1.69□□□□□ -2.14
TRAV40-201ENST00000390467 NBR2O15453 112 aa1.69□□□□□ -2.14
TRAV40-201ENST00000390467 SPOPO43791 374 aa1.69□□□□□ -2.14
TRAV40-201ENST00000390467 TRIM3O75382 744 aaPredicted RBP1.69□□□□□ -2.14
TRAV40-201ENST00000390467 YEATS4O95619 227 aa1.69□□□□□ -2.14
TRAV40-201ENST00000390467 NPPAP01160 153 aa1.69□□□□□ -2.14
TRAV40-201ENST00000390467 IGKV1-17P01599 117 aa1.69□□□□□ -2.14
TRAV40-201ENST00000390467 GPR89BP0CG08 455 aa1.69□□□□□ -2.14
TRAV40-201ENST00000390467 THRBP10828 461 aa1.69□□□□□ -2.14
TRAV40-201ENST00000390467 XRCC1P18887 633 aaPredicted RBP1.69□□□□□ -2.14
TRAV40-201ENST00000390467 DNAJB1P25685 340 aa1.69□□□□□ -2.14
TRAV40-201ENST00000390467 DLSTP36957 453 aa1.69□□□□□ -2.14
TRAV40-201ENST00000390467 CASP3P42574 277 aa1.69□□□□□ -2.14
TRAV40-201ENST00000390467 RPS9P46781 194 aaKnown RBP1.69□□□□□ -2.14
TRAV40-201ENST00000390467 RABIFP47224 123 aa1.69□□□□□ -2.14
TRAV40-201ENST00000390467 CAMLGP49069 296 aa1.69□□□□□ -2.14
TRAV40-201ENST00000390467 ZNF136P52737 540 aa1.69□□□□□ -2.14
TRAV40-201ENST00000390467 GBX2P52951 348 aaPredicted RBP1.69□□□□□ -2.14
TRAV40-201ENST00000390467 GMFBP60983 142 aa1.69□□□□□ -2.14
TRAV40-201ENST00000390467 CCDC173Q0VFZ6 552 aa1.69□□□□□ -2.14
TRAV40-201ENST00000390467 SLAQ13239 276 aa1.69□□□□□ -2.14
TRAV40-201ENST00000390467 STK11Q15831 433 aa1.69□□□□□ -2.14
TRAV40-201ENST00000390467 INAQ16352 499 aa1.69□□□□□ -2.14
TRAV40-201ENST00000390467 CCDC40Q4G0X9 1142 aa1.69□□□□□ -2.14
TRAV40-201ENST00000390467 OR52W1Q6IF63 320 aa1.69□□□□□ -2.14
TRAV40-201ENST00000390467 CENPPQ6IPU0 288 aa1.69□□□□□ -2.14
TRAV40-201ENST00000390467 SLC25A24Q6NUK1 477 aa1.69□□□□□ -2.14
TRAV40-201ENST00000390467 CYS1Q717R9 158 aa1.69□□□□□ -2.14
TRAV40-201ENST00000390467 CCDC80Q76M96 950 aa1.69□□□□□ -2.14
TRAV40-201ENST00000390467 RABEPKQ7Z6M1 372 aa1.69□□□□□ -2.14
TRAV40-201ENST00000390467 CTAGE6Q86UF2 777 aa1.69□□□□□ -2.14
TRAV40-201ENST00000390467 CCDC65Q8IXS2 484 aa1.69□□□□□ -2.14
TRAV40-201ENST00000390467 SLC7A5P1Q8MH63 180 aa1.69□□□□□ -2.14
TRAV40-201ENST00000390467 CNNM3Q8NE01 707 aa1.69□□□□□ -2.14
TRAV40-201ENST00000390467 TMEM185AQ8NFB2 350 aa1.69□□□□□ -2.14
TRAV40-201ENST00000390467 AGR3Q8TD06 166 aa1.69□□□□□ -2.14
TRAV40-201ENST00000390467 PHF10Q8WUB8 498 aaKnown RBP1.69□□□□□ -2.14
TRAV40-201ENST00000390467 FAM151AQ8WW52 585 aa1.69□□□□□ -2.14
TRAV40-201ENST00000390467 TMEM158Q8WZ71 300 aa1.69□□□□□ -2.14
TRAV40-201ENST00000390467 SPATA13Q96N96 652 aa1.69□□□□□ -2.14
TRAV40-201ENST00000390467 MCHR1Q99705 422 aa1.69□□□□□ -2.14
TRAV40-201ENST00000390467 COQ7Q99807 217 aa1.69□□□□□ -2.14
TRAV40-201ENST00000390467 GCOM2Q9BZD3 368 aaPredicted RBP1.69□□□□□ -2.14
TRAV40-201ENST00000390467 MAGT1Q9H0U3 335 aa1.69□□□□□ -2.14
TRAV40-201ENST00000390467 CLSTN2Q9H4D0 955 aa1.69□□□□□ -2.14
TRAV40-201ENST00000390467 COG4Q9H9E3 785 aa1.69□□□□□ -2.14
TRAV40-201ENST00000390467 PRMT8Q9NR22 394 aaPredicted RBP1.69□□□□□ -2.14
TRAV40-201ENST00000390467 GDAP2Q9NXN4 497 aa1.69□□□□□ -2.14
TRAV40-201ENST00000390467 RBAKQ9NYW8 714 aaPredicted RBP1.69□□□□□ -2.14
TRAV40-201ENST00000390467 UBAP1Q9NZ09 502 aa1.69□□□□□ -2.14
TRAV40-201ENST00000390467 COX16Q9P0S2 106 aa1.69□□□□□ -2.14
TRAV40-201ENST00000390467 DCDC2Q9UHG0 476 aa1.69□□□□□ -2.14
TRAV40-201ENST00000390467 TBX21Q9UL17 535 aa1.69□□□□□ -2.14
TRAV40-201ENST00000390467 ZNF490Q9ULM2 529 aaPredicted RBP1.69□□□□□ -2.14
TRAV40-201ENST00000390467 NEUROG3Q9Y4Z2 214 aa1.69□□□□□ -2.14
TRAV40-201ENST00000390467 GMPPBQ9Y5P6 360 aa1.69□□□□□ -2.14
TRAV40-201ENST00000390467 PCM1Q15154 2024 aa1.69□□□□□ -2.14
TRAV40-201ENST00000390467 ATP8B3O60423 1300 aa1.68□□□□□ -2.14
TRAV40-201ENST00000390467 TTC41PQ6P2S7 1318 aa1.68□□□□□ -2.14
TRAV40-201ENST00000390467 WDR19Q8NEZ3 1342 aa1.68□□□□□ -2.14
TRAV40-201ENST00000390467 GOLGA6L7A0A1B0GV03 622 aa1.68□□□□□ -2.14
TRAV40-201ENST00000390467 LRRIQ4A6NIV6 560 aa1.68□□□□□ -2.14
TRAV40-201ENST00000390467 H0YIV9 168 aa1.68□□□□□ -2.14
TRAV40-201ENST00000390467 CETN3O15182 167 aa1.68□□□□□ -2.14
TRAV40-201ENST00000390467 ZNF780AO75290 641 aaPredicted RBP1.68□□□□□ -2.14
TRAV40-201ENST00000390467 SPAG6O75602 509 aa1.68□□□□□ -2.14
TRAV40-201ENST00000390467 UFL1O94874 794 aa1.68□□□□□ -2.14
TRAV40-201ENST00000390467 S100A6P06703 90 aa1.68□□□□□ -2.14
TRAV40-201ENST00000390467 ABHD2P08910 425 aa1.68□□□□□ -2.14
TRAV40-201ENST00000390467 TPM1P09493 284 aa1.68□□□□□ -2.14
TRAV40-201ENST00000390467 POLR2MP0CAP2 368 aa1.68□□□□□ -2.14
TRAV40-201ENST00000390467 TSPAN8P19075 237 aa1.68□□□□□ -2.14
TRAV40-201ENST00000390467 EPS15P42566 896 aa1.68□□□□□ -2.14
TRAV40-201ENST00000390467 GNPDA1P46926 289 aa1.68□□□□□ -2.14
TRAV40-201ENST00000390467 MNAT1P51948 309 aa1.68□□□□□ -2.14
TRAV40-201ENST00000390467 ATXN3P54252 364 aaPredicted RBP1.68□□□□□ -2.14
TRAV40-201ENST00000390467 HADHBP55084 474 aaKnown RBP1.68□□□□□ -2.14
TRAV40-201ENST00000390467 MYBPC1Q00872 1141 aa1.68□□□□□ -2.14
TRAV40-201ENST00000390467 GABPB1Q06547 395 aaPredicted RBP1.68□□□□□ -2.14
TRAV40-201ENST00000390467 ELP6Q0PNE2 266 aa1.68□□□□□ -2.14
TRAV40-201ENST00000390467 CHIT1Q13231 466 aa1.68□□□□□ -2.14
TRAV40-201ENST00000390467 SNX1Q13596 522 aa1.68□□□□□ -2.14
TRAV40-201ENST00000390467 GGTLC2Q14390 218 aa1.68□□□□□ -2.14
TRAV40-201ENST00000390467 CARTPTQ16568 116 aa1.68□□□□□ -2.14
TRAV40-201ENST00000390467 CCDC57Q2TAC2 916 aa1.68□□□□□ -2.14
TRAV40-201ENST00000390467 CCDC152Q4G0S7 254 aa1.68□□□□□ -2.14
TRAV40-201ENST00000390467 HSP90AA5PQ58FG0 334 aa1.68□□□□□ -2.14
TRAV40-201ENST00000390467 GPR157Q5UAW9 335 aa1.68□□□□□ -2.14
TRAV40-201ENST00000390467 TTC19Q6DKK2 380 aaPredicted RBP1.68□□□□□ -2.14
TRAV40-201ENST00000390467 WDR74Q6RFH5 385 aaPredicted RBP1.68□□□□□ -2.14
TRAV40-201ENST00000390467 CLEC2AQ6UVW9 174 aa1.68□□□□□ -2.14
TRAV40-201ENST00000390467 C1orf186Q6ZWK4 172 aa1.68□□□□□ -2.14
TRAV40-201ENST00000390467 CENPQQ7L2Z9 268 aaPredicted RBP1.68□□□□□ -2.14
TRAV40-201ENST00000390467 SPATA24Q86W54 205 aa1.68□□□□□ -2.14
TRAV40-201ENST00000390467 ZNF695Q8IW36 515 aa1.68□□□□□ -2.14
TRAV40-201ENST00000390467 CNTN4Q8IWV2 1026 aa1.68□□□□□ -2.14
TRAV40-201ENST00000390467 FAM133AQ8N9E0 248 aa1.68□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms