RNA–Protein interactions for RNA: ENST00000389328.8

TRAPPC9-201, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2 BASIC

Gene TRAPPC9, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-201ENST00000389328 PTBP1P26599 531 aaKnown RBP eCLIP12.25□□□□□ -0.452e-7■■■■■ 27.6
TRAPPC9-201ENST00000389328 S100A11P31949 105 aa12.25□□□□□ -0.45
TRAPPC9-201ENST00000389328 VIPR2P41587 438 aa12.25□□□□□ -0.45
TRAPPC9-201ENST00000389328 HERVK_113Q902F9 699 aa12.25□□□□□ -0.45
TRAPPC9-201ENST00000389328 GCDHQ92947 438 aaPredicted RBP12.25□□□□□ -0.45
TRAPPC9-201ENST00000389328 TRMT2BQ96GJ1 504 aaKnown RBP12.25□□□□□ -0.45
TRAPPC9-201ENST00000389328 ZNF559Q9BR84 538 aa12.25□□□□□ -0.45
TRAPPC9-201ENST00000389328 SPNS1Q9H2V7 528 aa12.25□□□□□ -0.45
TRAPPC9-201ENST00000389328 NOX4Q9NPH5 578 aa12.25□□□□□ -0.45
TRAPPC9-201ENST00000389328 CAMK2AQ9UQM7 478 aa12.25□□□□□ -0.45
TRAPPC9-201ENST00000389328 CCL26Q9Y258 94 aa12.25□□□□□ -0.45
TRAPPC9-201ENST00000389328 ATG4BQ9Y4P1 393 aa12.25□□□□□ -0.45
TRAPPC9-201ENST00000389328 ASCC3Q8N3C0 2202 aaKnown RBP12.24□□□□□ -0.45
TRAPPC9-201ENST00000389328 DCNP07585 359 aaKnown RBP12.24□□□□□ -0.45
TRAPPC9-201ENST00000389328 SFTPBP07988 381 aa12.24□□□□□ -0.45
TRAPPC9-201ENST00000389328 ZNF888P0CJ79 500 aaPredicted RBP12.24□□□□□ -0.45
TRAPPC9-201ENST00000389328 FPR3P25089 353 aa12.24□□□□□ -0.45
TRAPPC9-201ENST00000389328 DLSTP36957 453 aa12.24□□□□□ -0.45
TRAPPC9-201ENST00000389328 TPMTP51580 245 aa12.24□□□□□ -0.45
TRAPPC9-201ENST00000389328 SIRPAP78324 504 aa12.24□□□□□ -0.45
TRAPPC9-201ENST00000389328 FOXK2Q01167 660 aa12.24□□□□□ -0.45
TRAPPC9-201ENST00000389328 NOGQ13253 232 aa12.24□□□□□ -0.45
TRAPPC9-201ENST00000389328 RAB11BQ15907 218 aa12.24□□□□□ -0.45
TRAPPC9-201ENST00000389328 ALG11Q2TAA5 492 aa12.24□□□□□ -0.45
TRAPPC9-201ENST00000389328 FAAP20Q6NZ36 180 aa12.24□□□□□ -0.45
TRAPPC9-201ENST00000389328 SLC38A6Q8IZM9 456 aa12.24□□□□□ -0.45
TRAPPC9-201ENST00000389328 METTL27Q8N6F8 245 aaPredicted RBP12.24□□□□□ -0.45
TRAPPC9-201ENST00000389328 SLC16A11Q8NCK7 471 aa12.24□□□□□ -0.45
TRAPPC9-201ENST00000389328 OR10K1Q8NGX5 313 aa12.24□□□□□ -0.45
TRAPPC9-201ENST00000389328 UCN3Q969E3 161 aa12.24□□□□□ -0.45
TRAPPC9-201ENST00000389328 TBL1XR1Q9BZK7 514 aa12.24□□□□□ -0.45
TRAPPC9-201ENST00000389328 COL5A3P25940 1745 aaPredicted RBP12.24□□□□□ -0.45
TRAPPC9-201ENST00000389328 SLC5A10A0PJK1 596 aa12.24□□□□□ -0.45
TRAPPC9-201ENST00000389328 LGALS8O00214 317 aa12.24□□□□□ -0.45
TRAPPC9-201ENST00000389328 TMPRSS11DO60235 418 aa12.24□□□□□ -0.45
TRAPPC9-201ENST00000389328 SDC3O75056 442 aa12.24□□□□□ -0.45
TRAPPC9-201ENST00000389328 LSSP48449 732 aa12.24□□□□□ -0.45
TRAPPC9-201ENST00000389328 GPR143P51810 404 aa12.24□□□□□ -0.45
TRAPPC9-201ENST00000389328 SQSTM1Q13501 440 aa12.24□□□□□ -0.45
TRAPPC9-201ENST00000389328 EXOSC7Q15024 291 aaKnown RBP12.24□□□□□ -0.45
TRAPPC9-201ENST00000389328 C17orf107Q6ZR85 190 aa12.24□□□□□ -0.45
TRAPPC9-201ENST00000389328 GAREM2Q75VX8 874 aa12.24□□□□□ -0.45
TRAPPC9-201ENST00000389328 ZNF416Q9BWM5 594 aa12.24□□□□□ -0.45
TRAPPC9-201ENST00000389328 CERS4Q9HA82 394 aa12.24□□□□□ -0.45
TRAPPC9-201ENST00000389328 INPP5EQ9NRR6 644 aa12.24□□□□□ -0.45
TRAPPC9-201ENST00000389328 PLEKHB1Q9UF11 243 aaPredicted RBP12.24□□□□□ -0.45
TRAPPC9-201ENST00000389328 FBXL21Q9UKT6 434 aa12.24□□□□□ -0.45
TRAPPC9-201ENST00000389328 KCNE1BA0A087WTH5 132 aa12.24□□□□□ -0.45
TRAPPC9-201ENST00000389328 PPM1BO75688 479 aa12.24□□□□□ -0.45
TRAPPC9-201ENST00000389328 PLGP00747 810 aaPredicted RBP12.24□□□□□ -0.45
TRAPPC9-201ENST00000389328 IGHA2P01877 340 aa12.24□□□□□ -0.45
TRAPPC9-201ENST00000389328 ZNF14P17017 642 aaPredicted RBP12.24□□□□□ -0.45
TRAPPC9-201ENST00000389328 ZNF20P17024 532 aa12.24□□□□□ -0.45
TRAPPC9-201ENST00000389328 GZMMP51124 257 aa12.24□□□□□ -0.45
TRAPPC9-201ENST00000389328 PDX1P52945 283 aa12.24□□□□□ -0.45
TRAPPC9-201ENST00000389328 HCCSP53701 268 aa12.24□□□□□ -0.45
TRAPPC9-201ENST00000389328 RIPPLY1Q0D2K3 151 aa12.24□□□□□ -0.45
TRAPPC9-201ENST00000389328 PM20D2Q8IYS1 436 aa12.24□□□□□ -0.45
TRAPPC9-201ENST00000389328 OR4C15Q8NGM1 316 aa12.24□□□□□ -0.45
TRAPPC9-201ENST00000389328 SEC22AQ96IW7 307 aa12.24□□□□□ -0.45
TRAPPC9-201ENST00000389328 PTCHD1Q96NR3 888 aa12.24□□□□□ -0.45
TRAPPC9-201ENST00000389328 WSB2Q9NYS7 404 aaPredicted RBP12.24□□□□□ -0.45
TRAPPC9-201ENST00000389328 MEMO1Q9Y316 297 aa12.24□□□□□ -0.45
TRAPPC9-201ENST00000389328 ATP1B1P05026 303 aa12.23□□□□□ -0.45
TRAPPC9-201ENST00000389328 OR8G3PP0DMU2 310 aa12.23□□□□□ -0.45
TRAPPC9-201ENST00000389328 PPP3CBP16298 524 aa12.23□□□□□ -0.45
TRAPPC9-201ENST00000389328 NAT1P18440 290 aa12.23□□□□□ -0.45
TRAPPC9-201ENST00000389328 S1PR1P21453 382 aa12.23□□□□□ -0.45
TRAPPC9-201ENST00000389328 ACTBP60709 375 aa12.23□□□□□ -0.45
TRAPPC9-201ENST00000389328 ACTG1P63261 375 aa12.23□□□□□ -0.45
TRAPPC9-201ENST00000389328 RAE1P78406 368 aaKnown RBP12.23□□□□□ -0.45
TRAPPC9-201ENST00000389328 PRDX1Q06830 199 aaKnown RBP12.23□□□□□ -0.45
TRAPPC9-201ENST00000389328 CAMK2BQ13554 666 aa12.23□□□□□ -0.45
TRAPPC9-201ENST00000389328 DUSP6Q16828 381 aa12.23□□□□□ -0.45
TRAPPC9-201ENST00000389328 GRAMD2AQ8IUY3 354 aa12.23□□□□□ -0.45
TRAPPC9-201ENST00000389328 ZNF619Q8N2I2 560 aa12.23□□□□□ -0.45
TRAPPC9-201ENST00000389328 CD300LFQ8TDQ1 290 aa12.23□□□□□ -0.45
TRAPPC9-201ENST00000389328 DPF3Q92784 378 aa12.23□□□□□ -0.45
TRAPPC9-201ENST00000389328 ZNF878C9JN71 531 aa12.23□□□□□ -0.45
TRAPPC9-201ENST00000389328 K7ESM1 405 aa12.23□□□□□ -0.45
TRAPPC9-201ENST00000389328 PLA2G10O15496 165 aa12.23□□□□□ -0.45
TRAPPC9-201ENST00000389328 M6PRP20645 277 aa12.23□□□□□ -0.45
TRAPPC9-201ENST00000389328 AANATQ16613 207 aa12.23□□□□□ -0.45
TRAPPC9-201ENST00000389328 DECR1Q16698 335 aa12.23□□□□□ -0.45
TRAPPC9-201ENST00000389328 UBE2NLQ5JXB2 153 aa12.23□□□□□ -0.45
TRAPPC9-201ENST00000389328 OR52I2Q8NH67 350 aa12.23□□□□□ -0.45
TRAPPC9-201ENST00000389328 ST8SIA2Q92186 375 aa12.23□□□□□ -0.45
TRAPPC9-201ENST00000389328 MED18Q9BUE0 208 aa12.23□□□□□ -0.45
TRAPPC9-201ENST00000389328 MIXL1Q9H2W2 232 aa12.23□□□□□ -0.45
TRAPPC9-201ENST00000389328 RNF186Q9NXI6 227 aa12.23□□□□□ -0.45
TRAPPC9-201ENST00000389328 SOX1O00570 391 aaPredicted RBP12.23□□□□□ -0.45
TRAPPC9-201ENST00000389328 CHRM4P08173 479 aa12.23□□□□□ -0.45
TRAPPC9-201ENST00000389328 NPR2P20594 1047 aa12.23□□□□□ -0.45
TRAPPC9-201ENST00000389328 CCR9P51686 369 aa12.23□□□□□ -0.45
TRAPPC9-201ENST00000389328 DCST2Q5T1A1 773 aa12.23□□□□□ -0.45
TRAPPC9-201ENST00000389328 C12orf73Q69YU5 71 aa12.23□□□□□ -0.45
TRAPPC9-201ENST00000389328 HEPHL1Q6MZM0 1159 aa12.23□□□□□ -0.45
TRAPPC9-201ENST00000389328 TSSK4Q6SA08 328 aa12.23□□□□□ -0.45
TRAPPC9-201ENST00000389328 CD300LGQ6UXG3 332 aa12.23□□□□□ -0.45
TRAPPC9-201ENST00000389328 NUP54Q7Z3B4 507 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms