RNA–Protein interactions for RNA: ENST00000380393.7

PTPRA-204, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 1 (best) BASIC

Gene PTPRA, Length 3,636 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-204ENST00000380393 TAS2R10Q9NYW0 307 aa8.71□□□□□ -1.01
PTPRA-204ENST00000380393 RCC2Q9P258 522 aaKnown RBP8.71□□□□□ -1.01
PTPRA-204ENST00000380393 AKT3Q9Y243 479 aa8.71□□□□□ -1.01
PTPRA-204ENST00000380393 TNFSF13BQ9Y275 285 aa8.71□□□□□ -1.01
PTPRA-204ENST00000380393 NUP205Q92621 2012 aa8.71□□□□□ -1.02
PTPRA-204ENST00000380393 A0A0G2JN53 185 aa8.71□□□□□ -1.02
PTPRA-204ENST00000380393 C2orf92A0A1B0GVN3 265 aa8.71□□□□□ -1.02
PTPRA-204ENST00000380393 MOXD2PA6NHM9 499 aa8.71□□□□□ -1.02
PTPRA-204ENST00000380393 PPP1R2P9O14990 202 aa8.71□□□□□ -1.02
PTPRA-204ENST00000380393 SURF4O15260 269 aa8.71□□□□□ -1.02
PTPRA-204ENST00000380393 PRAMEF12O95522 483 aa8.71□□□□□ -1.02
PTPRA-204ENST00000380393 CYB5R3P00387 301 aaPredicted RBP8.71□□□□□ -1.02
PTPRA-204ENST00000380393 FABP4P15090 132 aa8.71□□□□□ -1.02
PTPRA-204ENST00000380393 LMO2P25791 158 aa8.71□□□□□ -1.02
PTPRA-204ENST00000380393 CEACAM8P31997 349 aaPredicted RBP8.71□□□□□ -1.02
PTPRA-204ENST00000380393 CNR2P34972 360 aa8.71□□□□□ -1.02
PTPRA-204ENST00000380393 FEN1P39748 380 aaKnown RBP8.71□□□□□ -1.02
PTPRA-204ENST00000380393 DLX5P56178 289 aa8.71□□□□□ -1.02
PTPRA-204ENST00000380393 NOGQ13253 232 aa8.71□□□□□ -1.02
PTPRA-204ENST00000380393 ZNF235Q14590 738 aa8.71□□□□□ -1.02
PTPRA-204ENST00000380393 PTGES3Q15185 160 aaKnown RBP8.71□□□□□ -1.02
PTPRA-204ENST00000380393 RBBP7Q16576 425 aa8.71□□□□□ -1.02
PTPRA-204ENST00000380393 MESTQ5EB52 335 aa8.71□□□□□ -1.02
PTPRA-204ENST00000380393 ATG9BQ674R7 924 aa8.71□□□□□ -1.02
PTPRA-204ENST00000380393 NCR3LG1Q68D85 454 aa8.71□□□□□ -1.02
PTPRA-204ENST00000380393 METTL7BQ6UX53 244 aa8.71□□□□□ -1.02
PTPRA-204ENST00000380393 ALKAL1Q6UXT8 129 aa8.71□□□□□ -1.02
PTPRA-204ENST00000380393 DCXRQ7Z4W1 244 aa8.71□□□□□ -1.02
PTPRA-204ENST00000380393 FAM185AQ8N0U4 392 aa8.71□□□□□ -1.02
PTPRA-204ENST00000380393 ZNF664Q8N3J9 261 aa8.71□□□□□ -1.02
PTPRA-204ENST00000380393 BPIFB2Q8N4F0 458 aa8.71□□□□□ -1.02
PTPRA-204ENST00000380393 OR11G2Q8NGC1 345 aa8.71□□□□□ -1.02
PTPRA-204ENST00000380393 OR56B1Q8NGI3 324 aa8.71□□□□□ -1.02
PTPRA-204ENST00000380393 OR1J4Q8NGS1 313 aa8.71□□□□□ -1.02
PTPRA-204ENST00000380393 EDEM1Q92611 657 aa8.71□□□□□ -1.02
PTPRA-204ENST00000380393 MVB12AQ96EY5 273 aa8.71□□□□□ -1.02
PTPRA-204ENST00000380393 OR2M4Q96R27 311 aa8.71□□□□□ -1.02
PTPRA-204ENST00000380393 TAAR9Q96RI9 348 aa8.71□□□□□ -1.02
PTPRA-204ENST00000380393 UBL7Q96S82 380 aaPredicted RBP8.71□□□□□ -1.02
PTPRA-204ENST00000380393 ZNF382Q96SR6 550 aa8.71□□□□□ -1.02
PTPRA-204ENST00000380393 EPYCQ99645 322 aa8.71□□□□□ -1.02
PTPRA-204ENST00000380393 SMOQ99835 787 aa8.71□□□□□ -1.02
PTPRA-204ENST00000380393 ADAM2Q99965 735 aa8.71□□□□□ -1.02
PTPRA-204ENST00000380393 TBL1YQ9BQ87 522 aa8.71□□□□□ -1.02
PTPRA-204ENST00000380393 TRPC4Q9UBN4 977 aa8.71□□□□□ -1.02
PTPRA-204ENST00000380393 NEU3Q9UQ49 428 aa8.71□□□□□ -1.02
PTPRA-204ENST00000380393 TCRBV21S2A2A0A5A6 115 aa8.71□□□□□ -1.02
PTPRA-204ENST00000380393 F5H5P2 479 aa8.71□□□□□ -1.02
PTPRA-204ENST00000380393 TP53I11O14683 189 aa8.71□□□□□ -1.02
PTPRA-204ENST00000380393 SCAF4O95104 1147 aaKnown RBP8.71□□□□□ -1.02
PTPRA-204ENST00000380393 VNN2O95498 520 aa8.71□□□□□ -1.02
PTPRA-204ENST00000380393 PCCBP05166 539 aa8.71□□□□□ -1.02
PTPRA-204ENST00000380393 ERCC1P07992 297 aaPredicted RBP8.71□□□□□ -1.02
PTPRA-204ENST00000380393 BCKDHAP12694 445 aa8.71□□□□□ -1.02
PTPRA-204ENST00000380393 PSMB1P20618 241 aaKnown RBP8.71□□□□□ -1.02
PTPRA-204ENST00000380393 CCND3P30281 292 aaPredicted RBP8.71□□□□□ -1.02
PTPRA-204ENST00000380393 CDC34P49427 236 aaPredicted RBP8.71□□□□□ -1.02
PTPRA-204ENST00000380393 ARHGAP1Q07960 439 aa8.71□□□□□ -1.02
PTPRA-204ENST00000380393 PPIGQ13427 754 aaKnown RBP eCLIP8.71□□□□□ -1.027e-7■■■□□ 17
PTPRA-204ENST00000380393 TTLL4Q14679 1199 aa8.71□□□□□ -1.02
PTPRA-204ENST00000380393 SLC10A6Q3KNW5 377 aa8.71□□□□□ -1.02
PTPRA-204ENST00000380393 HECTD2Q5U5R9 776 aa8.71□□□□□ -1.02
PTPRA-204ENST00000380393 OR2A2Q6IF42 318 aa8.71□□□□□ -1.02
PTPRA-204ENST00000380393 NCEH1Q6PIU2 408 aa8.71□□□□□ -1.02
PTPRA-204ENST00000380393 MEX3BQ6ZN04 569 aaKnown RBP8.71□□□□□ -1.02
PTPRA-204ENST00000380393 ZNF620Q6ZNG0 422 aa8.71□□□□□ -1.02
PTPRA-204ENST00000380393 HFE2Q6ZVN8 426 aa8.71□□□□□ -1.02
PTPRA-204ENST00000380393 ISCA2Q86U28 154 aa8.71□□□□□ -1.02
PTPRA-204ENST00000380393 OAFQ86UD1 273 aa8.71□□□□□ -1.02
PTPRA-204ENST00000380393 IQCHQ86VS3 1027 aa8.71□□□□□ -1.02
PTPRA-204ENST00000380393 C7orf61Q8IZ16 206 aa8.71□□□□□ -1.02
PTPRA-204ENST00000380393 ARL14Q8N4G2 192 aa8.71□□□□□ -1.02
PTPRA-204ENST00000380393 OR10AD1Q8NGE0 317 aa8.71□□□□□ -1.02
PTPRA-204ENST00000380393 NUBPLQ8TB37 319 aa8.71□□□□□ -1.02
PTPRA-204ENST00000380393 SH3RF2Q8TEC5 729 aa8.71□□□□□ -1.02
PTPRA-204ENST00000380393 GTPBP3Q969Y2 492 aaKnown RBP8.71□□□□□ -1.02
PTPRA-204ENST00000380393 PTCHD1Q96NR3 888 aa8.71□□□□□ -1.02
PTPRA-204ENST00000380393 OR14A2Q96R54 314 aa8.71□□□□□ -1.02
PTPRA-204ENST00000380393 FKRPQ9H9S5 495 aa8.71□□□□□ -1.02
PTPRA-204ENST00000380393 TPT1P8Q9HAU6 139 aa8.71□□□□□ -1.02
PTPRA-204ENST00000380393 HMX1Q9NP08 348 aaPredicted RBP8.71□□□□□ -1.02
PTPRA-204ENST00000380393 ACKR4Q9NPB9 350 aa8.71□□□□□ -1.02
PTPRA-204ENST00000380393 TMEM138Q9NPI0 162 aa8.71□□□□□ -1.02
PTPRA-204ENST00000380393 C1GALT1Q9NS00 363 aa8.71□□□□□ -1.02
PTPRA-204ENST00000380393 CREBZFQ9NS37 354 aa8.71□□□□□ -1.02
PTPRA-204ENST00000380393 PIGVQ9NUD9 493 aa8.71□□□□□ -1.02
PTPRA-204ENST00000380393 TMEM184CQ9NVA4 438 aa8.71□□□□□ -1.02
PTPRA-204ENST00000380393 DDIT4Q9NX09 232 aa8.71□□□□□ -1.02
PTPRA-204ENST00000380393 FBXL3Q9UKT7 428 aa8.71□□□□□ -1.02
PTPRA-204ENST00000380393 MYADML2A6NDP7 307 aa8.7□□□□□ -1.02
PTPRA-204ENST00000380393 ANKRD61A6NGH8 418 aa8.7□□□□□ -1.02
PTPRA-204ENST00000380393 OR10H3O60404 316 aa8.7□□□□□ -1.02
PTPRA-204ENST00000380393 TSPAN3O60637 253 aa8.7□□□□□ -1.02
PTPRA-204ENST00000380393 SFTPBP07988 381 aa8.7□□□□□ -1.02
PTPRA-204ENST00000380393 S1PR1P21453 382 aa8.7□□□□□ -1.02
PTPRA-204ENST00000380393 RFX3P48380 749 aa8.7□□□□□ -1.02
PTPRA-204ENST00000380393 ZNF84P51523 738 aa8.7□□□□□ -1.02
PTPRA-204ENST00000380393 TLE4Q04727 773 aa8.7□□□□□ -1.02
PTPRA-204ENST00000380393 BCL2L1Q07817 233 aa8.7□□□□□ -1.02
PTPRA-204ENST00000380393 MEF2DQ14814 521 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms