RNA–Protein interactions for RNA: ENST00000380180.7

PDLIM5-205, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-205ENST00000380180 LAT2Q9GZY6 243 aa18.16■□□□□ 0.5
PDLIM5-205ENST00000380180 SLC26A1Q9H2B4 701 aa18.16■□□□□ 0.5
PDLIM5-205ENST00000380180 FGF20Q9NP95 211 aaPredicted RBP18.16■□□□□ 0.5
PDLIM5-205ENST00000380180 COL27A1Q8IZC6 1860 aaPredicted RBP18.16■□□□□ 0.5
PDLIM5-205ENST00000380180 ZNF883P0CG24 379 aa18.16■□□□□ 0.5
PDLIM5-205ENST00000380180 TGFBR1P36897 503 aa18.16■□□□□ 0.5
PDLIM5-205ENST00000380180 ETV5P41161 510 aa18.16■□□□□ 0.5
PDLIM5-205ENST00000380180 ETV1P50549 477 aa18.16■□□□□ 0.5
PDLIM5-205ENST00000380180 FOXK2Q01167 660 aa18.16■□□□□ 0.5
PDLIM5-205ENST00000380180 SPHARQ15513 63 aa18.16■□□□□ 0.5
PDLIM5-205ENST00000380180 PAPD4Q6PIY7 484 aaKnown RBP18.16■□□□□ 0.5
PDLIM5-205ENST00000380180 C16orf47Q6ZP98 133 aaPredicted RBP18.16■□□□□ 0.5
PDLIM5-205ENST00000380180 RTL4Q6ZR62 310 aa18.16■□□□□ 0.5
PDLIM5-205ENST00000380180 PROKR2Q8NFJ6 384 aa18.16■□□□□ 0.5
PDLIM5-205ENST00000380180 TBC1D15Q8TC07 691 aa18.16■□□□□ 0.5
PDLIM5-205ENST00000380180 RHBDD1Q8TEB9 315 aa18.16■□□□□ 0.5
PDLIM5-205ENST00000380180 SGTBQ96EQ0 304 aa18.16■□□□□ 0.5
PDLIM5-205ENST00000380180 SH3YL1Q96HL8 342 aaPredicted RBP18.16■□□□□ 0.5
PDLIM5-205ENST00000380180 ZBTB20Q9HC78 741 aaPredicted RBP18.16■□□□□ 0.5
PDLIM5-205ENST00000380180 RXFP3Q9NSD7 469 aa18.16■□□□□ 0.5
PDLIM5-205ENST00000380180 H2AFY2Q9P0M6 372 aaPredicted RBP18.16■□□□□ 0.5
PDLIM5-205ENST00000380180 IRGMA1A4Y4 181 aa18.15■□□□□ 0.5
PDLIM5-205ENST00000380180 ALG1L2C9J202 215 aa18.15■□□□□ 0.5
PDLIM5-205ENST00000380180 M0R3G1 203 aa18.15■□□□□ 0.5
PDLIM5-205ENST00000380180 NDUFB5O43674 189 aa18.15■□□□□ 0.5
PDLIM5-205ENST00000380180 ACP1P24666 158 aa18.15■□□□□ 0.5
PDLIM5-205ENST00000380180 ZNF117Q03924 483 aa18.15■□□□□ 0.5
PDLIM5-205ENST00000380180 TSTQ16762 297 aaKnown RBP18.15■□□□□ 0.5
PDLIM5-205ENST00000380180 TMEM44Q2T9K0 475 aa18.15■□□□□ 0.5
PDLIM5-205ENST00000380180 MRPL14Q6P1L8 145 aaKnown RBP18.15■□□□□ 0.5
PDLIM5-205ENST00000380180 CXXC5Q7LFL8 322 aaKnown RBP18.15■□□□□ 0.5
PDLIM5-205ENST00000380180 ZBTB46Q86UZ6 589 aa18.15■□□□□ 0.5
PDLIM5-205ENST00000380180 LRRC17Q8N6Y2 441 aa18.15■□□□□ 0.5
PDLIM5-205ENST00000380180 TP53INP1Q96A56 240 aa18.15■□□□□ 0.5
PDLIM5-205ENST00000380180 OTULINQ96BN8 352 aa18.15■□□□□ 0.5
PDLIM5-205ENST00000380180 WDR77Q9BQA1 342 aaPredicted RBP18.15■□□□□ 0.5
PDLIM5-205ENST00000380180 CRB3Q9BUF7 120 aa18.15■□□□□ 0.5
PDLIM5-205ENST00000380180 TBL1XR1Q9BZK7 514 aa18.15■□□□□ 0.5
PDLIM5-205ENST00000380180 MCCC2Q9HCC0 563 aa18.15■□□□□ 0.5
PDLIM5-205ENST00000380180 PPIEQ9UNP9 301 aaKnown RBP18.15■□□□□ 0.5
PDLIM5-205ENST00000380180 A0A1W2PQD3 144 aa18.15■□□□□ 0.5
PDLIM5-205ENST00000380180 ELOA3DA6NLF2 546 aaPredicted RBP18.15■□□□□ 0.5
PDLIM5-205ENST00000380180 C17orf51A8MQB3 221 aa18.15■□□□□ 0.5
PDLIM5-205ENST00000380180 LRRN3E7EW58 273 aa18.15■□□□□ 0.5
PDLIM5-205ENST00000380180 HCRTR2O43614 444 aa18.15■□□□□ 0.5
PDLIM5-205ENST00000380180 GP1BAP07359 652 aa18.15■□□□□ 0.5
PDLIM5-205ENST00000380180 MST1P26927 711 aa18.15■□□□□ 0.5
PDLIM5-205ENST00000380180 ELOA3BQ3SY89 546 aa18.15■□□□□ 0.5
PDLIM5-205ENST00000380180 PLBD1Q6P4A8 553 aa18.15■□□□□ 0.5
PDLIM5-205ENST00000380180 FAM199XQ6PEV8 388 aaPredicted RBP18.15■□□□□ 0.5
PDLIM5-205ENST00000380180 SHFQ7M4L6 423 aa18.15■□□□□ 0.5
PDLIM5-205ENST00000380180 CPEB2Q7Z5Q1 589 aaKnown RBP18.15■□□□□ 0.5
PDLIM5-205ENST00000380180 ATG4DQ86TL0 474 aaPredicted RBP18.15■□□□□ 0.5
PDLIM5-205ENST00000380180 ELOA3Q8NG57 546 aa18.15■□□□□ 0.5
PDLIM5-205ENST00000380180 THAP3Q8WTV1 239 aaPredicted RBP18.15■□□□□ 0.5
PDLIM5-205ENST00000380180 OPALINQ96PE5 141 aa18.15■□□□□ 0.5
PDLIM5-205ENST00000380180 TAPBPLQ9BX59 468 aa18.15■□□□□ 0.5
PDLIM5-205ENST00000380180 IGKV1D-42A0A075B6H8 117 aa18.14■□□□□ 0.49
PDLIM5-205ENST00000380180 LNP1A1A4G5 178 aa18.14■□□□□ 0.49
PDLIM5-205ENST00000380180 FAM86C2PA6NEL3 165 aa18.14■□□□□ 0.49
PDLIM5-205ENST00000380180 SOCS6O14544 535 aa18.14■□□□□ 0.49
PDLIM5-205ENST00000380180 MYL12BO14950 172 aa18.14■□□□□ 0.49
PDLIM5-205ENST00000380180 GMFGO60234 142 aa18.14■□□□□ 0.49
PDLIM5-205ENST00000380180 PNMTP11086 282 aa18.14■□□□□ 0.49
PDLIM5-205ENST00000380180 CLK1P49759 484 aaKnown RBP18.14■□□□□ 0.49
PDLIM5-205ENST00000380180 MC2RQ01718 297 aa18.14■□□□□ 0.49
PDLIM5-205ENST00000380180 C3orf38Q5JPI3 329 aa18.14■□□□□ 0.49
PDLIM5-205ENST00000380180 ZNF563Q8TA94 476 aa18.14■□□□□ 0.49
PDLIM5-205ENST00000380180 C8orf44Q96CB5 159 aa18.14■□□□□ 0.49
PDLIM5-205ENST00000380180 CCNL2Q96S94 520 aaPredicted RBP18.14■□□□□ 0.49
PDLIM5-205ENST00000380180 LPAR4Q99677 370 aa18.14■□□□□ 0.49
PDLIM5-205ENST00000380180 OR51E2Q9H255 320 aa18.14■□□□□ 0.49
PDLIM5-205ENST00000380180 FN3KQ9H479 309 aa18.14■□□□□ 0.49
PDLIM5-205ENST00000380180 MED20Q9H944 212 aa18.14■□□□□ 0.49
PDLIM5-205ENST00000380180 CMC2Q9NRP2 79 aa18.14■□□□□ 0.49
PDLIM5-205ENST00000380180 NPFFR2Q9Y5X5 522 aa18.14■□□□□ 0.49
PDLIM5-205ENST00000380180 GPR179Q6PRD1 2367 aa18.14■□□□□ 0.49
PDLIM5-205ENST00000380180 CCRL2O00421 344 aa18.13■□□□□ 0.49
PDLIM5-205ENST00000380180 PPM1BO75688 479 aa18.13■□□□□ 0.49
PDLIM5-205ENST00000380180 PPP1R3DO95685 299 aa18.13■□□□□ 0.49
PDLIM5-205ENST00000380180 SCG5P05408 212 aa18.13■□□□□ 0.49
PDLIM5-205ENST00000380180 MYL12AP19105 171 aa18.13■□□□□ 0.49
PDLIM5-205ENST00000380180 HTR1FP30939 366 aa18.13■□□□□ 0.49
PDLIM5-205ENST00000380180 NRG3P56975 720 aa18.13■□□□□ 0.49
PDLIM5-205ENST00000380180 ZNF362Q5T0B9 420 aaPredicted RBP18.13■□□□□ 0.49
PDLIM5-205ENST00000380180 FCRLBQ6BAA4 426 aa18.13■□□□□ 0.49
PDLIM5-205ENST00000380180 TMEM205Q6UW68 189 aa18.13■□□□□ 0.49
PDLIM5-205ENST00000380180 PMEPA1Q969W9 287 aa18.13■□□□□ 0.49
PDLIM5-205ENST00000380180 NACC2Q96BF6 587 aa18.13■□□□□ 0.49
PDLIM5-205ENST00000380180 VMP1Q96GC9 406 aa18.13■□□□□ 0.49
PDLIM5-205ENST00000380180 LOXL4Q96JB6 756 aa18.13■□□□□ 0.49
PDLIM5-205ENST00000380180 SLC19A3Q9BZV2 496 aa18.13■□□□□ 0.49
PDLIM5-205ENST00000380180 FBXO8Q9NRD0 319 aa18.13■□□□□ 0.49
PDLIM5-205ENST00000380180 PCDHGB2Q9Y5G2 931 aa18.13■□□□□ 0.49
PDLIM5-205ENST00000380180 OR6C70A6NIJ9 312 aa18.13■□□□□ 0.49
PDLIM5-205ENST00000380180 FADS1O60427 444 aa18.13■□□□□ 0.49
PDLIM5-205ENST00000380180 ZNF354AO60765 605 aaPredicted RBP18.13■□□□□ 0.49
PDLIM5-205ENST00000380180 CLPXO76031 633 aa18.13■□□□□ 0.49
PDLIM5-205ENST00000380180 SLC6A6P31641 620 aa18.13■□□□□ 0.49
PDLIM5-205ENST00000380180 SSX1Q16384 188 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms