RNA–Protein interactions for RNA: ENST00000380097.7

TRIM6-202, Transcript of tripartite motif containing 6, humanhuman

TSL 1 (best) BASIC

Gene TRIM6, Length 3,403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-202ENST00000380097 EXOSC3Q9NQT5 275 aaKnown RBP6.78□□□□□ -1.32
TRIM6-202ENST00000380097 TDP1Q9NUW8 608 aa6.78□□□□□ -1.32
TRIM6-202ENST00000380097 DYRK1BQ9Y463 629 aa6.78□□□□□ -1.32
TRIM6-202ENST00000380097 A0A087WUU8 490 aa6.78□□□□□ -1.32
TRIM6-202ENST00000380097 POM121BA6NF01 834 aa6.78□□□□□ -1.32
TRIM6-202ENST00000380097 CPSF4LA6NMK7 179 aaKnown RBP6.78□□□□□ -1.32
TRIM6-202ENST00000380097 E9PI62 339 aa6.78□□□□□ -1.32
TRIM6-202ENST00000380097 F5H0A9 414 aaPredicted RBP6.78□□□□□ -1.32
TRIM6-202ENST00000380097 SLC16A5O15375 505 aa6.78□□□□□ -1.32
TRIM6-202ENST00000380097 AKR7A3O95154 331 aa6.78□□□□□ -1.32
TRIM6-202ENST00000380097 SLC2A10O95528 541 aa6.78□□□□□ -1.32
TRIM6-202ENST00000380097 F11P03951 625 aa6.78□□□□□ -1.32
TRIM6-202ENST00000380097 HEXBP07686 556 aa6.78□□□□□ -1.32
TRIM6-202ENST00000380097 MPC1LP0DKB6 136 aa6.78□□□□□ -1.32
TRIM6-202ENST00000380097 EPXP11678 715 aa6.78□□□□□ -1.32
TRIM6-202ENST00000380097 ZNF14P17017 642 aaPredicted RBP6.78□□□□□ -1.32
TRIM6-202ENST00000380097 GPR4P46093 362 aa6.78□□□□□ -1.32
TRIM6-202ENST00000380097 GCGRP47871 477 aa6.78□□□□□ -1.32
TRIM6-202ENST00000380097 E2F1Q01094 437 aa6.78□□□□□ -1.32
TRIM6-202ENST00000380097 RING1Q06587 406 aa6.78□□□□□ -1.32
TRIM6-202ENST00000380097 RAB33AQ14088 237 aa6.78□□□□□ -1.32
TRIM6-202ENST00000380097 SLBPQ14493 270 aaKnown RBP eCLIP6.78□□□□□ -1.32
TRIM6-202ENST00000380097 ZNF234Q14588 700 aa6.78□□□□□ -1.32
TRIM6-202ENST00000380097 SSX2Q16385 188 aa6.78□□□□□ -1.32
TRIM6-202ENST00000380097 MICBQ29980 383 aa6.78□□□□□ -1.32
TRIM6-202ENST00000380097 RNF212Q495C1 297 aa6.78□□□□□ -1.32
TRIM6-202ENST00000380097 KLHL26Q53HC5 615 aa6.78□□□□□ -1.32
TRIM6-202ENST00000380097 TMEM255AQ5JRV8 349 aa6.78□□□□□ -1.32
TRIM6-202ENST00000380097 UBE2NLQ5JXB2 153 aa6.78□□□□□ -1.32
TRIM6-202ENST00000380097 LHX8Q68G74 356 aa6.78□□□□□ -1.32
TRIM6-202ENST00000380097 RPTNQ6XPR3 784 aa6.78□□□□□ -1.32
TRIM6-202ENST00000380097 OR2AK2Q8NG84 335 aa6.78□□□□□ -1.32
TRIM6-202ENST00000380097 GHSRQ92847 366 aa6.78□□□□□ -1.32
TRIM6-202ENST00000380097 TMEM159Q96B96 161 aa6.78□□□□□ -1.32
TRIM6-202ENST00000380097 C4orf36Q96KX1 117 aa6.78□□□□□ -1.32
TRIM6-202ENST00000380097 CNTNAP3BQ96NU0 1288 aa6.78□□□□□ -1.32
TRIM6-202ENST00000380097 WDR77Q9BQA1 342 aaPredicted RBP6.78□□□□□ -1.32
TRIM6-202ENST00000380097 PAPOLGQ9BWT3 736 aaKnown RBP6.78□□□□□ -1.32
TRIM6-202ENST00000380097 GPR62Q9BZJ7 368 aa6.78□□□□□ -1.32
TRIM6-202ENST00000380097 UFSP2Q9NUQ7 469 aa6.78□□□□□ -1.32
TRIM6-202ENST00000380097 EPHA6Q9UF33 1036 aa6.78□□□□□ -1.32
TRIM6-202ENST00000380097 ACAD8Q9UKU7 415 aa6.78□□□□□ -1.32
TRIM6-202ENST00000380097 ENTPD4Q9Y227 616 aa6.78□□□□□ -1.32
TRIM6-202ENST00000380097 ASF1AQ9Y294 204 aa6.78□□□□□ -1.32
TRIM6-202ENST00000380097 PCDHGA5Q9Y5G8 931 aa6.78□□□□□ -1.32
TRIM6-202ENST00000380097 PLXNB2O15031 1838 aa6.77□□□□□ -1.33
TRIM6-202ENST00000380097 C2orf74A8MZ97 194 aa6.77□□□□□ -1.33
TRIM6-202ENST00000380097 PYCARD-AS1I3L0S3 204 aa6.77□□□□□ -1.33
TRIM6-202ENST00000380097 GAPDHSO14556 408 aaPredicted RBP6.77□□□□□ -1.33
TRIM6-202ENST00000380097 SURF4O15260 269 aa6.77□□□□□ -1.33
TRIM6-202ENST00000380097 RAD1O60671 282 aa6.77□□□□□ -1.33
TRIM6-202ENST00000380097 IGHA1P01876 353 aa6.77□□□□□ -1.33
TRIM6-202ENST00000380097 APEHP13798 732 aaKnown RBP6.77□□□□□ -1.33
TRIM6-202ENST00000380097 RPA2P15927 270 aa6.77□□□□□ -1.33
TRIM6-202ENST00000380097 BMP7P18075 431 aa6.77□□□□□ -1.33
TRIM6-202ENST00000380097 PTNP21246 168 aa6.77□□□□□ -1.33
TRIM6-202ENST00000380097 MST1P26927 711 aa6.77□□□□□ -1.33
TRIM6-202ENST00000380097 DCTDP32321 178 aa6.77□□□□□ -1.33
TRIM6-202ENST00000380097 CSF2RBP32927 897 aa6.77□□□□□ -1.33
TRIM6-202ENST00000380097 ATP5C1P36542 298 aaKnown RBP6.77□□□□□ -1.33
TRIM6-202ENST00000380097 HCCSP53701 268 aa6.77□□□□□ -1.33
TRIM6-202ENST00000380097 H2BFSP57053 126 aa6.77□□□□□ -1.33
TRIM6-202ENST00000380097 EFNB1P98172 346 aa6.77□□□□□ -1.33
TRIM6-202ENST00000380097 CCINQ13939 588 aa6.77□□□□□ -1.33
TRIM6-202ENST00000380097 RBMS2Q15434 407 aaKnown RBP6.77□□□□□ -1.33
TRIM6-202ENST00000380097 TAF13Q15543 124 aa6.77□□□□□ -1.33
TRIM6-202ENST00000380097 PGGHGQ32M88 737 aa6.77□□□□□ -1.33
TRIM6-202ENST00000380097 C9orf152Q5JTZ5 239 aa6.77□□□□□ -1.33
TRIM6-202ENST00000380097 ARMC10Q8N2F6 343 aa6.77□□□□□ -1.33
TRIM6-202ENST00000380097 GTPBP8Q8N3Z3 284 aaPredicted RBP6.77□□□□□ -1.33
TRIM6-202ENST00000380097 OR52L1Q8NGH7 329 aa6.77□□□□□ -1.33
TRIM6-202ENST00000380097 OR1S2Q8NGQ3 325 aa6.77□□□□□ -1.33
TRIM6-202ENST00000380097 OR13C5Q8NGS8 318 aa6.77□□□□□ -1.33
TRIM6-202ENST00000380097 BBS10Q8TAM1 723 aa6.77□□□□□ -1.33
TRIM6-202ENST00000380097 PHOSPHO1Q8TCT1 267 aa6.77□□□□□ -1.33
TRIM6-202ENST00000380097 TCTEX1D2Q8WW35 142 aa6.77□□□□□ -1.33
TRIM6-202ENST00000380097 CAMK1GQ96NX5 476 aa6.77□□□□□ -1.33
TRIM6-202ENST00000380097 TTTY10Q9BZA0 68 aa6.77□□□□□ -1.33
TRIM6-202ENST00000380097 XKR8Q9H6D3 395 aa6.77□□□□□ -1.33
TRIM6-202ENST00000380097 HINT3Q9NQE9 182 aaKnown RBP6.77□□□□□ -1.33
TRIM6-202ENST00000380097 EXOGQ9Y2C4 368 aaKnown RBP6.77□□□□□ -1.33
TRIM6-202ENST00000380097 PLXNA1Q9UIW2 1896 aa6.77□□□□□ -1.33
TRIM6-202ENST00000380097 ZC3H12DA2A288 527 aaKnown RBP6.77□□□□□ -1.33
TRIM6-202ENST00000380097 CTDSPLO15194 276 aa6.77□□□□□ -1.33
TRIM6-202ENST00000380097 SMAD9O15198 467 aaKnown RBP6.77□□□□□ -1.33
TRIM6-202ENST00000380097 ZNF821O75541 412 aaPredicted RBP6.77□□□□□ -1.33
TRIM6-202ENST00000380097 POP7O75817 140 aaKnown RBP6.77□□□□□ -1.33
TRIM6-202ENST00000380097 KLHL18O94889 574 aa6.77□□□□□ -1.33
TRIM6-202ENST00000380097 NDUFB6O95139 128 aa6.77□□□□□ -1.33
TRIM6-202ENST00000380097 F12P00748 615 aaPredicted RBP6.77□□□□□ -1.33
TRIM6-202ENST00000380097 FPR3P25089 353 aa6.77□□□□□ -1.33
TRIM6-202ENST00000380097 CTNNB1P35222 781 aa6.77□□□□□ -1.33
TRIM6-202ENST00000380097 AP1S1P61966 158 aa6.77□□□□□ -1.33
TRIM6-202ENST00000380097 ARF5P84085 180 aa6.77□□□□□ -1.33
TRIM6-202ENST00000380097 ST3GAL3Q11203 375 aa6.77□□□□□ -1.33
TRIM6-202ENST00000380097 ZNF311Q5JNZ3 666 aa6.77□□□□□ -1.33
TRIM6-202ENST00000380097 FAM109BQ6ICB4 259 aaPredicted RBP6.77□□□□□ -1.33
TRIM6-202ENST00000380097 TMEM71Q6P5X7 295 aa6.77□□□□□ -1.33
TRIM6-202ENST00000380097 TPGS1Q6ZTW0 290 aa6.77□□□□□ -1.33
TRIM6-202ENST00000380097 USP53Q70EK8 1073 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms