RNA–Protein interactions for RNA: ENST00000377011.6

VRK3-202, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,749 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-202ENST00000377011 GSTM3P21266 225 aa11.38□□□□□ -0.59
VRK3-202ENST00000377011 PSMA1P25786 263 aaKnown RBP11.38□□□□□ -0.59
VRK3-202ENST00000377011 CCT3P49368 545 aaKnown RBP11.38□□□□□ -0.59
VRK3-202ENST00000377011 STXBP1P61764 594 aaKnown RBP11.38□□□□□ -0.59
VRK3-202ENST00000377011 ID2Q02363 134 aa11.38□□□□□ -0.59
VRK3-202ENST00000377011 SLC13A2Q13183 592 aa11.38□□□□□ -0.59
VRK3-202ENST00000377011 SPHARQ15513 63 aa11.38□□□□□ -0.59
VRK3-202ENST00000377011 RPS26P11Q5JNZ5 115 aaPredicted RBP11.38□□□□□ -0.59
VRK3-202ENST00000377011 TNFAIP8L2Q6P589 184 aaPredicted RBP11.38□□□□□ -0.59
VRK3-202ENST00000377011 BHLHB9Q6PI77 547 aa11.38□□□□□ -0.59
VRK3-202ENST00000377011 NANOGP1Q8N7R0 232 aa11.38□□□□□ -0.59
VRK3-202ENST00000377011 HTRA1Q92743 480 aa11.38□□□□□ -0.59
VRK3-202ENST00000377011 SLC35G5Q96KT7 338 aa11.38□□□□□ -0.59
VRK3-202ENST00000377011 CEP19Q96LK0 163 aa11.38□□□□□ -0.59
VRK3-202ENST00000377011 OR1F2PQ96R84 312 aa11.38□□□□□ -0.59
VRK3-202ENST00000377011 FAIM2Q9BWQ8 316 aa11.38□□□□□ -0.59
VRK3-202ENST00000377011 SMURF1Q9HCE7 757 aa11.38□□□□□ -0.59
VRK3-202ENST00000377011 HHATLQ9HCP6 504 aa11.38□□□□□ -0.59
VRK3-202ENST00000377011 ISYNA1Q9NPH2 558 aa11.38□□□□□ -0.59
VRK3-202ENST00000377011 POLE4Q9NR33 117 aa11.38□□□□□ -0.59
VRK3-202ENST00000377011 SEC14L3Q9UDX4 400 aa11.38□□□□□ -0.59
VRK3-202ENST00000377011 STUB1Q9UNE7 303 aa11.38□□□□□ -0.59
VRK3-202ENST00000377011 DIMT1Q9UNQ2 313 aaKnown RBP11.38□□□□□ -0.59
VRK3-202ENST00000377011 FLNBO75369 2602 aaKnown RBP11.37□□□□□ -0.59
VRK3-202ENST00000377011 A0A0A6YYD5 115 aa11.37□□□□□ -0.59
VRK3-202ENST00000377011 IQCMA0A1B0GVH7 501 aa11.37□□□□□ -0.59
VRK3-202ENST00000377011 A0A1W2PS29 197 aa11.37□□□□□ -0.59
VRK3-202ENST00000377011 ZNF670-ZNF695F2Z2N8 137 aa11.37□□□□□ -0.59
VRK3-202ENST00000377011 RGS13O14921 159 aa11.37□□□□□ -0.59
VRK3-202ENST00000377011 GPX5O75715 221 aa11.37□□□□□ -0.59
VRK3-202ENST00000377011 LGI1O95970 557 aa11.37□□□□□ -0.59
VRK3-202ENST00000377011 FUT4P22083 530 aa11.37□□□□□ -0.59
VRK3-202ENST00000377011 ATP5A1P25705 553 aaKnown RBP11.37□□□□□ -0.59
VRK3-202ENST00000377011 CASP3P42574 277 aa11.37□□□□□ -0.59
VRK3-202ENST00000377011 CRISP3P54108 245 aa11.37□□□□□ -0.59
VRK3-202ENST00000377011 ZNF91Q05481 1191 aa11.37□□□□□ -0.59
VRK3-202ENST00000377011 SEC23BQ15437 767 aa11.37□□□□□ -0.59
VRK3-202ENST00000377011 CYP27C1Q4G0S4 372 aa11.37□□□□□ -0.59
VRK3-202ENST00000377011 ZNF544Q6NX49 715 aa11.37□□□□□ -0.59
VRK3-202ENST00000377011 PAPD4Q6PIY7 484 aaKnown RBP11.37□□□□□ -0.59
VRK3-202ENST00000377011 IGFL2Q6UWQ7 119 aa11.37□□□□□ -0.59
VRK3-202ENST00000377011 MMP21Q8N119 569 aa11.37□□□□□ -0.59
VRK3-202ENST00000377011 ACOT4Q8N9L9 421 aa11.37□□□□□ -0.59
VRK3-202ENST00000377011 MRPS18AQ9NVS2 196 aaKnown RBP11.37□□□□□ -0.59
VRK3-202ENST00000377011 RHCGQ9UBD6 479 aa11.37□□□□□ -0.59
VRK3-202ENST00000377011 DAPP1Q9UN19 280 aa11.37□□□□□ -0.59
VRK3-202ENST00000377011 HECTD1Q9ULT8 2610 aa11.37□□□□□ -0.59
VRK3-202ENST00000377011 SVILO95425 2214 aa11.36□□□□□ -0.59
VRK3-202ENST00000377011 NUP214P35658 2090 aaPredicted RBP11.36□□□□□ -0.59
VRK3-202ENST00000377011 TCRBV16S1A1N1A0A5B0 115 aa11.36□□□□□ -0.59
VRK3-202ENST00000377011 SNTNA6NMZ2 147 aa11.36□□□□□ -0.59
VRK3-202ENST00000377011 M0R129 80 aa11.36□□□□□ -0.59
VRK3-202ENST00000377011 TMPRSS11DO60235 418 aa11.36□□□□□ -0.59
VRK3-202ENST00000377011 LDB3O75112 727 aa11.36□□□□□ -0.59
VRK3-202ENST00000377011 GUCY1B2O75343 617 aa11.36□□□□□ -0.59
VRK3-202ENST00000377011 WISP2O76076 250 aa11.36□□□□□ -0.59
VRK3-202ENST00000377011 SERPINA7P05543 415 aa11.36□□□□□ -0.59
VRK3-202ENST00000377011 RNH1P13489 461 aaKnown RBP11.36□□□□□ -0.59
VRK3-202ENST00000377011 POU1F1P28069 291 aa11.36□□□□□ -0.59
VRK3-202ENST00000377011 NTSP30990 170 aa11.36□□□□□ -0.59
VRK3-202ENST00000377011 UQCRFS1P47985 274 aa11.36□□□□□ -0.59
VRK3-202ENST00000377011 RORCP51449 518 aa11.36□□□□□ -0.59
VRK3-202ENST00000377011 RAB38P57729 211 aa11.36□□□□□ -0.59
VRK3-202ENST00000377011 KLHL22Q53GT1 634 aa11.36□□□□□ -0.59
VRK3-202ENST00000377011 ENTPD8Q5MY95 495 aa11.36□□□□□ -0.59
VRK3-202ENST00000377011 AGAP6Q5VW22 663 aa11.36□□□□□ -0.59
VRK3-202ENST00000377011 C18orf63Q68DL7 685 aa11.36□□□□□ -0.59
VRK3-202ENST00000377011 DESI1Q6ICB0 168 aa11.36□□□□□ -0.59
VRK3-202ENST00000377011 OR4C11Q6IEV9 310 aa11.36□□□□□ -0.59
VRK3-202ENST00000377011 CCBE1Q6UXH8 406 aaPredicted RBP11.36□□□□□ -0.59
VRK3-202ENST00000377011 DGAT2L6Q6ZPD8 337 aa11.36□□□□□ -0.59
VRK3-202ENST00000377011 GDPD3Q7L5L3 318 aa11.36□□□□□ -0.59
VRK3-202ENST00000377011 OR4N5Q8IXE1 308 aa11.36□□□□□ -0.59
VRK3-202ENST00000377011 ZNF321PQ8N8H1 164 aa11.36□□□□□ -0.59
VRK3-202ENST00000377011 FAM83FQ8NEG4 500 aaPredicted RBP11.36□□□□□ -0.59
VRK3-202ENST00000377011 NFAM1Q8NET5 270 aaPredicted RBP11.36□□□□□ -0.59
VRK3-202ENST00000377011 SUN3Q8TAQ9 357 aa11.36□□□□□ -0.59
VRK3-202ENST00000377011 METTL21AQ8WXB1 218 aa11.36□□□□□ -0.59
VRK3-202ENST00000377011 PRRC1Q96M27 445 aa11.36□□□□□ -0.59
VRK3-202ENST00000377011 AGAP4Q96P64 663 aa11.36□□□□□ -0.59
VRK3-202ENST00000377011 TREX2Q9BQ50 279 aaPredicted RBP11.36□□□□□ -0.59
VRK3-202ENST00000377011 TSSK6Q9BXA6 273 aa11.36□□□□□ -0.59
VRK3-202ENST00000377011 ASPNQ9BXN1 380 aa11.36□□□□□ -0.59
VRK3-202ENST00000377011 ZNF223Q9UK11 482 aaPredicted RBP11.36□□□□□ -0.59
VRK3-202ENST00000377011 FBXW2Q9UKT8 454 aa11.36□□□□□ -0.59
VRK3-202ENST00000377011 A4GNTQ9UNA3 340 aa11.36□□□□□ -0.59
VRK3-202ENST00000377011 ASH1LQ9NR48 2969 aaKnown RBP11.36□□□□□ -0.59
VRK3-202ENST00000377011 URADA6NGE7 173 aa11.35□□□□□ -0.59
VRK3-202ENST00000377011 H3BN98 237 aa11.35□□□□□ -0.59
VRK3-202ENST00000377011 J3QKU1 62 aa11.35□□□□□ -0.59
VRK3-202ENST00000377011 SYT5O00445 386 aa11.35□□□□□ -0.59
VRK3-202ENST00000377011 MYL12BO14950 172 aa11.35□□□□□ -0.59
VRK3-202ENST00000377011 B3GALT2O43825 422 aa11.35□□□□□ -0.59
VRK3-202ENST00000377011 PRKNO60260 465 aaPredicted RBP11.35□□□□□ -0.59
VRK3-202ENST00000377011 TPST2O60704 377 aa11.35□□□□□ -0.59
VRK3-202ENST00000377011 SEMA7AO75326 666 aa11.35□□□□□ -0.59
VRK3-202ENST00000377011 NME6O75414 186 aaPredicted RBP11.35□□□□□ -0.59
VRK3-202ENST00000377011 RAB36O95755 333 aa11.35□□□□□ -0.59
VRK3-202ENST00000377011 IL1AP01583 271 aa11.35□□□□□ -0.59
VRK3-202ENST00000377011 TP53P04637 393 aaPredicted RBP11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms