RNA–Protein interactions for RNA: ENST00000375427.4

SCN2A-202, Transcript of sodium voltage-gated channel alpha subunit 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN2A, Length 8,553 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2A-202ENST00000375427 ADIGQ0VDE8 80 aa5.62□□□□□ -1.51
SCN2A-202ENST00000375427 C17orf64Q86WR6 236 aa5.62□□□□□ -1.51
SCN2A-202ENST00000375427 OR5AS1Q8N127 324 aa5.62□□□□□ -1.51
SCN2A-202ENST00000375427 CISD2Q8N5K1 135 aaKnown RBP5.62□□□□□ -1.51
SCN2A-202ENST00000375427 TMEM251Q8N6I4 163 aa5.62□□□□□ -1.51
SCN2A-202ENST00000375427 TBC1D20Q96BZ9 403 aa5.62□□□□□ -1.51
SCN2A-202ENST00000375427 SHDQ96IW2 340 aa5.62□□□□□ -1.51
SCN2A-202ENST00000375427 C19orf43Q9BQ61 176 aa5.62□□□□□ -1.51
SCN2A-202ENST00000375427 KCNH6Q9H252 994 aa5.62□□□□□ -1.51
SCN2A-202ENST00000375427 UBQLN3Q9H347 655 aa5.62□□□□□ -1.51
SCN2A-202ENST00000375427 WDR27A2RRH5 827 aa5.62□□□□□ -1.51
SCN2A-202ENST00000375427 PEX12O00623 359 aa5.62□□□□□ -1.51
SCN2A-202ENST00000375427 SLC16A6O15403 523 aa5.62□□□□□ -1.51
SCN2A-202ENST00000375427 FZD7O75084 574 aa5.62□□□□□ -1.51
SCN2A-202ENST00000375427 GSRP00390 522 aa5.62□□□□□ -1.51
SCN2A-202ENST00000375427 GGT1P19440 569 aa5.62□□□□□ -1.51
SCN2A-202ENST00000375427 ADORA2AP29274 412 aa5.62□□□□□ -1.51
SCN2A-202ENST00000375427 THPOP40225 353 aa5.62□□□□□ -1.51
SCN2A-202ENST00000375427 TNFSF9P41273 254 aa5.62□□□□□ -1.51
SCN2A-202ENST00000375427 GABRA6Q16445 453 aa5.62□□□□□ -1.51
SCN2A-202ENST00000375427 GOLGA7BQ2TAP0 167 aa5.62□□□□□ -1.51
SCN2A-202ENST00000375427 LCN10Q6JVE6 187 aa5.62□□□□□ -1.51
SCN2A-202ENST00000375427 NOXRED1Q6NXP6 359 aa5.62□□□□□ -1.51
SCN2A-202ENST00000375427 PARP16Q8N5Y8 322 aa5.62□□□□□ -1.51
SCN2A-202ENST00000375427 OR6S1Q8NH40 331 aa5.62□□□□□ -1.51
SCN2A-202ENST00000375427 SEMA4GQ9NTN9 838 aa5.62□□□□□ -1.51
SCN2A-202ENST00000375427 EIF2AK4Q9P2K8 1649 aaKnown RBP5.62□□□□□ -1.51
SCN2A-202ENST00000375427 TRBV11-1A0A0K0K1C0 115 aa5.62□□□□□ -1.51
SCN2A-202ENST00000375427 GAPDHSO14556 408 aaPredicted RBP5.62□□□□□ -1.51
SCN2A-202ENST00000375427 NOBOXO60393 691 aa5.62□□□□□ -1.51
SCN2A-202ENST00000375427 CD1EP15812 388 aa5.62□□□□□ -1.51
SCN2A-202ENST00000375427 CSNK1DP48730 415 aa5.62□□□□□ -1.51
SCN2A-202ENST00000375427 CSNK1EP49674 416 aaKnown RBP5.62□□□□□ -1.51
SCN2A-202ENST00000375427 SUB1P53999 127 aaKnown RBP eCLIP5.62□□□□□ -1.51
SCN2A-202ENST00000375427 TNFRSF17Q02223 184 aa5.62□□□□□ -1.51
SCN2A-202ENST00000375427 LSAMPQ13449 338 aa5.62□□□□□ -1.51
SCN2A-202ENST00000375427 SF3A2Q15428 464 aaKnown RBP5.62□□□□□ -1.51
SCN2A-202ENST00000375427 DUOXA1Q1HG43 343 aa5.62□□□□□ -1.51
SCN2A-202ENST00000375427 OR2B11Q5JQS5 317 aa5.62□□□□□ -1.51
SCN2A-202ENST00000375427 DUPD1Q68J44 220 aa5.62□□□□□ -1.51
SCN2A-202ENST00000375427 BPHLQ86WA6 291 aaPredicted RBP5.62□□□□□ -1.51
SCN2A-202ENST00000375427 OR1J2Q8NGS2 313 aa5.62□□□□□ -1.51
SCN2A-202ENST00000375427 PAM16Q9Y3D7 125 aa5.62□□□□□ -1.51
SCN2A-202ENST00000375427 HACD1B0YJ81 288 aa5.62□□□□□ -1.51
SCN2A-202ENST00000375427 AVPR1BP47901 424 aa5.62□□□□□ -1.51
SCN2A-202ENST00000375427 SNRPNP63162 240 aaKnown RBP5.62□□□□□ -1.51
SCN2A-202ENST00000375427 ERV3-1Q14264 604 aa5.62□□□□□ -1.51
SCN2A-202ENST00000375427 C16orf46Q6P387 395 aa5.62□□□□□ -1.51
SCN2A-202ENST00000375427 ZNF583Q96ND8 569 aa5.62□□□□□ -1.51
SCN2A-202ENST00000375427 C20orf24Q9BUV8 137 aa5.62□□□□□ -1.51
SCN2A-202ENST00000375427 SEC11CQ9BY50 192 aa5.62□□□□□ -1.51
SCN2A-202ENST00000375427 ADAP2Q9NPF8 381 aa5.62□□□□□ -1.51
SCN2A-202ENST00000375427 PTRH2Q9Y3E5 179 aaKnown RBP5.62□□□□□ -1.51
SCN2A-202ENST00000375427 TRAPPC1Q9Y5R8 145 aa5.62□□□□□ -1.51
SCN2A-202ENST00000375427 LOC389332A0A1B0GUA5 103 aa5.62□□□□□ -1.51
SCN2A-202ENST00000375427 UBE2L5PA0A1B0GUS4 154 aa5.62□□□□□ -1.51
SCN2A-202ENST00000375427 SPATA31C2B4DYI2 1134 aa5.62□□□□□ -1.51
SCN2A-202ENST00000375427 EIF4E2O60573 245 aaKnown RBP5.62□□□□□ -1.51
SCN2A-202ENST00000375427 SRPX2O60687 465 aaPredicted RBP5.62□□□□□ -1.51
SCN2A-202ENST00000375427 AGXTP21549 392 aa5.62□□□□□ -1.51
SCN2A-202ENST00000375427 ABCD3P28288 659 aa5.62□□□□□ -1.51
SCN2A-202ENST00000375427 CRHR1P34998 444 aa5.62□□□□□ -1.51
SCN2A-202ENST00000375427 TAS2R19P59542 299 aa5.62□□□□□ -1.51
SCN2A-202ENST00000375427 SLC14A2Q15849 920 aa5.62□□□□□ -1.51
SCN2A-202ENST00000375427 Q71RC1 249 aaPredicted RBP5.62□□□□□ -1.51
SCN2A-202ENST00000375427 ASRGL1Q7L266 308 aa5.62□□□□□ -1.51
SCN2A-202ENST00000375427 TMEM150AQ86TG1 271 aa5.62□□□□□ -1.51
SCN2A-202ENST00000375427 ANKLE1Q8NAG6 615 aa5.62□□□□□ -1.51
SCN2A-202ENST00000375427 GPRC5AQ8NFJ5 357 aa5.62□□□□□ -1.51
SCN2A-202ENST00000375427 OR4K13Q8NH42 304 aa5.62□□□□□ -1.51
SCN2A-202ENST00000375427 SFT2D1Q8WV19 159 aa5.62□□□□□ -1.51
SCN2A-202ENST00000375427 TVP23CQ96ET8 276 aa5.62□□□□□ -1.51
SCN2A-202ENST00000375427 WDR89Q96FK6 387 aaPredicted RBP5.62□□□□□ -1.51
SCN2A-202ENST00000375427 CPB2Q96IY4 423 aa5.62□□□□□ -1.51
SCN2A-202ENST00000375427 APOLD1Q96LR9 279 aa5.62□□□□□ -1.51
SCN2A-202ENST00000375427 NUDT22Q9BRQ3 303 aa5.62□□□□□ -1.51
SCN2A-202ENST00000375427 SGK2Q9HBY8 427 aa5.62□□□□□ -1.51
SCN2A-202ENST00000375427 MED9Q9NWA0 146 aa5.62□□□□□ -1.51
SCN2A-202ENST00000375427 TRAPPC2LQ9UL33 140 aa5.62□□□□□ -1.51
SCN2A-202ENST00000375427 RCL1Q9Y2P8 373 aaKnown RBP5.62□□□□□ -1.51
SCN2A-202ENST00000375427 KCNU1A8MYU2 1149 aa5.61□□□□□ -1.51
SCN2A-202ENST00000375427 BCHEP06276 602 aa5.61□□□□□ -1.51
SCN2A-202ENST00000375427 CRISP3P54108 245 aa5.61□□□□□ -1.51
SCN2A-202ENST00000375427 SRYQ05066 204 aa5.61□□□□□ -1.51
SCN2A-202ENST00000375427 MGAT2Q10469 447 aa5.61□□□□□ -1.51
SCN2A-202ENST00000375427 ILKQ13418 452 aa5.61□□□□□ -1.51
SCN2A-202ENST00000375427 CUZD1Q86UP6 607 aa5.61□□□□□ -1.51
SCN2A-202ENST00000375427 CNTN4Q8IWV2 1026 aa5.61□□□□□ -1.51
SCN2A-202ENST00000375427 HS3ST5Q8IZT8 346 aa5.61□□□□□ -1.51
SCN2A-202ENST00000375427 NLGN4YQ8NFZ3 816 aaPredicted RBP5.61□□□□□ -1.51
SCN2A-202ENST00000375427 OR10P1Q8NGE3 313 aa5.61□□□□□ -1.51
SCN2A-202ENST00000375427 ASB10Q8WXI3 467 aa5.61□□□□□ -1.51
SCN2A-202ENST00000375427 PBX4Q9BYU1 374 aa5.61□□□□□ -1.51
SCN2A-202ENST00000375427 PLEKHJ1Q9NW61 149 aa5.61□□□□□ -1.51
SCN2A-202ENST00000375427 SPANXCQ9NY87 97 aa5.61□□□□□ -1.51
SCN2A-202ENST00000375427 SALL4Q9UJQ4 1053 aa5.61□□□□□ -1.51
SCN2A-202ENST00000375427 ZDHHC8Q9ULC8 765 aa5.61□□□□□ -1.51
SCN2A-202ENST00000375427 GPR34Q9UPC5 381 aa5.61□□□□□ -1.51
SCN2A-202ENST00000375427 NPC1L1Q9UHC9 1359 aa5.61□□□□□ -1.51
SCN2A-202ENST00000375427 SLX4Q8IY92 1834 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms