RNA–Protein interactions for RNA: ENST00000374685.8

RXRB-202, Transcript of retinoid X receptor beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RXRB, Length 2,846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-202ENST00000374685 RNF215Q9Y6U7 377 aa16.86■□□□□ 0.29
RXRB-202ENST00000374685 ZDBF2Q9HCK1 2354 aa16.86■□□□□ 0.29
RXRB-202ENST00000374685 HRO43593 1189 aa16.86■□□□□ 0.29
RXRB-202ENST00000374685 SRPX2O60687 465 aaPredicted RBP16.86■□□□□ 0.29
RXRB-202ENST00000374685 CTNSO60931 367 aa16.86■□□□□ 0.29
RXRB-202ENST00000374685 TSPAN9O75954 239 aa16.86■□□□□ 0.29
RXRB-202ENST00000374685 LIMS3P0CW19 117 aa16.86■□□□□ 0.29
RXRB-202ENST00000374685 LIMS4P0CW20 117 aa16.86■□□□□ 0.29
RXRB-202ENST00000374685 TRAPPC2P0DI81 140 aa16.86■□□□□ 0.29
RXRB-202ENST00000374685 TRAPPC2BP0DI82 140 aa16.86■□□□□ 0.29
RXRB-202ENST00000374685 CD1CP29017 333 aa16.86■□□□□ 0.29
RXRB-202ENST00000374685 BMP8BP34820 402 aa16.86■□□□□ 0.29
RXRB-202ENST00000374685 HTR2BP41595 481 aa16.86■□□□□ 0.29
RXRB-202ENST00000374685 RAB40BQ12829 278 aa16.86■□□□□ 0.29
RXRB-202ENST00000374685 BMP8AQ7Z5Y6 402 aa16.86■□□□□ 0.29
RXRB-202ENST00000374685 CAMKK1Q8N5S9 505 aa16.86■□□□□ 0.29
RXRB-202ENST00000374685 TSLPQ969D9 159 aa16.86■□□□□ 0.29
RXRB-202ENST00000374685 HS6ST2Q96MM7 605 aa16.86■□□□□ 0.29
RXRB-202ENST00000374685 NRSN2Q9GZP1 204 aa16.86■□□□□ 0.29
RXRB-202ENST00000374685 ANKRD19PQ9H560 264 aa16.86■□□□□ 0.29
RXRB-202ENST00000374685 CFL2Q9Y281 166 aa16.86■□□□□ 0.29
RXRB-202ENST00000374685 TEX51A0A1B0GUA7 166 aa16.85■□□□□ 0.29
RXRB-202ENST00000374685 C10orf142B7Z368 130 aa16.85■□□□□ 0.29
RXRB-202ENST00000374685 OR2B3O76000 313 aa16.85■□□□□ 0.29
RXRB-202ENST00000374685 PPP1R3DO95685 299 aa16.85■□□□□ 0.29
RXRB-202ENST00000374685 YES1P07947 543 aa16.85■□□□□ 0.29
RXRB-202ENST00000374685 MSL3P1P0C860 447 aa16.85■□□□□ 0.29
RXRB-202ENST00000374685 GAS1P54826 345 aa16.85■□□□□ 0.29
RXRB-202ENST00000374685 HNRNPKP61978 463 aaKnown RBP eCLIP16.85■□□□□ 0.299e-12■■■■■ 36.2
RXRB-202ENST00000374685 MLLT11Q13015 90 aaPredicted RBP16.85■□□□□ 0.29
RXRB-202ENST00000374685 ARHGEF39Q8N4T4 335 aa16.85■□□□□ 0.29
RXRB-202ENST00000374685 NR4A3Q92570 626 aa16.85■□□□□ 0.29
RXRB-202ENST00000374685 FGF11Q92914 225 aa16.85■□□□□ 0.29
RXRB-202ENST00000374685 TNFRSF13CQ96RJ3 184 aa16.85■□□□□ 0.29
RXRB-202ENST00000374685 CITED4Q96RK1 184 aa16.85■□□□□ 0.29
RXRB-202ENST00000374685 OR10A5Q9H207 317 aa16.85■□□□□ 0.29
RXRB-202ENST00000374685 Q9N2J8 555 aa16.85■□□□□ 0.29
RXRB-202ENST00000374685 PLCL2Q9UPR0 1127 aa16.85■□□□□ 0.29
RXRB-202ENST00000374685 C12orf71A8MTZ7 269 aa16.85■□□□□ 0.29
RXRB-202ENST00000374685 C17orf105B2RV13 164 aa16.85■□□□□ 0.29
RXRB-202ENST00000374685 NGFRP08138 427 aa16.85■□□□□ 0.29
RXRB-202ENST00000374685 RPS4Y1P22090 263 aaKnown RBP16.85■□□□□ 0.29
RXRB-202ENST00000374685 PAICSP22234 425 aaKnown RBP16.85■□□□□ 0.29
RXRB-202ENST00000374685 SLC1A3P43003 542 aa16.85■□□□□ 0.29
RXRB-202ENST00000374685 DMWDQ09019 674 aa16.85■□□□□ 0.29
RXRB-202ENST00000374685 SPANXN2Q5MJ10 180 aa16.85■□□□□ 0.29
RXRB-202ENST00000374685 OAFQ86UD1 273 aa16.85■□□□□ 0.29
RXRB-202ENST00000374685 KLBQ86Z14 1044 aa16.85■□□□□ 0.29
RXRB-202ENST00000374685 LRRC17Q8N6Y2 441 aa16.85■□□□□ 0.29
RXRB-202ENST00000374685 DMRTB1Q96MA1 342 aa16.85■□□□□ 0.29
RXRB-202ENST00000374685 VSTM2LQ96N03 204 aa16.85■□□□□ 0.29
RXRB-202ENST00000374685 TTYH2Q9BSA4 534 aa16.85■□□□□ 0.29
RXRB-202ENST00000374685 NXF2Q9GZY0 626 aaKnown RBP16.85■□□□□ 0.29
RXRB-202ENST00000374685 NDUFB11Q9NX14 153 aa16.85■□□□□ 0.29
RXRB-202ENST00000374685 SEC14L4Q9UDX3 406 aa16.85■□□□□ 0.29
RXRB-202ENST00000374685 CBLCQ9ULV8 474 aa16.85■□□□□ 0.29
RXRB-202ENST00000374685 CACNA1CQ13936 2221 aa16.84■□□□□ 0.29
RXRB-202ENST00000374685 KLF4O43474 513 aa16.84■□□□□ 0.29
RXRB-202ENST00000374685 SDC2P34741 201 aa16.84■□□□□ 0.29
RXRB-202ENST00000374685 HNRNPA0Q13151 305 aaKnown RBP16.84■□□□□ 0.29
RXRB-202ENST00000374685 SMAD2Q15796 467 aaKnown RBP16.84■□□□□ 0.29
RXRB-202ENST00000374685 AADACL4Q5VUY2 407 aa16.84■□□□□ 0.29
RXRB-202ENST00000374685 ZNF687Q8N1G0 1237 aa16.84■□□□□ 0.29
RXRB-202ENST00000374685 OR10H4Q8NGA5 316 aa16.84■□□□□ 0.29
RXRB-202ENST00000374685 RFKQ969G6 155 aa16.84■□□□□ 0.29
RXRB-202ENST00000374685 MARVELD3Q96A59 401 aa16.84■□□□□ 0.29
RXRB-202ENST00000374685 DCLRE1CQ96SD1 692 aaKnown RBP16.84■□□□□ 0.29
RXRB-202ENST00000374685 SYNDIG1Q9H7V2 258 aa16.84■□□□□ 0.29
RXRB-202ENST00000374685 ISG20L2Q9H9L3 353 aaKnown RBP16.84■□□□□ 0.29
RXRB-202ENST00000374685 TXNL4BQ9NX01 149 aaKnown RBP16.84■□□□□ 0.29
RXRB-202ENST00000374685 TNFRSF10DQ9UBN6 386 aa16.84■□□□□ 0.29
RXRB-202ENST00000374685 RPS6KB2Q9UBS0 482 aa16.84■□□□□ 0.29
RXRB-202ENST00000374685 A0A1B0GVT2 93 aa16.84■□□□□ 0.29
RXRB-202ENST00000374685 A0A1W2PQ72 361 aa16.84■□□□□ 0.29
RXRB-202ENST00000374685 GPR50Q13585 617 aa16.84■□□□□ 0.29
RXRB-202ENST00000374685 NXNL2Q5VZ03 156 aa16.84■□□□□ 0.29
RXRB-202ENST00000374685 POMZP3Q6PJE2 187 aa16.84■□□□□ 0.29
RXRB-202ENST00000374685 NOXA1Q86UR1 476 aa16.84■□□□□ 0.29
RXRB-202ENST00000374685 LAX1Q8IWV1 398 aa16.84■□□□□ 0.29
RXRB-202ENST00000374685 SPRYD4Q8WW59 207 aaPredicted RBP16.84■□□□□ 0.29
RXRB-202ENST00000374685 LDHAL6BQ9BYZ2 381 aaPredicted RBP16.84■□□□□ 0.29
RXRB-202ENST00000374685 MRPS17Q9Y2R5 130 aaKnown RBP16.84■□□□□ 0.29
RXRB-202ENST00000374685 C17orf51A8MQB3 221 aa16.83■□□□□ 0.29
RXRB-202ENST00000374685 KDM4EB2RXH2 506 aaPredicted RBP16.83■□□□□ 0.29
RXRB-202ENST00000374685 NSA2O95478 260 aaKnown RBP16.83■□□□□ 0.29
RXRB-202ENST00000374685 CSTAP01040 98 aa16.83■□□□□ 0.29
RXRB-202ENST00000374685 CT45A8P0DMV1 189 aa16.83■□□□□ 0.29
RXRB-202ENST00000374685 CT45A9P0DMV2 189 aa16.83■□□□□ 0.29
RXRB-202ENST00000374685 MAP3K8P41279 467 aa16.83■□□□□ 0.29
RXRB-202ENST00000374685 SKP1P63208 163 aa16.83■□□□□ 0.29
RXRB-202ENST00000374685 CT45A2Q5DJT8 189 aa16.83■□□□□ 0.29
RXRB-202ENST00000374685 VWA2Q5GFL6 755 aa16.83■□□□□ 0.29
RXRB-202ENST00000374685 C3orf38Q5JPI3 329 aa16.83■□□□□ 0.29
RXRB-202ENST00000374685 KIRREL2Q6UWL6 708 aa16.83■□□□□ 0.29
RXRB-202ENST00000374685 OR8H2Q8N162 312 aa16.83■□□□□ 0.29
RXRB-202ENST00000374685 HLA-CQ95604 372 aa16.83■□□□□ 0.29
RXRB-202ENST00000374685 MSANTD3Q96H12 275 aa16.83■□□□□ 0.29
RXRB-202ENST00000374685 NARFLQ9H6Q4 476 aa16.83■□□□□ 0.29
RXRB-202ENST00000374685 FSCN3Q9NQT6 498 aa16.83■□□□□ 0.29
RXRB-202ENST00000374685 DNAJB12Q9NXW2 375 aaKnown RBP16.83■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms