RNA–Protein interactions for RNA: ENST00000374426.6

CXCL12-202, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 470 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-202ENST00000374426 ZNF716A6NP11 495 aa12.14□□□□□ -0.47
CXCL12-202ENST00000374426 SULT2B1O00204 365 aa12.14□□□□□ -0.47
CXCL12-202ENST00000374426 PHF1O43189 567 aaPredicted RBP12.14□□□□□ -0.47
CXCL12-202ENST00000374426 FCMRO60667 390 aa12.14□□□□□ -0.47
CXCL12-202ENST00000374426 LYPLA1O75608 230 aaPredicted RBP12.14□□□□□ -0.47
CXCL12-202ENST00000374426 CYP7B1O75881 506 aa12.14□□□□□ -0.47
CXCL12-202ENST00000374426 PTAFRP25105 342 aa12.14□□□□□ -0.47
CXCL12-202ENST00000374426 ALDH3A1P30838 453 aa12.14□□□□□ -0.47
CXCL12-202ENST00000374426 NTF4P34130 210 aa12.14□□□□□ -0.47
CXCL12-202ENST00000374426 ZNF83P51522 516 aa12.14□□□□□ -0.47
CXCL12-202ENST00000374426 HBA1P69905 142 aa12.14□□□□□ -0.47
CXCL12-202ENST00000374426 VLDLRP98155 873 aa12.14□□□□□ -0.47
CXCL12-202ENST00000374426 LOXL1Q08397 574 aaPredicted RBP12.14□□□□□ -0.47
CXCL12-202ENST00000374426 MERTKQ12866 999 aa12.14□□□□□ -0.47
CXCL12-202ENST00000374426 PDK3Q15120 406 aa12.14□□□□□ -0.47
CXCL12-202ENST00000374426 GPR68Q15743 365 aa12.14□□□□□ -0.47
CXCL12-202ENST00000374426 ZNF141Q15928 474 aa12.14□□□□□ -0.47
CXCL12-202ENST00000374426 ELOA3BQ3SY89 546 aa12.14□□□□□ -0.47
CXCL12-202ENST00000374426 SYT14P1Q58G82 188 aa12.14□□□□□ -0.47
CXCL12-202ENST00000374426 C6orf136Q5SQH8 315 aa12.14□□□□□ -0.47
CXCL12-202ENST00000374426 IL23RQ5VWK5 629 aa12.14□□□□□ -0.47
CXCL12-202ENST00000374426 SLC22A25Q6T423 547 aa12.14□□□□□ -0.47
CXCL12-202ENST00000374426 CLEC2AQ6UVW9 174 aa12.14□□□□□ -0.47
CXCL12-202ENST00000374426 B3GLCTQ6Y288 498 aa12.14□□□□□ -0.47
CXCL12-202ENST00000374426 OLIG3Q7RTU3 272 aa12.14□□□□□ -0.47
CXCL12-202ENST00000374426 MTDHQ86UE4 582 aaKnown RBP12.14□□□□□ -0.47
CXCL12-202ENST00000374426 RIMKLAQ8IXN7 391 aa12.14□□□□□ -0.47
CXCL12-202ENST00000374426 NATD1Q8N6N6 113 aa12.14□□□□□ -0.47
CXCL12-202ENST00000374426 ZNF525Q8N782 197 aa12.14□□□□□ -0.47
CXCL12-202ENST00000374426 ELOA3Q8NG57 546 aa12.14□□□□□ -0.47
CXCL12-202ENST00000374426 OR52N5Q8NH56 324 aa12.14□□□□□ -0.47
CXCL12-202ENST00000374426 AGR3Q8TD06 166 aa12.14□□□□□ -0.47
CXCL12-202ENST00000374426 ARL8AQ96BM9 186 aa12.14□□□□□ -0.47
CXCL12-202ENST00000374426 MOAP1Q96BY2 351 aa12.14□□□□□ -0.47
CXCL12-202ENST00000374426 DHRS9Q9BPW9 319 aa12.14□□□□□ -0.47
CXCL12-202ENST00000374426 SERINC1Q9NRX5 453 aa12.14□□□□□ -0.47
CXCL12-202ENST00000374426 EMC3Q9P0I2 261 aa12.14□□□□□ -0.47
CXCL12-202ENST00000374426 CDC42EP3Q9UKI2 254 aa12.14□□□□□ -0.47
CXCL12-202ENST00000374426 MGAT4BQ9UQ53 548 aa12.14□□□□□ -0.47
CXCL12-202ENST00000374426 SLC25A15Q9Y619 301 aa12.14□□□□□ -0.47
CXCL12-202ENST00000374426 YLPM1P49750 1951 aaKnown RBP12.14□□□□□ -0.47
CXCL12-202ENST00000374426 A0A1W2PR80 420 aa12.13□□□□□ -0.47
CXCL12-202ENST00000374426 CFLARO15519 480 aa12.13□□□□□ -0.47
CXCL12-202ENST00000374426 NPHS1O60500 1241 aa12.13□□□□□ -0.47
CXCL12-202ENST00000374426 UGT2B17O75795 530 aa12.13□□□□□ -0.47
CXCL12-202ENST00000374426 SLU7O95391 586 aaKnown RBP12.13□□□□□ -0.47
CXCL12-202ENST00000374426 CSTAP01040 98 aa12.13□□□□□ -0.47
CXCL12-202ENST00000374426 UBTFL6P0CB48 400 aaPredicted RBP12.13□□□□□ -0.47
CXCL12-202ENST00000374426 DHRS4L1P0CG22 281 aa12.13□□□□□ -0.47
CXCL12-202ENST00000374426 CD40P25942 277 aa12.13□□□□□ -0.47
CXCL12-202ENST00000374426 ARRB2P32121 409 aa12.13□□□□□ -0.47
CXCL12-202ENST00000374426 DSCR9P59020 149 aa12.13□□□□□ -0.47
CXCL12-202ENST00000374426 CSNK2A1P68400 391 aaPredicted RBP12.13□□□□□ -0.47
CXCL12-202ENST00000374426 CHRNEQ04844 493 aa12.13□□□□□ -0.47
CXCL12-202ENST00000374426 ATP6AP1LQ52LC2 224 aa12.13□□□□□ -0.47
CXCL12-202ENST00000374426 HOMEZQ8IX15 550 aa12.13□□□□□ -0.47
CXCL12-202ENST00000374426 CLEC4FQ8N1N0 589 aa12.13□□□□□ -0.47
CXCL12-202ENST00000374426 UBE2J2Q8N2K1 259 aa12.13□□□□□ -0.47
CXCL12-202ENST00000374426 MUC15Q8N387 334 aa12.13□□□□□ -0.47
CXCL12-202ENST00000374426 SLC25A43Q8WUT9 341 aaPredicted RBP12.13□□□□□ -0.47
CXCL12-202ENST00000374426 APH1AQ96BI3 265 aa12.13□□□□□ -0.47
CXCL12-202ENST00000374426 PRPF18Q99633 342 aaKnown RBP12.13□□□□□ -0.47
CXCL12-202ENST00000374426 DUSP26Q9BV47 211 aa12.13□□□□□ -0.47
CXCL12-202ENST00000374426 MECRQ9BV79 373 aa12.13□□□□□ -0.47
CXCL12-202ENST00000374426 BHLHE41Q9C0J9 482 aaPredicted RBP12.13□□□□□ -0.47
CXCL12-202ENST00000374426 PPCSQ9HAB8 311 aa12.13□□□□□ -0.47
CXCL12-202ENST00000374426 ACER3Q9NUN7 267 aa12.13□□□□□ -0.47
CXCL12-202ENST00000374426 POU2F3Q9UKI9 436 aa12.13□□□□□ -0.47
CXCL12-202ENST00000374426 MKLN1Q9UL63 735 aa12.13□□□□□ -0.47
CXCL12-202ENST00000374426 CIB4A0PJX0 185 aa12.12□□□□□ -0.47
CXCL12-202ENST00000374426 CCT8L1PA6NM43 557 aa12.12□□□□□ -0.47
CXCL12-202ENST00000374426 H7C417 338 aa12.12□□□□□ -0.47
CXCL12-202ENST00000374426 BCAS1O75363 584 aaPredicted RBP12.12□□□□□ -0.47
CXCL12-202ENST00000374426 STX11O75558 287 aa12.12□□□□□ -0.47
CXCL12-202ENST00000374426 PGCP20142 388 aa12.12□□□□□ -0.47
CXCL12-202ENST00000374426 PRPS1L1P21108 318 aa12.12□□□□□ -0.47
CXCL12-202ENST00000374426 MATN1P21941 496 aa12.12□□□□□ -0.47
CXCL12-202ENST00000374426 SOAT1P35610 550 aa12.12□□□□□ -0.47
CXCL12-202ENST00000374426 FOXG1P55316 489 aaPredicted RBP12.12□□□□□ -0.47
CXCL12-202ENST00000374426 RAB35Q15286 201 aa12.12□□□□□ -0.47
CXCL12-202ENST00000374426 MAPK14Q16539 360 aa12.12□□□□□ -0.47
CXCL12-202ENST00000374426 BHLHB9Q6PI77 547 aa12.12□□□□□ -0.47
CXCL12-202ENST00000374426 KLHL17Q6TDP4 642 aa12.12□□□□□ -0.47
CXCL12-202ENST00000374426 ZCCHC23Q6ZST2 131 aa12.12□□□□□ -0.47
CXCL12-202ENST00000374426 EIF3MQ7L2H7 374 aaKnown RBP12.12□□□□□ -0.47
CXCL12-202ENST00000374426 C6orf120Q7Z4R8 191 aa12.12□□□□□ -0.47
CXCL12-202ENST00000374426 FBXL14Q8N1E6 418 aa12.12□□□□□ -0.47
CXCL12-202ENST00000374426 FNDC5Q8NAU1 212 aa12.12□□□□□ -0.47
CXCL12-202ENST00000374426 FAM71CQ8NEG0 241 aa12.12□□□□□ -0.47
CXCL12-202ENST00000374426 UBLCP1Q8WVY7 318 aaPredicted RBP12.12□□□□□ -0.47
CXCL12-202ENST00000374426 TMEM234Q8WY98 164 aa12.12□□□□□ -0.47
CXCL12-202ENST00000374426 DNAJA3Q96EY1 480 aa12.12□□□□□ -0.47
CXCL12-202ENST00000374426 ARL5BQ96KC2 179 aa12.12□□□□□ -0.47
CXCL12-202ENST00000374426 MUS81Q96NY9 551 aa12.12□□□□□ -0.47
CXCL12-202ENST00000374426 CCDC106Q9BWC9 280 aa12.12□□□□□ -0.47
CXCL12-202ENST00000374426 ZNF350Q9GZX5 532 aa12.12□□□□□ -0.47
CXCL12-202ENST00000374426 MANSC1Q9H8J5 431 aa12.12□□□□□ -0.47
CXCL12-202ENST00000374426 EML4Q9HC35 981 aaKnown RBP12.12□□□□□ -0.47
CXCL12-202ENST00000374426 CTPS2Q9NRF8 586 aa12.12□□□□□ -0.47
CXCL12-202ENST00000374426 ASB6Q9NWX5 421 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms