RNA–Protein interactions for RNA: ENST00000373327.4

TRAF3IP1-201, Transcript of TRAF3 interacting protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRAF3IP1, Length 4,279 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-201ENST00000373327 Q6ZS52 159 aa16.39■□□□□ 0.21
TRAF3IP1-201ENST00000373327 PRSS45Q7RTY3 260 aa16.39■□□□□ 0.21
TRAF3IP1-201ENST00000373327 THAP7Q9BT49 309 aaPredicted RBP16.39■□□□□ 0.21
TRAF3IP1-201ENST00000373327 GALNT9Q9HCQ5 603 aa16.39■□□□□ 0.21
TRAF3IP1-201ENST00000373327 SERPINA3P01011 423 aa16.39■□□□□ 0.21
TRAF3IP1-201ENST00000373327 MT-ND4P03905 459 aa16.39■□□□□ 0.21
TRAF3IP1-201ENST00000373327 GABRA5P31644 462 aa16.39■□□□□ 0.21
TRAF3IP1-201ENST00000373327 LRFN4Q6PJG9 635 aa16.39■□□□□ 0.21
TRAF3IP1-201ENST00000373327 KRT77Q7Z794 578 aa16.39■□□□□ 0.21
TRAF3IP1-201ENST00000373327 GCDHQ92947 438 aaPredicted RBP16.39■□□□□ 0.21
TRAF3IP1-201ENST00000373327 LMF1Q96S06 567 aa16.39■□□□□ 0.21
TRAF3IP1-201ENST00000373327 PIGUQ9H490 435 aa16.39■□□□□ 0.21
TRAF3IP1-201ENST00000373327 NFKBIL1Q9UBC1 381 aaPredicted RBP16.39■□□□□ 0.21
TRAF3IP1-201ENST00000373327 CENPVL1A0A0U1RR11 272 aa16.39■□□□□ 0.21
TRAF3IP1-201ENST00000373327 A0A1W2PPV9 198 aa16.39■□□□□ 0.21
TRAF3IP1-201ENST00000373327 ZNF879B4DU55 563 aa16.39■□□□□ 0.21
TRAF3IP1-201ENST00000373327 ZNF823P16415 610 aa16.39■□□□□ 0.21
TRAF3IP1-201ENST00000373327 GIFP27352 417 aa16.39■□□□□ 0.21
TRAF3IP1-201ENST00000373327 DHPSP49366 369 aaPredicted RBP16.39■□□□□ 0.21
TRAF3IP1-201ENST00000373327 SCGB2B2Q4G0G5 96 aa16.39■□□□□ 0.21
TRAF3IP1-201ENST00000373327 RNF165Q6ZSG1 346 aa16.39■□□□□ 0.21
TRAF3IP1-201ENST00000373327 KDM8Q8N371 416 aa16.39■□□□□ 0.21
TRAF3IP1-201ENST00000373327 SLC6A18Q96N87 628 aa16.39■□□□□ 0.21
TRAF3IP1-201ENST00000373327 TAPBPLQ9BX59 468 aa16.39■□□□□ 0.21
TRAF3IP1-201ENST00000373327 TAS2R10Q9NYW0 307 aa16.39■□□□□ 0.21
TRAF3IP1-201ENST00000373327 LRIT1Q9P2V4 623 aa16.39■□□□□ 0.21
TRAF3IP1-201ENST00000373327 GPR89AB7ZAQ6 455 aa16.38■□□□□ 0.21
TRAF3IP1-201ENST00000373327 ITGA10O75578 1167 aa16.38■□□□□ 0.21
TRAF3IP1-201ENST00000373327 GPR89BP0CG08 455 aa16.38■□□□□ 0.21
TRAF3IP1-201ENST00000373327 PRAMEF17Q5VTA0 474 aa16.38■□□□□ 0.21
TRAF3IP1-201ENST00000373327 ARHGAP11AQ6P4F7 1023 aa16.38■□□□□ 0.21
TRAF3IP1-201ENST00000373327 SLC35D2Q76EJ3 337 aa16.38■□□□□ 0.21
TRAF3IP1-201ENST00000373327 TRMT61AQ96FX7 289 aaKnown RBP16.38■□□□□ 0.21
TRAF3IP1-201ENST00000373327 NKX3-1Q99801 234 aaPredicted RBP16.38■□□□□ 0.21
TRAF3IP1-201ENST00000373327 VDAC3Q9Y277 283 aa16.38■□□□□ 0.21
TRAF3IP1-201ENST00000373327 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.38■□□□□ 0.21
TRAF3IP1-201ENST00000373327 APBB3O95704 486 aa16.38■□□□□ 0.21
TRAF3IP1-201ENST00000373327 GRM7Q14831 915 aa16.38■□□□□ 0.21
TRAF3IP1-201ENST00000373327 FBXO42Q6P3S6 717 aa16.38■□□□□ 0.21
TRAF3IP1-201ENST00000373327 CCDC80Q76M96 950 aa16.38■□□□□ 0.21
TRAF3IP1-201ENST00000373327 TSEN54Q7Z6J9 526 aaKnown RBP16.38■□□□□ 0.21
TRAF3IP1-201ENST00000373327 OR14A2Q96R54 314 aa16.38■□□□□ 0.21
TRAF3IP1-201ENST00000373327 ITGB1BP2Q9UKP3 347 aa16.38■□□□□ 0.21
TRAF3IP1-201ENST00000373327 FARSAQ9Y285 508 aaKnown RBP16.38■□□□□ 0.21
TRAF3IP1-201ENST00000373327 TEX13CA0A0J9YWL9 993 aa16.38■□□□□ 0.21
TRAF3IP1-201ENST00000373327 CDC42EP2O14613 210 aa16.38■□□□□ 0.21
TRAF3IP1-201ENST00000373327 CSNK1EP49674 416 aaKnown RBP16.38■□□□□ 0.21
TRAF3IP1-201ENST00000373327 PLCXD2Q0VAA5 305 aa16.38■□□□□ 0.21
TRAF3IP1-201ENST00000373327 C1orf94Q6P1W5 598 aa16.38■□□□□ 0.21
TRAF3IP1-201ENST00000373327 ZNF620Q6ZNG0 422 aa16.38■□□□□ 0.21
TRAF3IP1-201ENST00000373327 TMEM151BQ8IW70 566 aa16.38■□□□□ 0.21
TRAF3IP1-201ENST00000373327 TP53I13Q8NBR0 393 aaPredicted RBP16.38■□□□□ 0.21
TRAF3IP1-201ENST00000373327 FAM174AQ8TBP5 190 aa16.38■□□□□ 0.21
TRAF3IP1-201ENST00000373327 GPER1Q99527 375 aa16.38■□□□□ 0.21
TRAF3IP1-201ENST00000373327 PLSCR3Q9NRY6 295 aa16.38■□□□□ 0.21
TRAF3IP1-201ENST00000373327 RXFP3Q9NSD7 469 aa16.38■□□□□ 0.21
TRAF3IP1-201ENST00000373327 HTTP42858 3142 aa16.38■□□□□ 0.21
TRAF3IP1-201ENST00000373327 TPRP12270 2363 aaKnown RBP16.37■□□□□ 0.21
TRAF3IP1-201ENST00000373327 HTR2BP41595 481 aa16.37■□□□□ 0.21
TRAF3IP1-201ENST00000373327 ZP2Q05996 745 aa16.37■□□□□ 0.21
TRAF3IP1-201ENST00000373327 VN1R4Q7Z5H5 301 aa16.37■□□□□ 0.21
TRAF3IP1-201ENST00000373327 KIF18BQ86Y91 864 aa16.37■□□□□ 0.21
TRAF3IP1-201ENST00000373327 GPALPP1Q8IXQ4 340 aa16.37■□□□□ 0.21
TRAF3IP1-201ENST00000373327 PITHD1Q9GZP4 211 aaPredicted RBP16.37■□□□□ 0.21
TRAF3IP1-201ENST00000373327 TMEM72A0PK05 275 aa16.37■□□□□ 0.21
TRAF3IP1-201ENST00000373327 H3BML4 177 aa16.37■□□□□ 0.21
TRAF3IP1-201ENST00000373327 CFIP05156 583 aa16.37■□□□□ 0.21
TRAF3IP1-201ENST00000373327 GIMD1P0DJR0 217 aa16.37■□□□□ 0.21
TRAF3IP1-201ENST00000373327 MAGEB1P43366 347 aa16.37■□□□□ 0.21
TRAF3IP1-201ENST00000373327 RABIFP47224 123 aa16.37■□□□□ 0.21
TRAF3IP1-201ENST00000373327 PSMD4P55036 377 aaKnown RBP16.37■□□□□ 0.21
TRAF3IP1-201ENST00000373327 ATXN7L3Q14CW9 347 aaPredicted RBP16.37■□□□□ 0.21
TRAF3IP1-201ENST00000373327 ITPKCQ96DU7 683 aa16.37■□□□□ 0.21
TRAF3IP1-201ENST00000373327 COX14Q96I36 57 aa16.37■□□□□ 0.21
TRAF3IP1-201ENST00000373327 BTBD2Q9BX70 525 aa16.37■□□□□ 0.21
TRAF3IP1-201ENST00000373327 LMAN1LQ9HAT1 526 aa16.37■□□□□ 0.21
TRAF3IP1-201ENST00000373327 IGKV1-8A0A0C4DH67 115 aa16.37■□□□□ 0.21
TRAF3IP1-201ENST00000373327 PRAMEF27A3QJZ7 478 aa16.37■□□□□ 0.21
TRAF3IP1-201ENST00000373327 STOMP27105 288 aa16.37■□□□□ 0.21
TRAF3IP1-201ENST00000373327 RPS5P46782 204 aaKnown RBP16.37■□□□□ 0.21
TRAF3IP1-201ENST00000373327 DLX2Q07687 328 aaPredicted RBP16.37■□□□□ 0.21
TRAF3IP1-201ENST00000373327 RAB30Q15771 203 aa16.37■□□□□ 0.21
TRAF3IP1-201ENST00000373327 NDUFA5Q16718 116 aa16.37■□□□□ 0.21
TRAF3IP1-201ENST00000373327 SLC29A4Q7RTT9 530 aa16.37■□□□□ 0.21
TRAF3IP1-201ENST00000373327 GALNTL5Q7Z4T8 443 aa16.37■□□□□ 0.21
TRAF3IP1-201ENST00000373327 SLC35F2Q8IXU6 374 aa16.37■□□□□ 0.21
TRAF3IP1-201ENST00000373327 SIRT6Q8N6T7 355 aa16.37■□□□□ 0.21
TRAF3IP1-201ENST00000373327 NR4A3Q92570 626 aa16.37■□□□□ 0.21
TRAF3IP1-201ENST00000373327 G6PC3Q9BUM1 346 aa16.37■□□□□ 0.21
TRAF3IP1-201ENST00000373327 C14orf105Q9NVL8 296 aa16.37■□□□□ 0.21
TRAF3IP1-201ENST00000373327 EP300Q09472 2414 aaPredicted RBP16.37■□□□□ 0.21
TRAF3IP1-201ENST00000373327 POLR1CO15160 346 aaPredicted RBP16.36■□□□□ 0.21
TRAF3IP1-201ENST00000373327 APEHP13798 732 aaKnown RBP16.36■□□□□ 0.21
TRAF3IP1-201ENST00000373327 FPR3P25089 353 aa16.36■□□□□ 0.21
TRAF3IP1-201ENST00000373327 PRKAR1BP31321 381 aa16.36■□□□□ 0.21
TRAF3IP1-201ENST00000373327 HNRNPFP52597 415 aaKnown RBP16.36■□□□□ 0.21
TRAF3IP1-201ENST00000373327 ELOCQ15369 112 aa16.36■□□□□ 0.21
TRAF3IP1-201ENST00000373327 OCLNQ16625 522 aa16.36■□□□□ 0.21
TRAF3IP1-201ENST00000373327 C4orf46Q504U0 113 aa16.36■□□□□ 0.21
TRAF3IP1-201ENST00000373327 TMEM69Q5SWH9 247 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms