RNA–Protein interactions for RNA: ENST00000373010.5

USP49-202, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 5 BASIC

Gene USP49, Length 2,446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-202ENST00000373010 OR5M3Q8NGP4 307 aa17.22■□□□□ 0.35
USP49-202ENST00000373010 SETD6Q8TBK2 473 aa17.22■□□□□ 0.35
USP49-202ENST00000373010 FAM174AQ8TBP5 190 aa17.22■□□□□ 0.35
USP49-202ENST00000373010 ERMAPQ96PL5 475 aaPredicted RBP17.22■□□□□ 0.35
USP49-202ENST00000373010 G6PC3Q9BUM1 346 aa17.22■□□□□ 0.35
USP49-202ENST00000373010 PHF7Q9BWX1 381 aaPredicted RBP17.22■□□□□ 0.35
USP49-202ENST00000373010 RNF32Q9H0A6 362 aa17.22■□□□□ 0.35
USP49-202ENST00000373010 ABCA7Q8IZY2 2146 aa17.22■□□□□ 0.35
USP49-202ENST00000373010 POLR1CO15160 346 aaPredicted RBP17.22■□□□□ 0.35
USP49-202ENST00000373010 ZNF749O43361 778 aa17.22■□□□□ 0.35
USP49-202ENST00000373010 CLPSP04118 112 aa17.22■□□□□ 0.35
USP49-202ENST00000373010 CSF3P09919 207 aa17.22■□□□□ 0.35
USP49-202ENST00000373010 SBK2P0C263 348 aa17.22■□□□□ 0.35
USP49-202ENST00000373010 CASP3P42574 277 aa17.22■□□□□ 0.35
USP49-202ENST00000373010 PYDC2Q56P42 97 aa17.22■□□□□ 0.35
USP49-202ENST00000373010 GATSQ8NAP1 163 aa17.22■□□□□ 0.35
USP49-202ENST00000373010 EFHD2Q96C19 240 aaPredicted RBP17.22■□□□□ 0.35
USP49-202ENST00000373010 CLIP3Q96DZ5 547 aa17.22■□□□□ 0.35
USP49-202ENST00000373010 UCK1Q9HA47 277 aa17.22■□□□□ 0.35
USP49-202ENST00000373010 MALT1Q9UDY8 824 aa17.22■□□□□ 0.35
USP49-202ENST00000373010 PCDHGB2Q9Y5G2 931 aa17.22■□□□□ 0.35
USP49-202ENST00000373010 BLACEA4D250 179 aa17.21■□□□□ 0.35
USP49-202ENST00000373010 SERINC4A6NH21 518 aa17.21■□□□□ 0.35
USP49-202ENST00000373010 RGS9O75916 674 aaPredicted RBP17.21■□□□□ 0.35
USP49-202ENST00000373010 CD1CP29017 333 aa17.21■□□□□ 0.35
USP49-202ENST00000373010 HSD17B7P56937 341 aa17.21■□□□□ 0.35
USP49-202ENST00000373010 DAB2P98082 770 aa17.21■□□□□ 0.35
USP49-202ENST00000373010 BDH1Q02338 343 aa17.21■□□□□ 0.35
USP49-202ENST00000373010 ZNF85Q03923 595 aa17.21■□□□□ 0.35
USP49-202ENST00000373010 UBXN2BQ14CS0 331 aa17.21■□□□□ 0.35
USP49-202ENST00000373010 ARL9Q6T311 187 aa17.21■□□□□ 0.35
USP49-202ENST00000373010 ZNF321PQ8N8H1 164 aa17.21■□□□□ 0.35
USP49-202ENST00000373010 OR52E2Q8NGJ4 325 aa17.21■□□□□ 0.35
USP49-202ENST00000373010 OR4K13Q8NH42 304 aa17.21■□□□□ 0.35
USP49-202ENST00000373010 OR5W2Q8NH69 310 aa17.21■□□□□ 0.35
USP49-202ENST00000373010 ADAMTS18Q8TE60 1221 aa17.21■□□□□ 0.35
USP49-202ENST00000373010 LDHAL6BQ9BYZ2 381 aaPredicted RBP17.21■□□□□ 0.35
USP49-202ENST00000373010 PDE7BQ9NP56 450 aa17.21■□□□□ 0.35
USP49-202ENST00000373010 ZMIZ1Q9ULJ6 1067 aa17.21■□□□□ 0.35
USP49-202ENST00000373010 POLHQ9Y253 713 aa17.21■□□□□ 0.35
USP49-202ENST00000373010 LAMA1P25391 3075 aa17.21■□□□□ 0.35
USP49-202ENST00000373010 E2F1Q01094 437 aa17.21■□□□□ 0.35
USP49-202ENST00000373010 SMAD4Q13485 552 aaKnown RBP17.21■□□□□ 0.35
USP49-202ENST00000373010 GXYLT1Q4G148 440 aa17.21■□□□□ 0.35
USP49-202ENST00000373010 COL13A1Q5TAT6 717 aaPredicted RBP17.21■□□□□ 0.35
USP49-202ENST00000373010 SDR9C7Q8NEX9 313 aa17.21■□□□□ 0.35
USP49-202ENST00000373010 SMPDL3BQ92485 455 aa17.21■□□□□ 0.35
USP49-202ENST00000373010 SENP5Q96HI0 755 aaPredicted RBP17.21■□□□□ 0.35
USP49-202ENST00000373010 YIPF2Q9BWQ6 316 aa17.21■□□□□ 0.35
USP49-202ENST00000373010 TTTY10Q9BZA0 68 aa17.21■□□□□ 0.35
USP49-202ENST00000373010 UCKL1Q9NWZ5 548 aa17.21■□□□□ 0.35
USP49-202ENST00000373010 BAIAP2Q9UQB8 552 aa17.21■□□□□ 0.35
USP49-202ENST00000373010 TLCD2A6NGC4 264 aa17.2■□□□□ 0.34
USP49-202ENST00000373010 A8MUA0 341 aa17.2■□□□□ 0.34
USP49-202ENST00000373010 MCIDASD6RGH6 385 aa17.2■□□□□ 0.34
USP49-202ENST00000373010 J3QLW9 94 aa17.2■□□□□ 0.34
USP49-202ENST00000373010 IMPDH2P12268 514 aa17.2■□□□□ 0.34
USP49-202ENST00000373010 ZNF19P17023 458 aa17.2■□□□□ 0.34
USP49-202ENST00000373010 APEX1P27695 318 aaKnown RBP17.2■□□□□ 0.34
USP49-202ENST00000373010 HCCSP53701 268 aa17.2■□□□□ 0.34
USP49-202ENST00000373010 PPP3R1P63098 170 aa17.2■□□□□ 0.34
USP49-202ENST00000373010 CNIH2Q6PI25 160 aa17.2■□□□□ 0.34
USP49-202ENST00000373010 SSX6Q7RTT6 188 aa17.2■□□□□ 0.34
USP49-202ENST00000373010 SGTBQ96EQ0 304 aa17.2■□□□□ 0.34
USP49-202ENST00000373010 C4orf36Q96KX1 117 aa17.2■□□□□ 0.34
USP49-202ENST00000373010 PPIL3Q9H2H8 161 aaKnown RBP17.2■□□□□ 0.34
USP49-202ENST00000373010 TRIM36Q9NQ86 728 aa17.2■□□□□ 0.34
USP49-202ENST00000373010 IER3IP1Q9Y5U9 82 aa17.2■□□□□ 0.34
USP49-202ENST00000373010 CLCA3PQ9Y6N3 262 aa17.2■□□□□ 0.34
USP49-202ENST00000373010 C17orf105B2RV13 164 aa17.2■□□□□ 0.34
USP49-202ENST00000373010 AGRPO00253 132 aa17.2■□□□□ 0.34
USP49-202ENST00000373010 MT-ND5P03915 603 aa17.2■□□□□ 0.34
USP49-202ENST00000373010 GAAP10253 952 aa17.2■□□□□ 0.34
USP49-202ENST00000373010 HIST1H1CP16403 213 aaKnown RBP17.2■□□□□ 0.34
USP49-202ENST00000373010 PSMD4P55036 377 aaKnown RBP17.2■□□□□ 0.34
USP49-202ENST00000373010 OR2B6P58173 313 aa17.2■□□□□ 0.34
USP49-202ENST00000373010 OR12D2P58182 307 aa17.2■□□□□ 0.34
USP49-202ENST00000373010 SCN1BQ07699 218 aa17.2■□□□□ 0.34
USP49-202ENST00000373010 ARHGAP11AQ6P4F7 1023 aa17.2■□□□□ 0.34
USP49-202ENST00000373010 RPTNQ6XPR3 784 aa17.2■□□□□ 0.34
USP49-202ENST00000373010 NR2C2APQ86WQ0 139 aa17.2■□□□□ 0.34
USP49-202ENST00000373010 GHDCQ8N2G8 530 aa17.2■□□□□ 0.34
USP49-202ENST00000373010 RFLNBQ8N5W9 214 aa17.2■□□□□ 0.34
USP49-202ENST00000373010 GDPD1Q8N9F7 314 aa17.2■□□□□ 0.34
USP49-202ENST00000373010 ZSCAN1Q8NBB4 408 aa17.2■□□□□ 0.34
USP49-202ENST00000373010 FAM98AQ8NCA5 519 aaKnown RBP17.2■□□□□ 0.34
USP49-202ENST00000373010 OR51L1Q8NGJ5 315 aa17.2■□□□□ 0.34
USP49-202ENST00000373010 FOXQ1Q9C009 403 aa17.2■□□□□ 0.34
USP49-202ENST00000373010 MKKSQ9NPJ1 570 aaPredicted RBP17.2■□□□□ 0.34
USP49-202ENST00000373010 PNO1Q9NRX1 252 aaKnown RBP17.2■□□□□ 0.34
USP49-202ENST00000373010 CHRNA9Q9UGM1 479 aa17.2■□□□□ 0.34
USP49-202ENST00000373010 ADAM18Q9Y3Q7 739 aa17.2■□□□□ 0.34
USP49-202ENST00000373010 SPAG17Q6Q759 2223 aa17.19■□□□□ 0.34
USP49-202ENST00000373010 ATP6V1G1O75348 118 aa17.19■□□□□ 0.34
USP49-202ENST00000373010 OR1D4P47884 311 aa17.19■□□□□ 0.34
USP49-202ENST00000373010 TMED10P49755 219 aaKnown RBP17.19■□□□□ 0.34
USP49-202ENST00000373010 SLC3A1Q07837 685 aa17.19■□□□□ 0.34
USP49-202ENST00000373010 GPR50Q13585 617 aa17.19■□□□□ 0.34
USP49-202ENST00000373010 FAM27D1Q5T7N8 215 aa17.19■□□□□ 0.34
USP49-202ENST00000373010 FAAH2Q6GMR7 532 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms