RNA–Protein interactions for RNA: ENST00000372748.7

COL9A2-202, Transcript of collagen type IX alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A2, Length 2,862 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-202ENST00000372748 TMEM64Q6YI46 380 aa13.71□□□□□ -0.22
COL9A2-202ENST00000372748 ZNF765Q7L2R6 523 aa13.71□□□□□ -0.22
COL9A2-202ENST00000372748 ARL14Q8N4G2 192 aa13.71□□□□□ -0.22
COL9A2-202ENST00000372748 ACOT4Q8N9L9 421 aa13.71□□□□□ -0.22
COL9A2-202ENST00000372748 FERD3LQ96RJ6 166 aa13.71□□□□□ -0.22
COL9A2-202ENST00000372748 REG4Q9BYZ8 158 aa13.71□□□□□ -0.22
COL9A2-202ENST00000372748 KLK11Q9UBX7 282 aa13.71□□□□□ -0.22
COL9A2-202ENST00000372748 ATG2BQ96BY7 2078 aa13.71□□□□□ -0.22
COL9A2-202ENST00000372748 L7N2F9 121 aa13.7□□□□□ -0.22
COL9A2-202ENST00000372748 BHLHE40O14503 412 aa13.7□□□□□ -0.22
COL9A2-202ENST00000372748 PCDH8O95206 1070 aa13.7□□□□□ -0.22
COL9A2-202ENST00000372748 CAMK1Q14012 370 aa13.7□□□□□ -0.22
COL9A2-202ENST00000372748 SLC44A3Q8N4M1 653 aa13.7□□□□□ -0.22
COL9A2-202ENST00000372748 OR51L1Q8NGJ5 315 aa13.7□□□□□ -0.22
COL9A2-202ENST00000372748 OR13C2Q8NGS9 318 aa13.7□□□□□ -0.22
COL9A2-202ENST00000372748 OR51A7Q8NH64 312 aa13.7□□□□□ -0.22
COL9A2-202ENST00000372748 SMPDL3BQ92485 455 aa13.7□□□□□ -0.22
COL9A2-202ENST00000372748 CDS1Q92903 461 aa13.7□□□□□ -0.22
COL9A2-202ENST00000372748 FBXW5Q969U6 566 aa13.7□□□□□ -0.22
COL9A2-202ENST00000372748 ELP4Q96EB1 424 aa13.7□□□□□ -0.22
COL9A2-202ENST00000372748 SLC35A4Q96G79 324 aa13.7□□□□□ -0.22
COL9A2-202ENST00000372748 RADILQ96JH8 1075 aa13.7□□□□□ -0.22
COL9A2-202ENST00000372748 CD180Q99467 661 aa13.7□□□□□ -0.22
COL9A2-202ENST00000372748 MENTQ9BUN1 341 aa13.7□□□□□ -0.22
COL9A2-202ENST00000372748 SARGQ9BW04 601 aa13.7□□□□□ -0.22
COL9A2-202ENST00000372748 ACTR6Q9GZN1 396 aa13.7□□□□□ -0.22
COL9A2-202ENST00000372748 ANKRD19PQ9H560 264 aa13.7□□□□□ -0.22
COL9A2-202ENST00000372748 ZNF69Q9UC07 566 aa13.7□□□□□ -0.22
COL9A2-202ENST00000372748 NPFFR2Q9Y5X5 522 aa13.7□□□□□ -0.22
COL9A2-202ENST00000372748 TRAV27A0A087WT01 109 aa13.7□□□□□ -0.22
COL9A2-202ENST00000372748 TCRBV16S1A1N1A0A5B0 115 aa13.7□□□□□ -0.22
COL9A2-202ENST00000372748 TBC1D3BA6NDS4 549 aa13.7□□□□□ -0.22
COL9A2-202ENST00000372748 FLRT2O43155 660 aa13.7□□□□□ -0.22
COL9A2-202ENST00000372748 SBK2P0C263 348 aa13.7□□□□□ -0.22
COL9A2-202ENST00000372748 CDK3Q00526 305 aa13.7□□□□□ -0.22
COL9A2-202ENST00000372748 FOXK2Q01167 660 aa13.7□□□□□ -0.22
COL9A2-202ENST00000372748 TCEA2Q15560 299 aa13.7□□□□□ -0.22
COL9A2-202ENST00000372748 PUS10Q3MIT2 529 aaKnown RBP13.7□□□□□ -0.22
COL9A2-202ENST00000372748 ETFBKMTQ8IXQ9 262 aa13.7□□□□□ -0.22
COL9A2-202ENST00000372748 CMTM4Q8IZR5 234 aa13.7□□□□□ -0.22
COL9A2-202ENST00000372748 SPPL3Q8TCT6 385 aa13.7□□□□□ -0.22
COL9A2-202ENST00000372748 ADAMTS15Q8TE58 950 aa13.7□□□□□ -0.22
COL9A2-202ENST00000372748 SMIM4Q8WVI0 70 aa13.7□□□□□ -0.22
COL9A2-202ENST00000372748 SIPA1Q96FS4 1042 aa13.7□□□□□ -0.22
COL9A2-202ENST00000372748 OR14A2Q96R54 314 aa13.7□□□□□ -0.22
COL9A2-202ENST00000372748 ADGRL4Q9HBW9 690 aa13.7□□□□□ -0.22
COL9A2-202ENST00000372748 HRASLSQ9HDD0 168 aa13.7□□□□□ -0.22
COL9A2-202ENST00000372748 ADAM29Q9UKF5 820 aa13.7□□□□□ -0.22
COL9A2-202ENST00000372748 CAMK2AQ9UQM7 478 aa13.7□□□□□ -0.22
COL9A2-202ENST00000372748 SLC27A6Q9Y2P4 619 aa13.7□□□□□ -0.22
COL9A2-202ENST00000372748 H3BUI4 141 aa13.69□□□□□ -0.22
COL9A2-202ENST00000372748 EMC8O43402 210 aa13.69□□□□□ -0.22
COL9A2-202ENST00000372748 CSNK2A2P19784 350 aaPredicted RBP13.69□□□□□ -0.22
COL9A2-202ENST00000372748 PSMB1P20618 241 aaKnown RBP13.69□□□□□ -0.22
COL9A2-202ENST00000372748 ZP3P21754 424 aa13.69□□□□□ -0.22
COL9A2-202ENST00000372748 HIST1H1TP22492 207 aaPredicted RBP13.69□□□□□ -0.22
COL9A2-202ENST00000372748 BCL6P41182 706 aa13.69□□□□□ -0.22
COL9A2-202ENST00000372748 CCR9P51686 369 aa13.69□□□□□ -0.22
COL9A2-202ENST00000372748 RAG2P55895 527 aa13.69□□□□□ -0.22
COL9A2-202ENST00000372748 OC90Q02509 493 aaPredicted RBP13.69□□□□□ -0.22
COL9A2-202ENST00000372748 CRMP1Q14194 572 aa13.69□□□□□ -0.22
COL9A2-202ENST00000372748 GPR68Q15743 365 aa13.69□□□□□ -0.22
COL9A2-202ENST00000372748 HES5Q5TA89 166 aa13.69□□□□□ -0.22
COL9A2-202ENST00000372748 METRNLQ641Q3 311 aa13.69□□□□□ -0.22
COL9A2-202ENST00000372748 OR5M10Q6IEU7 315 aa13.69□□□□□ -0.22
COL9A2-202ENST00000372748 FAM111BQ6SJ93 734 aa13.69□□□□□ -0.22
COL9A2-202ENST00000372748 NHLRC1Q6VVB1 395 aa13.69□□□□□ -0.22
COL9A2-202ENST00000372748 SLITRK4Q8IW52 837 aa13.69□□□□□ -0.22
COL9A2-202ENST00000372748 ZNF764Q96H86 408 aaPredicted RBP13.69□□□□□ -0.22
COL9A2-202ENST00000372748 HS6ST2Q96MM7 605 aa13.69□□□□□ -0.22
COL9A2-202ENST00000372748 MBNL1Q9NR56 388 aaKnown RBP13.69□□□□□ -0.22
COL9A2-202ENST00000372748 WSB2Q9NYS7 404 aaPredicted RBP13.69□□□□□ -0.22
COL9A2-202ENST00000372748 ZNF443Q9Y2A4 671 aaPredicted RBP13.69□□□□□ -0.22
COL9A2-202ENST00000372748 MFSD2BA6NFX1 497 aa13.69□□□□□ -0.22
COL9A2-202ENST00000372748 OR5F1O95221 314 aa13.69□□□□□ -0.22
COL9A2-202ENST00000372748 SLC35G4P0C7Q5 338 aa13.69□□□□□ -0.22
COL9A2-202ENST00000372748 SAGP10523 405 aaPredicted RBP13.69□□□□□ -0.22
COL9A2-202ENST00000372748 ANXA7P20073 488 aaKnown RBP13.69□□□□□ -0.22
COL9A2-202ENST00000372748 ATP5A1P25705 553 aaKnown RBP13.69□□□□□ -0.22
COL9A2-202ENST00000372748 PRKAR1BP31321 381 aa13.69□□□□□ -0.22
COL9A2-202ENST00000372748 CLDN12P56749 244 aa13.69□□□□□ -0.22
COL9A2-202ENST00000372748 HTRA4P83105 476 aaPredicted RBP13.69□□□□□ -0.22
COL9A2-202ENST00000372748 TMEM52BQ4KMG9 183 aa13.69□□□□□ -0.22
COL9A2-202ENST00000372748 HSD17B12Q53GQ0 312 aa13.69□□□□□ -0.22
COL9A2-202ENST00000372748 DMKNQ6E0U4 476 aaPredicted RBP13.69□□□□□ -0.22
COL9A2-202ENST00000372748 FAM198BQ6UWH4 519 aa13.69□□□□□ -0.22
COL9A2-202ENST00000372748 APOOLQ6UXV4 268 aa13.69□□□□□ -0.22
COL9A2-202ENST00000372748 ZNF836Q6ZNA1 936 aa13.69□□□□□ -0.22
COL9A2-202ENST00000372748 FRRS1Q6ZNA5 592 aa13.69□□□□□ -0.22
COL9A2-202ENST00000372748 DGLUCYQ7Z3D6 616 aa13.69□□□□□ -0.22
COL9A2-202ENST00000372748 UXS1Q8NBZ7 420 aa13.69□□□□□ -0.22
COL9A2-202ENST00000372748 OR52I2Q8NH67 350 aa13.69□□□□□ -0.22
COL9A2-202ENST00000372748 COX14Q96I36 57 aa13.69□□□□□ -0.22
COL9A2-202ENST00000372748 PRSS27Q9BQR3 290 aa13.69□□□□□ -0.22
COL9A2-202ENST00000372748 PIPOXQ9P0Z9 390 aa13.69□□□□□ -0.22
COL9A2-202ENST00000372748 KCNK6Q9Y257 313 aa13.69□□□□□ -0.22
COL9A2-202ENST00000372748 PLEKHM1Q9Y4G2 1056 aa13.69□□□□□ -0.22
COL9A2-202ENST00000372748 INSL6Q9Y581 213 aa13.69□□□□□ -0.22
COL9A2-202ENST00000372748 PCP4L1A6NKN8 68 aa13.69□□□□□ -0.22
COL9A2-202ENST00000372748 SLC22A31A6NKX4 558 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms