RNA–Protein interactions for RNA: ENST00000372017.3

SNCG-202, Transcript of synuclein gamma, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCG, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCG-202ENST00000372017 TFF3Q07654 80 aa11.29□□□□□ -0.6
SNCG-202ENST00000372017 MERTKQ12866 999 aa11.29□□□□□ -0.6
SNCG-202ENST00000372017 LARS2Q15031 903 aaKnown RBP11.29□□□□□ -0.6
SNCG-202ENST00000372017 VMACQ2NL98 169 aa11.29□□□□□ -0.6
SNCG-202ENST00000372017 TMEM176BQ3YBM2 270 aaPredicted RBP11.29□□□□□ -0.6
SNCG-202ENST00000372017 DHRS4L2Q6PKH6 230 aa11.29□□□□□ -0.6
SNCG-202ENST00000372017 MAMDC2Q7Z304 686 aaPredicted RBP11.29□□□□□ -0.6
SNCG-202ENST00000372017 FITM2Q8N6M3 262 aa11.29□□□□□ -0.6
SNCG-202ENST00000372017 ANKS4BQ8N8V4 417 aa11.29□□□□□ -0.6
SNCG-202ENST00000372017 C11orf65Q8NCR3 313 aa11.29□□□□□ -0.6
SNCG-202ENST00000372017 GPR32P1Q8NGA4 272 aa11.29□□□□□ -0.6
SNCG-202ENST00000372017 OR4D11Q8NGI4 311 aa11.29□□□□□ -0.6
SNCG-202ENST00000372017 OR10D3Q8NH80 312 aa11.29□□□□□ -0.6
SNCG-202ENST00000372017 LILRB4Q8NHJ6 448 aa11.29□□□□□ -0.6
SNCG-202ENST00000372017 ZNF563Q8TA94 476 aa11.29□□□□□ -0.6
SNCG-202ENST00000372017 FNDC9Q8TBE3 224 aa11.29□□□□□ -0.6
SNCG-202ENST00000372017 TAMM41Q96BW9 452 aa11.29□□□□□ -0.6
SNCG-202ENST00000372017 DNAJA3Q96EY1 480 aa11.29□□□□□ -0.6
SNCG-202ENST00000372017 KLHL15Q96M94 604 aa11.29□□□□□ -0.6
SNCG-202ENST00000372017 ADAM19Q9H013 955 aa11.29□□□□□ -0.6
SNCG-202ENST00000372017 GID8Q9NWU2 228 aa11.29□□□□□ -0.6
SNCG-202ENST00000372017 ZNF232Q9UNY5 417 aa11.29□□□□□ -0.6
SNCG-202ENST00000372017 INTS1Q8N201 2190 aaKnown RBP11.28□□□□□ -0.6
SNCG-202ENST00000372017 CENPEQ02224 2701 aa11.28□□□□□ -0.6
SNCG-202ENST00000372017 FAM90A27PA6NNH2 459 aa11.28□□□□□ -0.6
SNCG-202ENST00000372017 FAAHO00519 579 aa11.28□□□□□ -0.6
SNCG-202ENST00000372017 AQP8O94778 261 aa11.28□□□□□ -0.6
SNCG-202ENST00000372017 RCBTB2O95199 551 aa11.28□□□□□ -0.6
SNCG-202ENST00000372017 FAM107AO95990 144 aa11.28□□□□□ -0.6
SNCG-202ENST00000372017 CD247P20963 164 aa11.28□□□□□ -0.6
SNCG-202ENST00000372017 HTR2AP28223 471 aa11.28□□□□□ -0.6
SNCG-202ENST00000372017 PRDX6P30041 224 aa11.28□□□□□ -0.6
SNCG-202ENST00000372017 CHRNB4P30926 498 aa11.28□□□□□ -0.6
SNCG-202ENST00000372017 PRKAR1BP31321 381 aa11.28□□□□□ -0.6
SNCG-202ENST00000372017 NUDT2P50583 147 aa11.28□□□□□ -0.6
SNCG-202ENST00000372017 SELENBP1Q13228 472 aa11.28□□□□□ -0.6
SNCG-202ENST00000372017 ART3Q13508 389 aa11.28□□□□□ -0.6
SNCG-202ENST00000372017 PON3Q15166 354 aa11.28□□□□□ -0.6
SNCG-202ENST00000372017 ZNF787Q6DD87 383 aa11.28□□□□□ -0.6
SNCG-202ENST00000372017 HACD2Q6Y1H2 254 aa11.28□□□□□ -0.6
SNCG-202ENST00000372017 ESPNLQ6ZVH7 1005 aa11.28□□□□□ -0.6
SNCG-202ENST00000372017 CCDC80Q76M96 950 aa11.28□□□□□ -0.6
SNCG-202ENST00000372017 GRINAQ7Z429 371 aa11.28□□□□□ -0.6
SNCG-202ENST00000372017 GCNT2Q8N0V5 402 aa11.28□□□□□ -0.6
SNCG-202ENST00000372017 OR2V1Q8NHB1 315 aa11.28□□□□□ -0.6
SNCG-202ENST00000372017 TMEM234Q8WY98 164 aa11.28□□□□□ -0.6
SNCG-202ENST00000372017 WNT2BQ93097 391 aa11.28□□□□□ -0.6
SNCG-202ENST00000372017 INTS12Q96CB8 462 aaKnown RBP11.28□□□□□ -0.6
SNCG-202ENST00000372017 REXO5Q96IC2 774 aaKnown RBP11.28□□□□□ -0.6
SNCG-202ENST00000372017 ARL5BQ96KC2 179 aa11.28□□□□□ -0.6
SNCG-202ENST00000372017 ECSITQ9BQ95 431 aa11.28□□□□□ -0.6
SNCG-202ENST00000372017 OR11A1Q9GZK7 315 aa11.28□□□□□ -0.6
SNCG-202ENST00000372017 EFCAB1Q9HAE3 211 aa11.28□□□□□ -0.6
SNCG-202ENST00000372017 COQ3Q9NZJ6 369 aa11.28□□□□□ -0.6
SNCG-202ENST00000372017 OSGIN1Q9UJX0 560 aa11.28□□□□□ -0.6
SNCG-202ENST00000372017 ANGPT4Q9Y264 503 aa11.28□□□□□ -0.6
SNCG-202ENST00000372017 ITPR2Q14571 2701 aa11.27□□□□□ -0.61
SNCG-202ENST00000372017 TMED7-TICAM2A0A0A6YYA0 188 aa11.27□□□□□ -0.61
SNCG-202ENST00000372017 IGHV3-15A0A0B4J1V0 119 aa11.27□□□□□ -0.61
SNCG-202ENST00000372017 TMEM72A0PK05 275 aa11.27□□□□□ -0.61
SNCG-202ENST00000372017 ZC3H12DA2A288 527 aaKnown RBP11.27□□□□□ -0.61
SNCG-202ENST00000372017 SLC22A20A6NK97 555 aa11.27□□□□□ -0.61
SNCG-202ENST00000372017 HSPB2A8KAH6 182 aa11.27□□□□□ -0.61
SNCG-202ENST00000372017 FAM220BPB1ANY3 271 aa11.27□□□□□ -0.61
SNCG-202ENST00000372017 PRSS44E7EML9 344 aa11.27□□□□□ -0.61
SNCG-202ENST00000372017 TNFSF13O75888 250 aa11.27□□□□□ -0.61
SNCG-202ENST00000372017 IL2RAP01589 272 aa11.27□□□□□ -0.61
SNCG-202ENST00000372017 CCNA2P20248 432 aa11.27□□□□□ -0.61
SNCG-202ENST00000372017 HTR1EP28566 365 aa11.27□□□□□ -0.61
SNCG-202ENST00000372017 TACR3P29371 465 aa11.27□□□□□ -0.61
SNCG-202ENST00000372017 APOBEC1P41238 236 aaKnown RBP11.27□□□□□ -0.61
SNCG-202ENST00000372017 SLC1A3P43003 542 aa11.27□□□□□ -0.61
SNCG-202ENST00000372017 KCNJ5P48544 419 aa11.27□□□□□ -0.61
SNCG-202ENST00000372017 SLC7A2P52569 658 aa11.27□□□□□ -0.61
SNCG-202ENST00000372017 EEFSECP57772 596 aaKnown RBP11.27□□□□□ -0.61
SNCG-202ENST00000372017 RPS3AP61247 264 aaKnown RBP11.27□□□□□ -0.61
SNCG-202ENST00000372017 GUSBP1Q15486 140 aa11.27□□□□□ -0.61
SNCG-202ENST00000372017 HSPB2Q16082 182 aa11.27□□□□□ -0.61
SNCG-202ENST00000372017 FAM91A1Q658Y4 838 aa11.27□□□□□ -0.61
SNCG-202ENST00000372017 HBMQ6B0K9 141 aa11.27□□□□□ -0.61
SNCG-202ENST00000372017 TSPYL5Q86VY4 417 aaPredicted RBP11.27□□□□□ -0.61
SNCG-202ENST00000372017 RBM45Q8IUH3 476 aaKnown RBP11.27□□□□□ -0.61
SNCG-202ENST00000372017 ARMC8Q8IUR7 673 aa11.27□□□□□ -0.61
SNCG-202ENST00000372017 CA5BP1Q8WTZ4 195 aa11.27□□□□□ -0.61
SNCG-202ENST00000372017 ASB5Q8WWX0 329 aa11.27□□□□□ -0.61
SNCG-202ENST00000372017 ROBO4Q8WZ75 1007 aa11.27□□□□□ -0.61
SNCG-202ENST00000372017 OSTF1Q92882 214 aa11.27□□□□□ -0.61
SNCG-202ENST00000372017 CMTM5Q96DZ9 223 aa11.27□□□□□ -0.61
SNCG-202ENST00000372017 LRRC37BQ96QE4 947 aa11.27□□□□□ -0.61
SNCG-202ENST00000372017 SH3GL1Q99961 368 aa11.27□□□□□ -0.61
SNCG-202ENST00000372017 RNF122Q9H9V4 155 aa11.27□□□□□ -0.61
SNCG-202ENST00000372017 NPDC1Q9NQX5 325 aaPredicted RBP11.27□□□□□ -0.61
SNCG-202ENST00000372017 PACSIN3Q9UKS6 424 aa11.27□□□□□ -0.61
SNCG-202ENST00000372017 TMED7Q9Y3B3 224 aa11.27□□□□□ -0.61
SNCG-202ENST00000372017 LGI1O95970 557 aa11.26□□□□□ -0.61
SNCG-202ENST00000372017 TMIGD3P0DMS9 266 aaPredicted RBP11.26□□□□□ -0.61
SNCG-202ENST00000372017 BMP5P22003 454 aa11.26□□□□□ -0.61
SNCG-202ENST00000372017 CTSSP25774 331 aa11.26□□□□□ -0.61
SNCG-202ENST00000372017 CARD18P57730 90 aa11.26□□□□□ -0.61
SNCG-202ENST00000372017 PSME3P61289 254 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms