RNA–Protein interactions for RNA: ENST00000371817.7

COL5A1-201, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL5A1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-201ENST00000371817 HEMK1Q9Y5R4 338 aaPredicted RBP14.37□□□□□ -0.11
COL5A1-201ENST00000371817 HEATR5BQ9P2D3 2071 aa14.37□□□□□ -0.11
COL5A1-201ENST00000371817 FBXO45P0C2W1 286 aa14.37□□□□□ -0.11
COL5A1-201ENST00000371817 HBMQ6B0K9 141 aa14.37□□□□□ -0.11
COL5A1-201ENST00000371817 CHADLQ6NUI6 762 aa14.37□□□□□ -0.11
COL5A1-201ENST00000371817 OR51L1Q8NGJ5 315 aa14.37□□□□□ -0.11
COL5A1-201ENST00000371817 ECHDC3Q96DC8 303 aa14.37□□□□□ -0.11
COL5A1-201ENST00000371817 ADGRB3O60242 1522 aa14.37□□□□□ -0.11
COL5A1-201ENST00000371817 METTL15A6NJ78 407 aa14.37□□□□□ -0.11
COL5A1-201ENST00000371817 KCNK5O95279 499 aa14.37□□□□□ -0.11
COL5A1-201ENST00000371817 PMS2P2O95744 297 aa14.37□□□□□ -0.11
COL5A1-201ENST00000371817 TNFP01375 233 aa14.37□□□□□ -0.11
COL5A1-201ENST00000371817 SLC35E2BP0CK96 405 aa14.37□□□□□ -0.11
COL5A1-201ENST00000371817 OR13C9Q8NGT0 318 aa14.37□□□□□ -0.11
COL5A1-201ENST00000371817 CPNE4Q96A23 557 aaPredicted RBP14.37□□□□□ -0.11
COL5A1-201ENST00000371817 PLAGL1Q9UM63 463 aa14.37□□□□□ -0.11
COL5A1-201ENST00000371817 ADGRB2O60241 1585 aa14.37□□□□□ -0.11
COL5A1-201ENST00000371817 WASP42768 502 aa14.37□□□□□ -0.11
COL5A1-201ENST00000371817 RNF144AP50876 292 aaPredicted RBP14.37□□□□□ -0.11
COL5A1-201ENST00000371817 BAXQ07812 192 aa14.37□□□□□ -0.11
COL5A1-201ENST00000371817 GALNT2Q10471 571 aa14.37□□□□□ -0.11
COL5A1-201ENST00000371817 TMEM183BQ1AE95 376 aa14.37□□□□□ -0.11
COL5A1-201ENST00000371817 LPCAT3Q6P1A2 487 aa14.37□□□□□ -0.11
COL5A1-201ENST00000371817 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.37□□□□□ -0.11
COL5A1-201ENST00000371817 HMGN2P46Q86SG4 172 aa14.37□□□□□ -0.11
COL5A1-201ENST00000371817 GATSQ8NAP1 163 aa14.37□□□□□ -0.11
COL5A1-201ENST00000371817 OR9A4Q8NGU2 314 aa14.37□□□□□ -0.11
COL5A1-201ENST00000371817 BRI3BPQ8WY22 251 aa14.37□□□□□ -0.11
COL5A1-201ENST00000371817 DUSP22Q9NRW4 184 aa14.37□□□□□ -0.11
COL5A1-201ENST00000371817 GMEB2Q9UKD1 530 aa14.37□□□□□ -0.11
COL5A1-201ENST00000371817 SVILO95425 2214 aa14.36□□□□□ -0.11
COL5A1-201ENST00000371817 ASGR2P07307 311 aa14.36□□□□□ -0.11
COL5A1-201ENST00000371817 Q3ZCU0 254 aa14.36□□□□□ -0.11
COL5A1-201ENST00000371817 OR52N2Q8NGI0 321 aa14.36□□□□□ -0.11
COL5A1-201ENST00000371817 SLC25A21Q9BQT8 299 aaPredicted RBP14.36□□□□□ -0.11
COL5A1-201ENST00000371817 TRPM6Q9BX84 2022 aa14.36□□□□□ -0.11
COL5A1-201ENST00000371817 LPLP06858 475 aa14.36□□□□□ -0.11
COL5A1-201ENST00000371817 AADACP22760 399 aa14.36□□□□□ -0.11
COL5A1-201ENST00000371817 SLC6A19Q695T7 634 aa14.36□□□□□ -0.11
COL5A1-201ENST00000371817 FAM103A1Q9BTL3 118 aaKnown RBP14.36□□□□□ -0.11
COL5A1-201ENST00000371817 OR8D2Q9GZM6 311 aa14.36□□□□□ -0.11
COL5A1-201ENST00000371817 TCRBV3S1A0A5B6 114 aa14.36□□□□□ -0.11
COL5A1-201ENST00000371817 TMEM200CA6NKL6 621 aa14.36□□□□□ -0.11
COL5A1-201ENST00000371817 FUCA1P04066 466 aa14.36□□□□□ -0.11
COL5A1-201ENST00000371817 RACK1P63244 317 aaKnown RBP14.36□□□□□ -0.11
COL5A1-201ENST00000371817 GPLD1P80108 840 aa14.36□□□□□ -0.11
COL5A1-201ENST00000371817 GHRHRQ02643 423 aa14.36□□□□□ -0.11
COL5A1-201ENST00000371817 OR2T2Q6IF00 324 aa14.36□□□□□ -0.11
COL5A1-201ENST00000371817 FUT10Q6P4F1 479 aa14.36□□□□□ -0.11
COL5A1-201ENST00000371817 OR14L1PQ8NHC6 308 aa14.36□□□□□ -0.11
COL5A1-201ENST00000371817 C2orf15Q8WU43 125 aaKnown RBP14.36□□□□□ -0.11
COL5A1-201ENST00000371817 C1orf198Q9H425 327 aa14.36□□□□□ -0.11
COL5A1-201ENST00000371817 SPACA1Q9HBV2 294 aa14.36□□□□□ -0.11
COL5A1-201ENST00000371817 CNIH4Q9P003 139 aa14.36□□□□□ -0.11
COL5A1-201ENST00000371817 A0A087WUU8 490 aa14.36□□□□□ -0.11
COL5A1-201ENST00000371817 SCGB1C2P0DMR2 95 aa14.36□□□□□ -0.11
COL5A1-201ENST00000371817 TACR3P29371 465 aa14.36□□□□□ -0.11
COL5A1-201ENST00000371817 CRABP1P29762 137 aa14.36□□□□□ -0.11
COL5A1-201ENST00000371817 ECI1P42126 302 aa14.36□□□□□ -0.11
COL5A1-201ENST00000371817 KIAA0907Q7Z7F0 614 aaPredicted RBP14.36□□□□□ -0.11
COL5A1-201ENST00000371817 PDZD3Q86UT5 571 aa14.36□□□□□ -0.11
COL5A1-201ENST00000371817 SLC41A2Q96JW4 573 aa14.36□□□□□ -0.11
COL5A1-201ENST00000371817 C1GALT1Q9NS00 363 aa14.36□□□□□ -0.11
COL5A1-201ENST00000371817 CDC123O75794 336 aaPredicted RBP14.36□□□□□ -0.11
COL5A1-201ENST00000371817 POP7O75817 140 aaKnown RBP14.36□□□□□ -0.11
COL5A1-201ENST00000371817 JTBO76095 146 aa14.36□□□□□ -0.11
COL5A1-201ENST00000371817 NDUFB2O95178 105 aa14.36□□□□□ -0.11
COL5A1-201ENST00000371817 BAMBIQ13145 260 aa14.36□□□□□ -0.11
COL5A1-201ENST00000371817 ENDOGQ14249 297 aaKnown RBP14.36□□□□□ -0.11
COL5A1-201ENST00000371817 UBAC2Q8NBM4 344 aa14.36□□□□□ -0.11
COL5A1-201ENST00000371817 INTS12Q96CB8 462 aaKnown RBP14.36□□□□□ -0.11
COL5A1-201ENST00000371817 NDRG2Q9UN36 371 aaKnown RBP14.36□□□□□ -0.11
COL5A1-201ENST00000371817 PDGFBP01127 241 aaPredicted RBP14.36□□□□□ -0.11
COL5A1-201ENST00000371817 ACP2P11117 423 aa14.36□□□□□ -0.11
COL5A1-201ENST00000371817 BTG1P62324 171 aa14.36□□□□□ -0.11
COL5A1-201ENST00000371817 RASD2Q96D21 266 aa14.36□□□□□ -0.11
COL5A1-201ENST00000371817 TMEM19Q96HH6 336 aa14.36□□□□□ -0.11
COL5A1-201ENST00000371817 PARD6AQ9NPB6 346 aa14.36□□□□□ -0.11
COL5A1-201ENST00000371817 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.36□□□□□ -0.11
COL5A1-201ENST00000371817 ZNF281Q9Y2X9 895 aa14.36□□□□□ -0.11
COL5A1-201ENST00000371817 SCG5P05408 212 aa14.36□□□□□ -0.11
COL5A1-201ENST00000371817 BPHLQ86WA6 291 aaPredicted RBP14.36□□□□□ -0.11
COL5A1-201ENST00000371817 LIX1LQ8IVB5 337 aa14.36□□□□□ -0.11
COL5A1-201ENST00000371817 IL1F10Q8WWZ1 152 aa14.36□□□□□ -0.11
COL5A1-201ENST00000371817 MYO7AQ13402 2215 aa14.35□□□□□ -0.11
COL5A1-201ENST00000371817 ARHGAP23Q9P227 1491 aa14.35□□□□□ -0.11
COL5A1-201ENST00000371817 H7BYZ3 331 aa14.35□□□□□ -0.11
COL5A1-201ENST00000371817 K7ERQ8 282 aa14.35□□□□□ -0.11
COL5A1-201ENST00000371817 GBX1Q14549 363 aa14.35□□□□□ -0.11
COL5A1-201ENST00000371817 FCRLBQ6BAA4 426 aa14.35□□□□□ -0.11
COL5A1-201ENST00000371817 LINC00299Q6ZSB3 139 aa14.35□□□□□ -0.11
COL5A1-201ENST00000371817 MFSD6LQ8IWD5 586 aa14.35□□□□□ -0.11
COL5A1-201ENST00000371817 SLC7A6Q92536 515 aa14.35□□□□□ -0.11
COL5A1-201ENST00000371817 DDIT4LQ96D03 193 aa14.35□□□□□ -0.11
COL5A1-201ENST00000371817 MTHFD2LQ9H903 347 aaPredicted RBP14.35□□□□□ -0.11
COL5A1-201ENST00000371817 C12orf10Q9HB07 376 aa14.35□□□□□ -0.11
COL5A1-201ENST00000371817 GALNT9Q9HCQ5 603 aa14.35□□□□□ -0.11
COL5A1-201ENST00000371817 C1orf226A1L170 272 aa14.35□□□□□ -0.11
COL5A1-201ENST00000371817 MSCO60682 206 aa14.35□□□□□ -0.11
COL5A1-201ENST00000371817 OR4Q2P0C623 313 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms