RNA–Protein interactions for RNA: ENST00000362455.1

RNU4-39P-201, Transcript of RNA, U4 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU4-39P, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-39P-201ENST00000362455 K7ENP7 123 aa4.65□□□□□ -1.67
RNU4-39P-201ENST00000362455 XPO1O14980 1071 aaKnown RBP4.65□□□□□ -1.67
RNU4-39P-201ENST00000362455 MAPK13O15264 365 aa4.65□□□□□ -1.67
RNU4-39P-201ENST00000362455 CTSLP07711 333 aa4.65□□□□□ -1.67
RNU4-39P-201ENST00000362455 APRTP07741 180 aa4.65□□□□□ -1.67
RNU4-39P-201ENST00000362455 HIST1H2AGP0C0S8 130 aaPredicted RBP4.65□□□□□ -1.67
RNU4-39P-201ENST00000362455 ZCCHC18P0CG32 403 aa4.65□□□□□ -1.67
RNU4-39P-201ENST00000362455 PKLRP30613 574 aa4.65□□□□□ -1.67
RNU4-39P-201ENST00000362455 FCGR2BP31994 310 aaPredicted RBP4.65□□□□□ -1.67
RNU4-39P-201ENST00000362455 FCGR2CP31995 323 aa4.65□□□□□ -1.67
RNU4-39P-201ENST00000362455 CHRNA3P32297 505 aa4.65□□□□□ -1.67
RNU4-39P-201ENST00000362455 MTIF2P46199 727 aaKnown RBP4.65□□□□□ -1.67
RNU4-39P-201ENST00000362455 ASMTP46597 345 aa4.65□□□□□ -1.67
RNU4-39P-201ENST00000362455 ZFP36L2P47974 494 aaKnown RBP4.65□□□□□ -1.67
RNU4-39P-201ENST00000362455 PSMD8P48556 350 aa4.65□□□□□ -1.67
RNU4-39P-201ENST00000362455 ARRB1P49407 418 aaPredicted RBP4.65□□□□□ -1.67
RNU4-39P-201ENST00000362455 ATP12AP54707 1039 aa4.65□□□□□ -1.67
RNU4-39P-201ENST00000362455 SLC26A5P58743 744 aa4.65□□□□□ -1.67
RNU4-39P-201ENST00000362455 STK38Q15208 465 aa4.65□□□□□ -1.67
RNU4-39P-201ENST00000362455 P2RY14Q15391 338 aa4.65□□□□□ -1.67
RNU4-39P-201ENST00000362455 POM121L1PQ3SYA9 428 aa4.65□□□□□ -1.67
RNU4-39P-201ENST00000362455 MOGAT2Q3SYC2 334 aa4.65□□□□□ -1.67
RNU4-39P-201ENST00000362455 MS4A13Q5J8X5 152 aa4.65□□□□□ -1.67
RNU4-39P-201ENST00000362455 C1orf189Q5VU69 101 aa4.65□□□□□ -1.67
RNU4-39P-201ENST00000362455 SYPL2Q5VXT5 272 aa4.65□□□□□ -1.67
RNU4-39P-201ENST00000362455 TRIM65Q6PJ69 517 aa4.65□□□□□ -1.67
RNU4-39P-201ENST00000362455 HIST2H2ABQ8IUE6 130 aaPredicted RBP4.65□□□□□ -1.67
RNU4-39P-201ENST00000362455 SLC22A18ASQ8N1D0 253 aa4.65□□□□□ -1.67
RNU4-39P-201ENST00000362455 ARHGAP18Q8N392 663 aa4.65□□□□□ -1.67
RNU4-39P-201ENST00000362455 LRRC17Q8N6Y2 441 aa4.65□□□□□ -1.67
RNU4-39P-201ENST00000362455 AQP11Q8NBQ7 271 aa4.65□□□□□ -1.67
RNU4-39P-201ENST00000362455 RELL2Q8NC24 303 aaPredicted RBP4.65□□□□□ -1.67
RNU4-39P-201ENST00000362455 OR4C6Q8NH72 309 aa4.65□□□□□ -1.67
RNU4-39P-201ENST00000362455 P3H4Q92791 437 aa4.65□□□□□ -1.67
RNU4-39P-201ENST00000362455 KLK6Q92876 244 aa4.65□□□□□ -1.67
RNU4-39P-201ENST00000362455 HIST1H2ACQ93077 130 aa4.65□□□□□ -1.67
RNU4-39P-201ENST00000362455 C14orf79Q96F83 325 aa4.65□□□□□ -1.67
RNU4-39P-201ENST00000362455 MED8Q96G25 268 aa4.65□□□□□ -1.67
RNU4-39P-201ENST00000362455 ZNF578Q96N58 590 aaPredicted RBP4.65□□□□□ -1.67
RNU4-39P-201ENST00000362455 LGMNQ99538 433 aa4.65□□□□□ -1.67
RNU4-39P-201ENST00000362455 OMDQ99983 421 aa4.65□□□□□ -1.67
RNU4-39P-201ENST00000362455 TRIM4Q9C037 500 aa4.65□□□□□ -1.67
RNU4-39P-201ENST00000362455 RAB17Q9H0T7 212 aa4.65□□□□□ -1.67
RNU4-39P-201ENST00000362455 ATG10Q9H0Y0 220 aa4.65□□□□□ -1.67
RNU4-39P-201ENST00000362455 NGBQ9NPG2 151 aa4.65□□□□□ -1.67
RNU4-39P-201ENST00000362455 NDE1Q9NXR1 346 aa4.65□□□□□ -1.67
RNU4-39P-201ENST00000362455 SCML1Q9UN30 329 aa4.65□□□□□ -1.67
RNU4-39P-201ENST00000362455 OR51B4Q9Y5P0 310 aa4.65□□□□□ -1.67
RNU4-39P-201ENST00000362455 RNF215Q9Y6U7 377 aa4.65□□□□□ -1.67
RNU4-39P-201ENST00000362455 USP9YO00507 2555 aaPredicted RBP4.65□□□□□ -1.67
RNU4-39P-201ENST00000362455 COL6A6A6NMZ7 2263 aa4.65□□□□□ -1.67
RNU4-39P-201ENST00000362455 UTP20O75691 2785 aaKnown RBP4.65□□□□□ -1.67
RNU4-39P-201ENST00000362455 IGLV7-46A0A075B6I9 117 aa4.64□□□□□ -1.67
RNU4-39P-201ENST00000362455 IGHV3-38A0A0C4DH36 116 aa4.64□□□□□ -1.67
RNU4-39P-201ENST00000362455 MEX3AA1L020 520 aaKnown RBP4.64□□□□□ -1.67
RNU4-39P-201ENST00000362455 TMCO5BA8MYB1 307 aa4.64□□□□□ -1.67
RNU4-39P-201ENST00000362455 K7ERQ8 282 aa4.64□□□□□ -1.67
RNU4-39P-201ENST00000362455 RAD51BO15315 384 aa4.64□□□□□ -1.67
RNU4-39P-201ENST00000362455 SLC31A1O15431 190 aa4.64□□□□□ -1.67
RNU4-39P-201ENST00000362455 YKT6O15498 198 aa4.64□□□□□ -1.67
RNU4-39P-201ENST00000362455 NEBLO76041 1014 aa4.64□□□□□ -1.67
RNU4-39P-201ENST00000362455 YEATS4O95619 227 aa4.64□□□□□ -1.67
RNU4-39P-201ENST00000362455 IL1BP01584 269 aa4.64□□□□□ -1.67
RNU4-39P-201ENST00000362455 FHP07954 510 aa4.64□□□□□ -1.67
RNU4-39P-201ENST00000362455 ID1P41134 155 aa4.64□□□□□ -1.67
RNU4-39P-201ENST00000362455 RPL34P49207 117 aaKnown RBP4.64□□□□□ -1.67
RNU4-39P-201ENST00000362455 CRYBA2P53672 197 aa4.64□□□□□ -1.67
RNU4-39P-201ENST00000362455 TMEM50BP56557 158 aa4.64□□□□□ -1.67
RNU4-39P-201ENST00000362455 ERVPABLB-1P60509 514 aa4.64□□□□□ -1.67
RNU4-39P-201ENST00000362455 HTD2P86397 168 aa4.64□□□□□ -1.67
RNU4-39P-201ENST00000362455 BST2Q10589 180 aaKnown RBP4.64□□□□□ -1.67
RNU4-39P-201ENST00000362455 CALCOCO2Q13137 446 aa4.64□□□□□ -1.67
RNU4-39P-201ENST00000362455 FZD2Q14332 565 aa4.64□□□□□ -1.67
RNU4-39P-201ENST00000362455 SLC17A1Q14916 467 aa4.64□□□□□ -1.67
RNU4-39P-201ENST00000362455 CEBPEQ15744 281 aa4.64□□□□□ -1.67
RNU4-39P-201ENST00000362455 ISXQ2M1V0 245 aa4.64□□□□□ -1.67
RNU4-39P-201ENST00000362455 PIP5KL1Q5T9C9 394 aa4.64□□□□□ -1.67
RNU4-39P-201ENST00000362455 RAET1GQ6H3X3 334 aa4.64□□□□□ -1.67
RNU4-39P-201ENST00000362455 GDPGP1Q6ZNW5 385 aa4.64□□□□□ -1.67
RNU4-39P-201ENST00000362455 TMEM26Q6ZUK4 368 aa4.64□□□□□ -1.67
RNU4-39P-201ENST00000362455 YRDCQ86U90 279 aaKnown RBP4.64□□□□□ -1.67
RNU4-39P-201ENST00000362455 TRIM69Q86WT6 500 aa4.64□□□□□ -1.67
RNU4-39P-201ENST00000362455 METTL4Q8N3J2 472 aa4.64□□□□□ -1.67
RNU4-39P-201ENST00000362455 GVQW1Q8N7I0 195 aa4.64□□□□□ -1.67
RNU4-39P-201ENST00000362455 OR56B1Q8NGI3 324 aa4.64□□□□□ -1.67
RNU4-39P-201ENST00000362455 DQX1Q8TE96 717 aaKnown RBP4.64□□□□□ -1.67
RNU4-39P-201ENST00000362455 RNF139Q8WU17 664 aa4.64□□□□□ -1.67
RNU4-39P-201ENST00000362455 C11orf52Q96A22 123 aa4.64□□□□□ -1.67
RNU4-39P-201ENST00000362455 TMEM45BQ96B21 275 aa4.64□□□□□ -1.67
RNU4-39P-201ENST00000362455 BMFQ96LC9 184 aa4.64□□□□□ -1.67
RNU4-39P-201ENST00000362455 ALKBH3Q96Q83 286 aaPredicted RBP4.64□□□□□ -1.67
RNU4-39P-201ENST00000362455 DCTN5Q9BTE1 182 aa4.64□□□□□ -1.67
RNU4-39P-201ENST00000362455 KRTAP1-5Q9BYS1 174 aa4.64□□□□□ -1.67
RNU4-39P-201ENST00000362455 ZSCAN16Q9H4T2 348 aaPredicted RBP4.64□□□□□ -1.67
RNU4-39P-201ENST00000362455 TMEM231Q9H6L2 316 aa4.64□□□□□ -1.67
RNU4-39P-201ENST00000362455 SLC25A19Q9HC21 320 aa4.64□□□□□ -1.67
RNU4-39P-201ENST00000362455 ABCC13Q9NSE7 274 aa4.64□□□□□ -1.67
RNU4-39P-201ENST00000362455 RAB20Q9NX57 234 aa4.64□□□□□ -1.67
RNU4-39P-201ENST00000362455 TAS2R3Q9NYW6 316 aa4.64□□□□□ -1.67
RNU4-39P-201ENST00000362455 IL20RAQ9UHF4 553 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms