RNA–Protein interactions for RNA: ENST00000358278.7

TPM1-206, Transcript of tropomyosin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TPM1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-206ENST00000358278 SLX1AQ9BQ83 275 aa13.78□□□□□ -0.2
TPM1-206ENST00000358278 POLR2J2Q9GZM3 115 aaKnown RBP13.78□□□□□ -0.2
TPM1-206ENST00000358278 POLR2J3Q9H1A7 115 aaKnown RBP13.78□□□□□ -0.2
TPM1-206ENST00000358278 IL1RAPQ9NPH3 570 aa13.78□□□□□ -0.2
TPM1-206ENST00000358278 ENPP4Q9Y6X5 453 aa13.78□□□□□ -0.2
TPM1-206ENST00000358278 ARHGAP21Q5T5U3 1957 aa13.78□□□□□ -0.2
TPM1-206ENST00000358278 A0A0B4J2E0 115 aa13.78□□□□□ -0.2
TPM1-206ENST00000358278 A0A1B0GX12 115 aa13.78□□□□□ -0.2
TPM1-206ENST00000358278 TRAPPC13A5PLN9 417 aa13.78□□□□□ -0.2
TPM1-206ENST00000358278 LINC01387J3KSC0 135 aa13.78□□□□□ -0.2
TPM1-206ENST00000358278 NTN1O95631 604 aa13.78□□□□□ -0.2
TPM1-206ENST00000358278 PRB1P04280 392 aa13.78□□□□□ -0.2
TPM1-206ENST00000358278 RAP2AP10114 183 aa13.78□□□□□ -0.2
TPM1-206ENST00000358278 PEPDP12955 493 aa13.78□□□□□ -0.2
TPM1-206ENST00000358278 POU3F2P20265 443 aaPredicted RBP13.78□□□□□ -0.2
TPM1-206ENST00000358278 CHMP24386 653 aa13.78□□□□□ -0.2
TPM1-206ENST00000358278 CXCR1P25024 350 aa13.78□□□□□ -0.2
TPM1-206ENST00000358278 APOBEC1P41238 236 aaKnown RBP13.78□□□□□ -0.2
TPM1-206ENST00000358278 TDGF1P3P51864 188 aa13.78□□□□□ -0.2
TPM1-206ENST00000358278 GFRA1P56159 465 aa13.78□□□□□ -0.2
TPM1-206ENST00000358278 HSF1Q00613 529 aa13.78□□□□□ -0.2
TPM1-206ENST00000358278 SELENBP1Q13228 472 aa13.78□□□□□ -0.2
TPM1-206ENST00000358278 PIN1Q13526 163 aaPredicted RBP13.78□□□□□ -0.2
TPM1-206ENST00000358278 CCNIQ14094 377 aa13.78□□□□□ -0.2
TPM1-206ENST00000358278 TMEM44Q2T9K0 475 aa13.78□□□□□ -0.2
TPM1-206ENST00000358278 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.78□□□□□ -0.29e-6■■■■□ 24.9
TPM1-206ENST00000358278 C3orf33Q6P1S2 294 aa13.78□□□□□ -0.2
TPM1-206ENST00000358278 ADGRG5Q8IZF4 528 aa13.78□□□□□ -0.2
TPM1-206ENST00000358278 PHF10Q8WUB8 498 aaKnown RBP13.78□□□□□ -0.2
TPM1-206ENST00000358278 SMPDL3BQ92485 455 aa13.78□□□□□ -0.2
TPM1-206ENST00000358278 C7orf34Q96L11 122 aa13.78□□□□□ -0.2
TPM1-206ENST00000358278 ZNF300Q96RE9 604 aaPredicted RBP13.78□□□□□ -0.2
TPM1-206ENST00000358278 TMEM185BQ9H7F4 350 aa13.78□□□□□ -0.2
TPM1-206ENST00000358278 SERINC1Q9NRX5 453 aa13.78□□□□□ -0.2
TPM1-206ENST00000358278 PLSCR2Q9NRY7 297 aa13.78□□□□□ -0.2
TPM1-206ENST00000358278 NDUFAF4Q9P032 175 aa13.78□□□□□ -0.2
TPM1-206ENST00000358278 STOML1Q9UBI4 398 aa13.78□□□□□ -0.2
TPM1-206ENST00000358278 CHRNA9Q9UGM1 479 aa13.78□□□□□ -0.2
TPM1-206ENST00000358278 OSGIN1Q9UJX0 560 aa13.78□□□□□ -0.2
TPM1-206ENST00000358278 TMED7-TICAM2A0A0A6YYA0 188 aa13.77□□□□□ -0.21
TPM1-206ENST00000358278 A0A1B0GTH9 108 aa13.77□□□□□ -0.21
TPM1-206ENST00000358278 ELOA3DA6NLF2 546 aaPredicted RBP13.77□□□□□ -0.21
TPM1-206ENST00000358278 J3KTA2 159 aa13.77□□□□□ -0.21
TPM1-206ENST00000358278 AQP7O14520 342 aa13.77□□□□□ -0.21
TPM1-206ENST00000358278 WISP2O76076 250 aa13.77□□□□□ -0.21
TPM1-206ENST00000358278 DIRAS1O95057 198 aa13.77□□□□□ -0.21
TPM1-206ENST00000358278 WISP1O95388 367 aa13.77□□□□□ -0.21
TPM1-206ENST00000358278 ACTL6AO96019 429 aa13.77□□□□□ -0.21
TPM1-206ENST00000358278 MT-ND1P03886 318 aa13.77□□□□□ -0.21
TPM1-206ENST00000358278 HOXB6P17509 224 aaKnown RBP13.77□□□□□ -0.21
TPM1-206ENST00000358278 DLX5P56178 289 aa13.77□□□□□ -0.21
TPM1-206ENST00000358278 ACTR3P61158 418 aa13.77□□□□□ -0.21
TPM1-206ENST00000358278 ELOA3BQ3SY89 546 aa13.77□□□□□ -0.21
TPM1-206ENST00000358278 SWT1Q5T5J6 900 aaKnown RBP13.77□□□□□ -0.21
TPM1-206ENST00000358278 PRICKLE2Q7Z3G6 844 aa13.77□□□□□ -0.21
TPM1-206ENST00000358278 TSPYL5Q86VY4 417 aaPredicted RBP13.77□□□□□ -0.21
TPM1-206ENST00000358278 ATP6V1C2Q8NEY4 427 aa13.77□□□□□ -0.21
TPM1-206ENST00000358278 ELOA3Q8NG57 546 aa13.77□□□□□ -0.21
TPM1-206ENST00000358278 ABTB1Q969K4 478 aaPredicted RBP13.77□□□□□ -0.21
TPM1-206ENST00000358278 SLC41A3Q96GZ6 507 aa13.77□□□□□ -0.21
TPM1-206ENST00000358278 BARD1Q99728 777 aaKnown RBP13.77□□□□□ -0.21
TPM1-206ENST00000358278 FNDC11Q9BVV2 318 aa13.77□□□□□ -0.21
TPM1-206ENST00000358278 ADAM19Q9H013 955 aa13.77□□□□□ -0.21
TPM1-206ENST00000358278 SLC7A7Q9UM01 511 aa13.77□□□□□ -0.21
TPM1-206ENST00000358278 TMED7Q9Y3B3 224 aa13.77□□□□□ -0.21
TPM1-206ENST00000358278 ZNF337Q9Y3M9 751 aa13.77□□□□□ -0.21
TPM1-206ENST00000358278 SPIN1Q9Y657 262 aaPredicted RBP13.77□□□□□ -0.21
TPM1-206ENST00000358278 A0A1B0GVC2 190 aa13.76□□□□□ -0.21
TPM1-206ENST00000358278 CHP2O43745 196 aa13.76□□□□□ -0.21
TPM1-206ENST00000358278 SEMA7AO75326 666 aa13.76□□□□□ -0.21
TPM1-206ENST00000358278 OR5F1O95221 314 aa13.76□□□□□ -0.21
TPM1-206ENST00000358278 PNMTP11086 282 aa13.76□□□□□ -0.21
TPM1-206ENST00000358278 BMP7P18075 431 aa13.76□□□□□ -0.21
TPM1-206ENST00000358278 RHCEP18577 417 aa13.76□□□□□ -0.21
TPM1-206ENST00000358278 CCNA2P20248 432 aa13.76□□□□□ -0.21
TPM1-206ENST00000358278 SFTPDP35247 375 aa13.76□□□□□ -0.21
TPM1-206ENST00000358278 CDH12P55289 794 aa13.76□□□□□ -0.21
TPM1-206ENST00000358278 FOXD4Q12950 439 aaPredicted RBP13.76□□□□□ -0.21
TPM1-206ENST00000358278 GFRALQ6UXV0 394 aa13.76□□□□□ -0.21
TPM1-206ENST00000358278 ATG4DQ86TL0 474 aaPredicted RBP13.76□□□□□ -0.21
TPM1-206ENST00000358278 LILRA2Q8N149 483 aa13.76□□□□□ -0.21
TPM1-206ENST00000358278 DENND2DQ9H6A0 471 aaPredicted RBP13.76□□□□□ -0.21
TPM1-206ENST00000358278 YY1AP1Q9H869 796 aa13.76□□□□□ -0.21
TPM1-206ENST00000358278 SPRR3Q9UBC9 169 aa13.76□□□□□ -0.21
TPM1-206ENST00000358278 TNFRSF10DQ9UBN6 386 aa13.76□□□□□ -0.21
TPM1-206ENST00000358278 RIMS3Q9UJD0 308 aa13.76□□□□□ -0.21
TPM1-206ENST00000358278 A4GNTQ9UNA3 340 aa13.76□□□□□ -0.21
TPM1-206ENST00000358278 ESPL1Q14674 2120 aa13.76□□□□□ -0.21
TPM1-206ENST00000358278 SEC14L5O43304 696 aa13.76□□□□□ -0.21
TPM1-206ENST00000358278 EDN3P14138 238 aa13.76□□□□□ -0.21
TPM1-206ENST00000358278 IL11P20809 199 aa13.76□□□□□ -0.21
TPM1-206ENST00000358278 MAGEA2P43356 314 aa13.76□□□□□ -0.21
TPM1-206ENST00000358278 ST3GAL3Q11203 375 aa13.76□□□□□ -0.21
TPM1-206ENST00000358278 SOWAHCQ53LP3 525 aaPredicted RBP13.76□□□□□ -0.21
TPM1-206ENST00000358278 NHSL2Q5HYW2 709 aa13.76□□□□□ -0.21
TPM1-206ENST00000358278 VASNQ6EMK4 673 aa13.76□□□□□ -0.21
TPM1-206ENST00000358278 GDF7Q7Z4P5 450 aa13.76□□□□□ -0.21
TPM1-206ENST00000358278 ADGRG3Q86Y34 549 aa13.76□□□□□ -0.21
TPM1-206ENST00000358278 UBQLNLQ8IYU4 475 aa13.76□□□□□ -0.21
TPM1-206ENST00000358278 OFCC1Q8IZS5 231 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms