RNA–Protein interactions for RNA: ENST00000357604.9

UPF2-202, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,193 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-202ENST00000357604 INTS12Q96CB8 462 aaKnown RBP8.39□□□□□ -1.07
UPF2-202ENST00000357604 ZNF570Q96NI8 536 aa8.39□□□□□ -1.07
UPF2-202ENST00000357604 C20orf27Q9GZN8 174 aa8.39□□□□□ -1.07
UPF2-202ENST00000357604 DCLRE1BQ9H816 532 aa8.39□□□□□ -1.07
UPF2-202ENST00000357604 ZNF175Q9Y473 711 aa8.39□□□□□ -1.07
UPF2-202ENST00000357604 OR2W5A6NFC9 320 aa8.39□□□□□ -1.07
UPF2-202ENST00000357604 CH25HO95992 272 aa8.39□□□□□ -1.07
UPF2-202ENST00000357604 FRKP42685 505 aaPredicted RBP8.39□□□□□ -1.07
UPF2-202ENST00000357604 MAGEA5P43359 124 aa8.39□□□□□ -1.07
UPF2-202ENST00000357604 GTDC1Q4AE62 458 aa8.39□□□□□ -1.07
UPF2-202ENST00000357604 IGFL3Q6UXB1 125 aa8.39□□□□□ -1.07
UPF2-202ENST00000357604 OR52J3Q8NH60 311 aa8.39□□□□□ -1.07
UPF2-202ENST00000357604 POTEKPQ9BYX7 375 aa8.39□□□□□ -1.07
UPF2-202ENST00000357604 VAPAQ9P0L0 249 aa8.39□□□□□ -1.07
UPF2-202ENST00000357604 AGAP5A6NIR3 686 aa8.38□□□□□ -1.07
UPF2-202ENST00000357604 ZNF208O43345 1280 aa8.38□□□□□ -1.07
UPF2-202ENST00000357604 GKN3PP0CG01 181 aa8.38□□□□□ -1.07
UPF2-202ENST00000357604 IGFBP5P24593 272 aa8.38□□□□□ -1.07
UPF2-202ENST00000357604 YAP1P46937 504 aaKnown RBP8.38□□□□□ -1.07
UPF2-202ENST00000357604 RPS23P62266 143 aaKnown RBP8.38□□□□□ -1.07
UPF2-202ENST00000357604 VLDLRP98155 873 aa8.38□□□□□ -1.07
UPF2-202ENST00000357604 SNAPC1Q16533 368 aa8.38□□□□□ -1.07
UPF2-202ENST00000357604 EXOC3L2Q2M3D2 409 aa8.38□□□□□ -1.07
UPF2-202ENST00000357604 ALG10Q5BKT4 473 aa8.38□□□□□ -1.07
UPF2-202ENST00000357604 CBLL1Q75N03 491 aa8.38□□□□□ -1.07
UPF2-202ENST00000357604 MAVSQ7Z434 540 aa8.38□□□□□ -1.07
UPF2-202ENST00000357604 CD163Q86VB7 1156 aa8.38□□□□□ -1.07
UPF2-202ENST00000357604 FAM83FQ8NEG4 500 aaPredicted RBP8.38□□□□□ -1.07
UPF2-202ENST00000357604 FAR1Q8WVX9 515 aa8.38□□□□□ -1.07
UPF2-202ENST00000357604 MAL2Q969L2 176 aa8.38□□□□□ -1.07
UPF2-202ENST00000357604 C1GALT1C1Q96EU7 318 aa8.38□□□□□ -1.07
UPF2-202ENST00000357604 ZNF681Q96N22 645 aa8.38□□□□□ -1.07
UPF2-202ENST00000357604 RACGAP1Q9H0H5 632 aa8.38□□□□□ -1.07
UPF2-202ENST00000357604 LUZP4Q9P127 313 aa8.38□□□□□ -1.07
UPF2-202ENST00000357604 TNFSF11O14788 317 aa8.38□□□□□ -1.07
UPF2-202ENST00000357604 DNPH1O43598 174 aa8.38□□□□□ -1.07
UPF2-202ENST00000357604 RPS5P46782 204 aaKnown RBP8.38□□□□□ -1.07
UPF2-202ENST00000357604 INPP5JQ15735 1006 aaPredicted RBP8.38□□□□□ -1.07
UPF2-202ENST00000357604 CES4AQ5XG92 561 aa8.38□□□□□ -1.07
UPF2-202ENST00000357604 CARD17Q5XLA6 110 aa8.38□□□□□ -1.07
UPF2-202ENST00000357604 LCN8Q6JVE9 175 aa8.38□□□□□ -1.07
UPF2-202ENST00000357604 ST6GALNAC3Q8NDV1 305 aa8.38□□□□□ -1.07
UPF2-202ENST00000357604 TMEM52Q8NDY8 209 aa8.38□□□□□ -1.07
UPF2-202ENST00000357604 GPR137Q96N19 417 aa8.38□□□□□ -1.07
UPF2-202ENST00000357604 KAT8Q9H7Z6 458 aaKnown RBP8.38□□□□□ -1.07
UPF2-202ENST00000357604 GPATCH2Q9NW75 528 aa8.38□□□□□ -1.07
UPF2-202ENST00000357604 FBXO9Q9UK97 447 aaPredicted RBP8.38□□□□□ -1.07
UPF2-202ENST00000357604 POU2F1P14859 743 aa8.38□□□□□ -1.07
UPF2-202ENST00000357604 SIRPAP78324 504 aa8.38□□□□□ -1.07
UPF2-202ENST00000357604 SLC38A9Q8NBW4 561 aa8.38□□□□□ -1.07
UPF2-202ENST00000357604 NEIL3Q8TAT5 605 aa8.38□□□□□ -1.07
UPF2-202ENST00000357604 NODALQ96S42 347 aa8.38□□□□□ -1.07
UPF2-202ENST00000357604 ZNF552Q9H707 407 aaPredicted RBP8.38□□□□□ -1.07
UPF2-202ENST00000357604 CALHM2Q9HA72 323 aa8.38□□□□□ -1.07
UPF2-202ENST00000357604 CHST11Q9NPF2 352 aa8.38□□□□□ -1.07
UPF2-202ENST00000357604 RIMS3Q9UJD0 308 aa8.38□□□□□ -1.07
UPF2-202ENST00000357604 RRP15Q9Y3B9 282 aaKnown RBP8.38□□□□□ -1.07
UPF2-202ENST00000357604 GMPPBQ9Y5P6 360 aa8.38□□□□□ -1.07
UPF2-202ENST00000357604 TNFSF12-TNFSF13A0A0A6YY99 330 aa8.38□□□□□ -1.07
UPF2-202ENST00000357604 C11orf98E9PRG8 122 aa8.38□□□□□ -1.07
UPF2-202ENST00000357604 CTSBP07858 339 aa8.38□□□□□ -1.07
UPF2-202ENST00000357604 CCL3P10147 92 aa8.38□□□□□ -1.07
UPF2-202ENST00000357604 ACVR1BP36896 505 aa8.38□□□□□ -1.07
UPF2-202ENST00000357604 TNFSF10P50591 281 aa8.38□□□□□ -1.07
UPF2-202ENST00000357604 MALLQ13021 153 aa8.38□□□□□ -1.07
UPF2-202ENST00000357604 FAM69AQ5T7M9 428 aa8.38□□□□□ -1.07
UPF2-202ENST00000357604 PTCHD4Q6ZW05 846 aa8.38□□□□□ -1.07
UPF2-202ENST00000357604 CCDC36Q8IYA8 594 aa8.38□□□□□ -1.07
UPF2-202ENST00000357604 GALNT11Q8NCW6 608 aa8.38□□□□□ -1.07
UPF2-202ENST00000357604 OR5J2Q8NH18 312 aa8.38□□□□□ -1.07
UPF2-202ENST00000357604 ADAMTS16Q8TE57 1224 aa8.38□□□□□ -1.07
UPF2-202ENST00000357604 HIST1H2AAQ96QV6 131 aa8.38□□□□□ -1.07
UPF2-202ENST00000357604 CHID1Q9BWS9 393 aa8.38□□□□□ -1.07
UPF2-202ENST00000357604 ZNF229Q9UJW7 825 aa8.38□□□□□ -1.07
UPF2-202ENST00000357604 USP22Q9UPT9 525 aa8.38□□□□□ -1.07
UPF2-202ENST00000357604 A0A1B0GTL3 188 aa8.37□□□□□ -1.07
UPF2-202ENST00000357604 NDUFB2O95178 105 aa8.37□□□□□ -1.07
UPF2-202ENST00000357604 HSD11B1P28845 292 aa8.37□□□□□ -1.07
UPF2-202ENST00000357604 POU4F2Q12837 409 aa8.37□□□□□ -1.07
UPF2-202ENST00000357604 BCL2A1Q16548 175 aa8.37□□□□□ -1.07
UPF2-202ENST00000357604 WIPI1Q5MNZ9 446 aaPredicted RBP8.37□□□□□ -1.07
UPF2-202ENST00000357604 H1FNTQ75WM6 255 aaPredicted RBP8.37□□□□□ -1.07
UPF2-202ENST00000357604 GTPBP8Q8N3Z3 284 aaPredicted RBP8.37□□□□□ -1.07
UPF2-202ENST00000357604 OXGR1Q96P68 337 aa8.37□□□□□ -1.07
UPF2-202ENST00000357604 CCL27Q9Y4X3 112 aa8.37□□□□□ -1.07
UPF2-202ENST00000357604 NUMA1Q14980 2115 aa8.37□□□□□ -1.07
UPF2-202ENST00000357604 LOC102725191A0A1B0GVB3 256 aa8.37□□□□□ -1.07
UPF2-202ENST00000357604 MFN2O95140 757 aa8.37□□□□□ -1.07
UPF2-202ENST00000357604 ZFP36L2P47974 494 aaKnown RBP8.37□□□□□ -1.07
UPF2-202ENST00000357604 FOXF1Q12946 379 aa8.37□□□□□ -1.07
UPF2-202ENST00000357604 ZNF321PQ8N8H1 164 aa8.37□□□□□ -1.07
UPF2-202ENST00000357604 ADIPOR1Q96A54 375 aa8.37□□□□□ -1.07
UPF2-202ENST00000357604 C1orf198Q9H425 327 aa8.37□□□□□ -1.07
UPF2-202ENST00000357604 FAM20BO75063 409 aa8.37□□□□□ -1.07
UPF2-202ENST00000357604 PSMG1O95456 288 aa8.37□□□□□ -1.07
UPF2-202ENST00000357604 CRHP06850 196 aa8.37□□□□□ -1.07
UPF2-202ENST00000357604 ADH7P40394 386 aa8.37□□□□□ -1.07
UPF2-202ENST00000357604 ZNF117Q03924 483 aa8.37□□□□□ -1.07
UPF2-202ENST00000357604 CAMK2BQ13554 666 aa8.37□□□□□ -1.07
UPF2-202ENST00000357604 RCN1Q15293 331 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms