RNA–Protein interactions for RNA: ENST00000355766.5

VPS13A-201, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 3

Gene VPS13A, Length 753 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-201ENST00000355766 I3L1I5 382 aaPredicted RBP6.36□□□□□ -1.39
VPS13A-201ENST00000355766 SGK494L7N484 410 aa6.36□□□□□ -1.39
VPS13A-201ENST00000355766 GNGT2O14610 69 aa6.36□□□□□ -1.39
VPS13A-201ENST00000355766 FMO6PO60774 539 aa6.36□□□□□ -1.39
VPS13A-201ENST00000355766 SLC19A2O60779 497 aa6.36□□□□□ -1.39
VPS13A-201ENST00000355766 B4GALT2O60909 372 aa6.36□□□□□ -1.39
VPS13A-201ENST00000355766 GCM2O75603 506 aaPredicted RBP6.36□□□□□ -1.39
VPS13A-201ENST00000355766 MFN2O95140 757 aa6.36□□□□□ -1.39
VPS13A-201ENST00000355766 OXSR1O95747 527 aaPredicted RBP6.36□□□□□ -1.39
VPS13A-201ENST00000355766 BCHEP06276 602 aa6.36□□□□□ -1.39
VPS13A-201ENST00000355766 NR2F1P10589 423 aa6.36□□□□□ -1.39
VPS13A-201ENST00000355766 ZNF23P17027 643 aa6.36□□□□□ -1.39
VPS13A-201ENST00000355766 EFNA1P20827 205 aaPredicted RBP6.36□□□□□ -1.39
VPS13A-201ENST00000355766 MMP11P24347 488 aa6.36□□□□□ -1.39
VPS13A-201ENST00000355766 FEN1P39748 380 aaKnown RBP6.36□□□□□ -1.39
VPS13A-201ENST00000355766 XCR1P46094 333 aa6.36□□□□□ -1.39
VPS13A-201ENST00000355766 KCNJ5P48544 419 aa6.36□□□□□ -1.39
VPS13A-201ENST00000355766 ERFP50548 548 aa6.36□□□□□ -1.39
VPS13A-201ENST00000355766 HMGA2P52926 109 aa6.36□□□□□ -1.39
VPS13A-201ENST00000355766 RAD23AP54725 363 aa6.36□□□□□ -1.39
VPS13A-201ENST00000355766 PSMD4P55036 377 aaKnown RBP6.36□□□□□ -1.39
VPS13A-201ENST00000355766 CASP6P55212 293 aa6.36□□□□□ -1.39
VPS13A-201ENST00000355766 DCAF7P61962 342 aa6.36□□□□□ -1.39
VPS13A-201ENST00000355766 RBPJQ06330 500 aa6.36□□□□□ -1.39
VPS13A-201ENST00000355766 FUT7Q11130 342 aa6.36□□□□□ -1.39
VPS13A-201ENST00000355766 LASP1Q14847 261 aaKnown RBP6.36□□□□□ -1.39
VPS13A-201ENST00000355766 ZNHIT3Q15649 155 aaPredicted RBP6.36□□□□□ -1.39
VPS13A-201ENST00000355766 DEFB110Q30KQ9 67 aa6.36□□□□□ -1.39
VPS13A-201ENST00000355766 ARHGAP11BQ3KRB8 267 aa6.36□□□□□ -1.39
VPS13A-201ENST00000355766 IQCCQ4KMZ1 466 aa6.36□□□□□ -1.39
VPS13A-201ENST00000355766 RNF220Q5VTB9 566 aa6.36□□□□□ -1.39
VPS13A-201ENST00000355766 C1orf189Q5VU69 101 aa6.36□□□□□ -1.39
VPS13A-201ENST00000355766 TTC23Q5W5X9 447 aa6.36□□□□□ -1.39
VPS13A-201ENST00000355766 FAAH2Q6GMR7 532 aa6.36□□□□□ -1.39
VPS13A-201ENST00000355766 TNFAIP8L2Q6P589 184 aaPredicted RBP6.36□□□□□ -1.39
VPS13A-201ENST00000355766 ISLR2Q6UXK2 745 aa6.36□□□□□ -1.39
VPS13A-201ENST00000355766 MEX3BQ6ZN04 569 aaKnown RBP6.36□□□□□ -1.39
VPS13A-201ENST00000355766 CYP4Z1Q86W10 505 aa6.36□□□□□ -1.39
VPS13A-201ENST00000355766 CARM1Q86X55 608 aa6.36□□□□□ -1.39
VPS13A-201ENST00000355766 CHERPQ8IWX8 916 aaKnown RBP6.36□□□□□ -1.39
VPS13A-201ENST00000355766 CMIPQ8IY22 773 aa6.36□□□□□ -1.39
VPS13A-201ENST00000355766 PARP8Q8N3A8 854 aa6.36□□□□□ -1.39
VPS13A-201ENST00000355766 FAM86B1Q8N7N1 296 aa6.36□□□□□ -1.39
VPS13A-201ENST00000355766 PIK3C3Q8NEB9 887 aa6.36□□□□□ -1.39
VPS13A-201ENST00000355766 C17orf47Q8NEP4 570 aa6.36□□□□□ -1.39
VPS13A-201ENST00000355766 OR7G2Q8NG99 324 aa6.36□□□□□ -1.39
VPS13A-201ENST00000355766 OR1N1Q8NGS0 311 aa6.36□□□□□ -1.39
VPS13A-201ENST00000355766 OR9A4Q8NGU2 314 aa6.36□□□□□ -1.39
VPS13A-201ENST00000355766 OR51Q1Q8NH59 317 aa6.36□□□□□ -1.39
VPS13A-201ENST00000355766 OR14A16Q8NHC5 309 aa6.36□□□□□ -1.39
VPS13A-201ENST00000355766 ADAMTS15Q8TE58 950 aa6.36□□□□□ -1.39
VPS13A-201ENST00000355766 MAL2Q969L2 176 aa6.36□□□□□ -1.39
VPS13A-201ENST00000355766 TMBIM1Q969X1 311 aa6.36□□□□□ -1.39
VPS13A-201ENST00000355766 ANKRD9Q96BM1 317 aaPredicted RBP6.36□□□□□ -1.39
VPS13A-201ENST00000355766 RBM18Q96H35 190 aaKnown RBP6.36□□□□□ -1.39
VPS13A-201ENST00000355766 AJUBAQ96IF1 538 aa6.36□□□□□ -1.39
VPS13A-201ENST00000355766 ZNF354BQ96LW1 612 aa6.36□□□□□ -1.39
VPS13A-201ENST00000355766 OR7D2Q96RA2 312 aa6.36□□□□□ -1.39
VPS13A-201ENST00000355766 ZNF300Q96RE9 604 aaPredicted RBP6.36□□□□□ -1.39
VPS13A-201ENST00000355766 PIP5K1AQ99755 562 aa6.36□□□□□ -1.39
VPS13A-201ENST00000355766 CIB1Q99828 191 aa6.36□□□□□ -1.39
VPS13A-201ENST00000355766 FOXC2Q99958 501 aa6.36□□□□□ -1.39
VPS13A-201ENST00000355766 ADI1Q9BV57 179 aa6.36□□□□□ -1.39
VPS13A-201ENST00000355766 PINK1Q9BXM7 581 aa6.36□□□□□ -1.39
VPS13A-201ENST00000355766 YTHDF1Q9BYJ9 559 aaKnown RBP6.36□□□□□ -1.39
VPS13A-201ENST00000355766 LHPPQ9H008 270 aa6.36□□□□□ -1.39
VPS13A-201ENST00000355766 SLC26A1Q9H2B4 701 aa6.36□□□□□ -1.39
VPS13A-201ENST00000355766 OR51I1Q9H343 314 aa6.36□□□□□ -1.39
VPS13A-201ENST00000355766 SERHL2Q9H4I8 314 aa6.36□□□□□ -1.39
VPS13A-201ENST00000355766 PIF1Q9H611 641 aa6.36□□□□□ -1.39
VPS13A-201ENST00000355766 ARMC7Q9H6L4 198 aa6.36□□□□□ -1.39
VPS13A-201ENST00000355766 COQ10BQ9H8M1 238 aa6.36□□□□□ -1.39
VPS13A-201ENST00000355766 CXorf21Q9HAI6 301 aa6.36□□□□□ -1.39
VPS13A-201ENST00000355766 PRTFDC1Q9NRG1 225 aa6.36□□□□□ -1.39
VPS13A-201ENST00000355766 IRAK4Q9NWZ3 460 aa6.36□□□□□ -1.39
VPS13A-201ENST00000355766 KLHL28Q9NXS3 571 aa6.36□□□□□ -1.39
VPS13A-201ENST00000355766 MAT2BQ9NZL9 334 aa6.36□□□□□ -1.39
VPS13A-201ENST00000355766 NDUFAF4Q9P032 175 aa6.36□□□□□ -1.39
VPS13A-201ENST00000355766 ABI3Q9P2A4 366 aa6.36□□□□□ -1.39
VPS13A-201ENST00000355766 SEC14L3Q9UDX4 400 aa6.36□□□□□ -1.39
VPS13A-201ENST00000355766 PRODH2Q9UF12 536 aa6.36□□□□□ -1.39
VPS13A-201ENST00000355766 NXT1Q9UKK6 140 aaKnown RBP6.36□□□□□ -1.39
VPS13A-201ENST00000355766 FAM32AQ9Y421 112 aaKnown RBP6.36□□□□□ -1.39
VPS13A-201ENST00000355766 ORC6Q9Y5N6 252 aa6.36□□□□□ -1.39
VPS13A-201ENST00000355766 AP4B1Q9Y6B7 739 aa6.36□□□□□ -1.39
VPS13A-201ENST00000355766 ENPP4Q9Y6X5 453 aa6.36□□□□□ -1.39
VPS13A-201ENST00000355766 HSPE1-MOB4S4R3N1 261 aa6.36□□□□□ -1.39
VPS13A-201ENST00000355766 TRAV17A0A0B4J275 112 aa6.35□□□□□ -1.39
VPS13A-201ENST00000355766 A0A1W2PRQ8 180 aa6.35□□□□□ -1.39
VPS13A-201ENST00000355766 MAGEA13PA6NCF6 341 aa6.35□□□□□ -1.39
VPS13A-201ENST00000355766 ZNF860A6NHJ4 632 aa6.35□□□□□ -1.39
VPS13A-201ENST00000355766 OR6C76A6NM76 312 aa6.35□□□□□ -1.39
VPS13A-201ENST00000355766 M0QX08 132 aa6.35□□□□□ -1.39
VPS13A-201ENST00000355766 SOCS6O14544 535 aa6.35□□□□□ -1.39
VPS13A-201ENST00000355766 EI24O14681 340 aa6.35□□□□□ -1.39
VPS13A-201ENST00000355766 HCRTR1O43613 425 aa6.35□□□□□ -1.39
VPS13A-201ENST00000355766 KIAA0513O60268 411 aa6.35□□□□□ -1.39
VPS13A-201ENST00000355766 OR10H2O60403 315 aa6.35□□□□□ -1.39
VPS13A-201ENST00000355766 TPST1O60507 370 aa6.35□□□□□ -1.39
VPS13A-201ENST00000355766 E2F6O75461 281 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms