RNA–Protein interactions for RNA: ENST00000354901.8

SMG6-202, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best) BASIC

Gene SMG6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-202ENST00000354901 MEIKINA0A087WXM9 373 aa8.71□□□□□ -1.02
SMG6-202ENST00000354901 A8MXK9 166 aa8.71□□□□□ -1.02
SMG6-202ENST00000354901 ERI3O43414 337 aaKnown RBP8.71□□□□□ -1.02
SMG6-202ENST00000354901 CRYBA1P05813 215 aa8.71□□□□□ -1.02
SMG6-202ENST00000354901 NFYAP23511 347 aaPredicted RBP8.71□□□□□ -1.02
SMG6-202ENST00000354901 PPP2R1BP30154 601 aa8.71□□□□□ -1.02
SMG6-202ENST00000354901 AKR1C3P42330 323 aa8.71□□□□□ -1.02
SMG6-202ENST00000354901 PTGFRP43088 359 aa8.71□□□□□ -1.02
SMG6-202ENST00000354901 CASP6P55212 293 aa8.71□□□□□ -1.02
SMG6-202ENST00000354901 OR10A3P58181 314 aa8.71□□□□□ -1.02
SMG6-202ENST00000354901 BTG1P62324 171 aa8.71□□□□□ -1.02
SMG6-202ENST00000354901 ILKQ13418 452 aa8.71□□□□□ -1.02
SMG6-202ENST00000354901 KLHL26Q53HC5 615 aa8.71□□□□□ -1.02
SMG6-202ENST00000354901 KIAA1161Q6NSJ0 714 aa8.71□□□□□ -1.02
SMG6-202ENST00000354901 IKBIPQ70UQ0 350 aa8.71□□□□□ -1.02
SMG6-202ENST00000354901 ERN2Q76MJ5 926 aaKnown RBP8.71□□□□□ -1.02
SMG6-202ENST00000354901 LRRTM4Q86VH4 590 aa8.71□□□□□ -1.02
SMG6-202ENST00000354901 FBXO15Q8NCQ5 510 aaPredicted RBP8.71□□□□□ -1.02
SMG6-202ENST00000354901 OR1M1Q8NGA1 313 aa8.71□□□□□ -1.02
SMG6-202ENST00000354901 OR8J1Q8NGP2 316 aa8.71□□□□□ -1.02
SMG6-202ENST00000354901 SETD7Q8WTS6 366 aaKnown RBP8.71□□□□□ -1.02
SMG6-202ENST00000354901 SUSD6Q92537 303 aa8.71□□□□□ -1.02
SMG6-202ENST00000354901 COL26A1Q96A83 441 aa8.71□□□□□ -1.02
SMG6-202ENST00000354901 KIAA1143Q96AT1 154 aaPredicted RBP8.71□□□□□ -1.02
SMG6-202ENST00000354901 ARSGQ96EG1 525 aa8.71□□□□□ -1.02
SMG6-202ENST00000354901 MNTQ99583 582 aa8.71□□□□□ -1.02
SMG6-202ENST00000354901 FAM83CQ9BQN1 747 aa8.71□□□□□ -1.02
SMG6-202ENST00000354901 TGIF2Q9GZN2 237 aa8.71□□□□□ -1.02
SMG6-202ENST00000354901 NEUROD4Q9HD90 331 aa8.71□□□□□ -1.02
SMG6-202ENST00000354901 NTMQ9P121 344 aa8.71□□□□□ -1.02
SMG6-202ENST00000354901 KCND3Q9UK17 655 aa8.71□□□□□ -1.02
SMG6-202ENST00000354901 CSNK1G3Q9Y6M4 447 aa8.71□□□□□ -1.02
SMG6-202ENST00000354901 CPSF4LA6NMK7 179 aaKnown RBP8.71□□□□□ -1.02
SMG6-202ENST00000354901 FAAHO00519 579 aa8.71□□□□□ -1.02
SMG6-202ENST00000354901 ADH1CP00326 375 aa8.71□□□□□ -1.02
SMG6-202ENST00000354901 LINC00271P0C7V0 271 aa8.71□□□□□ -1.02
SMG6-202ENST00000354901 P2RY2P41231 377 aa8.71□□□□□ -1.02
SMG6-202ENST00000354901 SNTB2Q13425 540 aaKnown RBP8.71□□□□□ -1.02
SMG6-202ENST00000354901 GK2Q14410 553 aaPredicted RBP8.71□□□□□ -1.02
SMG6-202ENST00000354901 HLXQ14774 488 aaPredicted RBP8.71□□□□□ -1.02
SMG6-202ENST00000354901 TSC22D1Q15714 1073 aa8.71□□□□□ -1.02
SMG6-202ENST00000354901 FAM46CQ5VWP2 391 aa8.71□□□□□ -1.02
SMG6-202ENST00000354901 NANOGP1Q8N7R0 232 aa8.71□□□□□ -1.02
SMG6-202ENST00000354901 LINC01555Q8NAE3 123 aa8.71□□□□□ -1.02
SMG6-202ENST00000354901 TRMT10AQ8TBZ6 339 aaKnown RBP8.71□□□□□ -1.02
SMG6-202ENST00000354901 APOBEC4Q8WW27 367 aaKnown RBP8.71□□□□□ -1.02
SMG6-202ENST00000354901 RGMAQ96B86 450 aa8.71□□□□□ -1.02
SMG6-202ENST00000354901 C3orf49Q96BT1 292 aa8.71□□□□□ -1.02
SMG6-202ENST00000354901 ZNF514Q96K75 400 aaPredicted RBP8.71□□□□□ -1.02
SMG6-202ENST00000354901 ABHD1Q96SE0 405 aa8.71□□□□□ -1.02
SMG6-202ENST00000354901 SARGQ9BW04 601 aa8.71□□□□□ -1.02
SMG6-202ENST00000354901 TTTY10Q9BZA0 68 aa8.71□□□□□ -1.02
SMG6-202ENST00000354901 EPHX3Q9H6B9 360 aa8.71□□□□□ -1.02
SMG6-202ENST00000354901 SYNDIG1Q9H7V2 258 aa8.71□□□□□ -1.02
SMG6-202ENST00000354901 P2RX2Q9UBL9 471 aa8.71□□□□□ -1.02
SMG6-202ENST00000354901 A4GNTQ9UNA3 340 aa8.71□□□□□ -1.02
SMG6-202ENST00000354901 NTNG1Q9Y2I2 539 aa8.71□□□□□ -1.02
SMG6-202ENST00000354901 AP1M2Q9Y6Q5 423 aa8.71□□□□□ -1.02
SMG6-202ENST00000354901 CHD9Q3L8U1 2897 aa8.71□□□□□ -1.02
SMG6-202ENST00000354901 HMGN2P05204 90 aaKnown RBP8.7□□□□□ -1.02
SMG6-202ENST00000354901 RB1P06400 928 aa8.7□□□□□ -1.02
SMG6-202ENST00000354901 ATXN8OSP0DMR3 200 aa8.7□□□□□ -1.02
SMG6-202ENST00000354901 FOSL2P15408 326 aa8.7□□□□□ -1.02
SMG6-202ENST00000354901 ACHEP22303 614 aa8.7□□□□□ -1.02
SMG6-202ENST00000354901 CCINQ13939 588 aa8.7□□□□□ -1.02
SMG6-202ENST00000354901 RBM39Q14498 530 aaKnown RBP8.7□□□□□ -1.02
SMG6-202ENST00000354901 ELAVL3Q14576 367 aaKnown RBP8.7□□□□□ -1.02
SMG6-202ENST00000354901 ZNF793Q6ZN11 406 aa8.7□□□□□ -1.02
SMG6-202ENST00000354901 UBE3DQ7Z6J8 389 aa8.7□□□□□ -1.02
SMG6-202ENST00000354901 SYT9Q86SS6 491 aa8.7□□□□□ -1.02
SMG6-202ENST00000354901 KCT2Q8NC54 265 aa8.7□□□□□ -1.02
SMG6-202ENST00000354901 SLC25A19Q9HC21 320 aa8.7□□□□□ -1.02
SMG6-202ENST00000354901 A4GALTQ9NPC4 353 aa8.7□□□□□ -1.02
SMG6-202ENST00000354901 TMEM138Q9NPI0 162 aa8.7□□□□□ -1.02
SMG6-202ENST00000354901 MBNL1Q9NR56 388 aaKnown RBP8.7□□□□□ -1.02
SMG6-202ENST00000354901 NDRG3Q9UGV2 375 aa8.7□□□□□ -1.02
SMG6-202ENST00000354901 ICKQ9UPZ9 632 aa8.7□□□□□ -1.02
SMG6-202ENST00000354901 RASD1Q9Y272 281 aa8.7□□□□□ -1.02
SMG6-202ENST00000354901 TRBV23OR9-2A0A075B6M9 112 aa8.7□□□□□ -1.02
SMG6-202ENST00000354901 EIF1BO60739 113 aaKnown RBP8.7□□□□□ -1.02
SMG6-202ENST00000354901 FARS2O95363 451 aaKnown RBP8.7□□□□□ -1.02
SMG6-202ENST00000354901 SERPINA3P01011 423 aa8.7□□□□□ -1.02
SMG6-202ENST00000354901 CHRM4P08173 479 aa8.7□□□□□ -1.02
SMG6-202ENST00000354901 EIF1P41567 113 aaKnown RBP8.7□□□□□ -1.02
SMG6-202ENST00000354901 GIPRP48546 466 aa8.7□□□□□ -1.02
SMG6-202ENST00000354901 DUSP2Q05923 314 aa8.7□□□□□ -1.02
SMG6-202ENST00000354901 TRAM2Q15035 370 aa8.7□□□□□ -1.02
SMG6-202ENST00000354901 LRRC37A5PQ49AS3 106 aa8.7□□□□□ -1.02
SMG6-202ENST00000354901 PABPC1L2AQ5JQF8 200 aa8.7□□□□□ -1.02
SMG6-202ENST00000354901 C19orf48Q6RUI8 117 aa8.7□□□□□ -1.02
SMG6-202ENST00000354901 SSX9Q7RTT3 188 aa8.7□□□□□ -1.02
SMG6-202ENST00000354901 OR5T2Q8NGG2 359 aa8.7□□□□□ -1.02
SMG6-202ENST00000354901 OR52B4Q8NGK2 314 aa8.7□□□□□ -1.02
SMG6-202ENST00000354901 OR52I1Q8NGK6 324 aa8.7□□□□□ -1.02
SMG6-202ENST00000354901 KAT2AQ92830 837 aa8.7□□□□□ -1.02
SMG6-202ENST00000354901 ZC3H10Q96K80 434 aaKnown RBP8.7□□□□□ -1.02
SMG6-202ENST00000354901 GAL3ST1Q99999 423 aa8.7□□□□□ -1.02
SMG6-202ENST00000354901 BTBD1Q9H0C5 482 aa8.7□□□□□ -1.02
SMG6-202ENST00000354901 ASF1BQ9NVP2 202 aa8.7□□□□□ -1.02
SMG6-202ENST00000354901 RPS6KB2Q9UBS0 482 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms