RNA–Protein interactions for RNA: ENST00000353578.8

COL6A3-203, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 5 BASIC

Gene COL6A3, Length 9,963 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-203ENST00000353578 DNAJC13O75165 2243 aa11.86□□□□□ -0.51
COL6A3-203ENST00000353578 TRA2BP62995 288 aaKnown RBP11.86□□□□□ -0.51
COL6A3-203ENST00000353578 CES4AQ5XG92 561 aa11.86□□□□□ -0.51
COL6A3-203ENST00000353578 TMPPEQ6ZT21 453 aa11.86□□□□□ -0.51
COL6A3-203ENST00000353578 OR6C68A6NDL8 312 aa11.86□□□□□ -0.51
COL6A3-203ENST00000353578 MRPS34P82930 218 aaKnown RBP11.86□□□□□ -0.51
COL6A3-203ENST00000353578 HSF1Q00613 529 aa11.86□□□□□ -0.51
COL6A3-203ENST00000353578 NXPE4Q6UWF7 544 aa11.86□□□□□ -0.51
COL6A3-203ENST00000353578 GALNT10Q86SR1 603 aa11.86□□□□□ -0.51
COL6A3-203ENST00000353578 WDR5BQ86VZ2 330 aa11.86□□□□□ -0.51
COL6A3-203ENST00000353578 MS4A4EQ96PG1 132 aa11.86□□□□□ -0.51
COL6A3-203ENST00000353578 C19orf25Q9UFG5 118 aaPredicted RBP11.86□□□□□ -0.51
COL6A3-203ENST00000353578 SMAD9O15198 467 aaKnown RBP11.86□□□□□ -0.51
COL6A3-203ENST00000353578 RAB11AP62491 216 aa11.86□□□□□ -0.51
COL6A3-203ENST00000353578 PLP2Q04941 152 aa11.86□□□□□ -0.51
COL6A3-203ENST00000353578 FCRLBQ6BAA4 426 aa11.86□□□□□ -0.51
COL6A3-203ENST00000353578 WDR73Q6P4I2 378 aa11.86□□□□□ -0.51
COL6A3-203ENST00000353578 GPR150Q8NGU9 434 aa11.86□□□□□ -0.51
COL6A3-203ENST00000353578 ENKD1Q9H0I2 346 aa11.86□□□□□ -0.51
COL6A3-203ENST00000353578 SMDT1Q9H4I9 107 aa11.86□□□□□ -0.51
COL6A3-203ENST00000353578 KCTD3Q9Y597 815 aa11.86□□□□□ -0.51
COL6A3-203ENST00000353578 HOXB1P14653 301 aaPredicted RBP11.86□□□□□ -0.51
COL6A3-203ENST00000353578 CBLP22681 906 aa11.86□□□□□ -0.51
COL6A3-203ENST00000353578 ILKQ13418 452 aa11.86□□□□□ -0.51
COL6A3-203ENST00000353578 TTLL10Q6ZVT0 673 aa11.86□□□□□ -0.51
COL6A3-203ENST00000353578 LRRC25Q8N386 305 aaPredicted RBP11.86□□□□□ -0.51
COL6A3-203ENST00000353578 CELF2-AS1Q8N7Q2 184 aa11.86□□□□□ -0.51
COL6A3-203ENST00000353578 ISL2Q96A47 359 aa11.86□□□□□ -0.51
COL6A3-203ENST00000353578 ADAM29Q9UKF5 820 aa11.86□□□□□ -0.51
COL6A3-203ENST00000353578 NDRG2Q9UN36 371 aaKnown RBP11.86□□□□□ -0.51
COL6A3-203ENST00000353578 G3V2L1 256 aa11.86□□□□□ -0.51
COL6A3-203ENST00000353578 HABP2Q14520 560 aaPredicted RBP11.86□□□□□ -0.51
COL6A3-203ENST00000353578 RGL4Q8IZJ4 473 aa11.86□□□□□ -0.51
COL6A3-203ENST00000353578 KCNG3Q8TAE7 436 aa11.86□□□□□ -0.51
COL6A3-203ENST00000353578 SLC35B4Q969S0 331 aa11.86□□□□□ -0.51
COL6A3-203ENST00000353578 P2RX7Q99572 595 aaKnown RBP11.86□□□□□ -0.51
COL6A3-203ENST00000353578 TMEM131LA2VDJ0 1609 aa11.85□□□□□ -0.51
COL6A3-203ENST00000353578 TBC1D3BA6NDS4 549 aa11.85□□□□□ -0.51
COL6A3-203ENST00000353578 ACSM4P0C7M7 580 aa11.85□□□□□ -0.51
COL6A3-203ENST00000353578 TMEM115Q12893 351 aaPredicted RBP11.85□□□□□ -0.51
COL6A3-203ENST00000353578 VGLL2Q8N8G2 317 aa11.85□□□□□ -0.51
COL6A3-203ENST00000353578 TMEM102Q8N9M5 508 aaPredicted RBP11.85□□□□□ -0.51
COL6A3-203ENST00000353578 TVP23CQ96ET8 276 aa11.85□□□□□ -0.51
COL6A3-203ENST00000353578 UBL7Q96S82 380 aaPredicted RBP11.85□□□□□ -0.51
COL6A3-203ENST00000353578 SIX6O95475 246 aa11.85□□□□□ -0.51
COL6A3-203ENST00000353578 RRASP10301 218 aa11.85□□□□□ -0.51
COL6A3-203ENST00000353578 EBPQ15125 230 aaKnown RBP11.85□□□□□ -0.51
COL6A3-203ENST00000353578 KDM4DQ6B0I6 523 aa11.85□□□□□ -0.51
COL6A3-203ENST00000353578 ZNF791Q3KP31 576 aaPredicted RBP11.85□□□□□ -0.51
COL6A3-203ENST00000353578 PRSS35Q8N3Z0 413 aa11.85□□□□□ -0.51
COL6A3-203ENST00000353578 OR9A1PQ8NGU1 263 aa11.85□□□□□ -0.51
COL6A3-203ENST00000353578 CLMPQ9H6B4 373 aa11.85□□□□□ -0.51
COL6A3-203ENST00000353578 PLEKHJ1Q9NW61 149 aa11.85□□□□□ -0.51
COL6A3-203ENST00000353578 FUT4P22083 530 aa11.85□□□□□ -0.51
COL6A3-203ENST00000353578 OR1E2P47887 323 aa11.85□□□□□ -0.51
COL6A3-203ENST00000353578 DAP3P51398 398 aaKnown RBP11.85□□□□□ -0.51
COL6A3-203ENST00000353578 KIAA1024LP59773 190 aa11.85□□□□□ -0.51
COL6A3-203ENST00000353578 ADGRA1Q86SQ6 560 aa11.85□□□□□ -0.51
COL6A3-203ENST00000353578 BPIFB2Q8N4F0 458 aa11.85□□□□□ -0.51
COL6A3-203ENST00000353578 OR52P1PQ8NH57 321 aa11.85□□□□□ -0.51
COL6A3-203ENST00000353578 ECHDC3Q96DC8 303 aa11.85□□□□□ -0.51
COL6A3-203ENST00000353578 SDK1Q7Z5N4 2213 aa11.85□□□□□ -0.51
COL6A3-203ENST00000353578 COL5A2P05997 1499 aaPredicted RBP11.85□□□□□ -0.51
COL6A3-203ENST00000353578 SOX2P48431 317 aa11.85□□□□□ -0.51
COL6A3-203ENST00000353578 C5orf46Q6UWT4 87 aa11.85□□□□□ -0.51
COL6A3-203ENST00000353578 SIAH3Q8IW03 269 aa11.85□□□□□ -0.51
COL6A3-203ENST00000353578 SPICQ8N5J4 248 aa11.85□□□□□ -0.51
COL6A3-203ENST00000353578 OR51Q1Q8NH59 317 aa11.85□□□□□ -0.51
COL6A3-203ENST00000353578 PKIBQ9C010 78 aa11.85□□□□□ -0.51
COL6A3-203ENST00000353578 NARFLQ9H6Q4 476 aa11.85□□□□□ -0.51
COL6A3-203ENST00000353578 ATAD5Q96QE3 1844 aa11.85□□□□□ -0.51
COL6A3-203ENST00000353578 PDGFBP01127 241 aaPredicted RBP11.85□□□□□ -0.51
COL6A3-203ENST00000353578 OR2T7P0C7T2 308 aa11.85□□□□□ -0.51
COL6A3-203ENST00000353578 SGSHP51688 502 aa11.85□□□□□ -0.51
COL6A3-203ENST00000353578 CDONQ4KMG0 1287 aa11.85□□□□□ -0.51
COL6A3-203ENST00000353578 OR2T27Q8NH04 317 aa11.85□□□□□ -0.51
COL6A3-203ENST00000353578 ZNF768Q9H5H4 540 aaKnown RBP11.85□□□□□ -0.51
COL6A3-203ENST00000353578 SLC6A20Q9NP91 592 aa11.85□□□□□ -0.51
COL6A3-203ENST00000353578 HMSDA8MTL9 139 aa11.85□□□□□ -0.51
COL6A3-203ENST00000353578 PTHLHP12272 177 aa11.85□□□□□ -0.51
COL6A3-203ENST00000353578 G0S2P27469 103 aa11.85□□□□□ -0.51
COL6A3-203ENST00000353578 PRAMEF8Q5VWM4 474 aa11.85□□□□□ -0.51
COL6A3-203ENST00000353578 PRAMEF7Q5VXH5 474 aa11.85□□□□□ -0.51
COL6A3-203ENST00000353578 CNTN4Q8IWV2 1026 aa11.85□□□□□ -0.51
COL6A3-203ENST00000353578 ZNF395Q9H8N7 513 aaPredicted RBP11.85□□□□□ -0.51
COL6A3-203ENST00000353578 KDM3BQ7LBC6 1761 aa11.84□□□□□ -0.51
COL6A3-203ENST00000353578 TRPM6Q9BX84 2022 aa11.84□□□□□ -0.51
COL6A3-203ENST00000353578 SMIM30A4D0T7 59 aa11.84□□□□□ -0.51
COL6A3-203ENST00000353578 CTDSP2O14595 271 aa11.84□□□□□ -0.51
COL6A3-203ENST00000353578 MSCO60682 206 aa11.84□□□□□ -0.51
COL6A3-203ENST00000353578 SLC6A8P48029 635 aa11.84□□□□□ -0.51
COL6A3-203ENST00000353578 SLC11A1P49279 550 aa11.84□□□□□ -0.51
COL6A3-203ENST00000353578 AMZ1Q400G9 498 aa11.84□□□□□ -0.51
COL6A3-203ENST00000353578 ADGRE4PQ86SQ3 457 aa11.84□□□□□ -0.51
COL6A3-203ENST00000353578 GPR119Q8TDV5 335 aa11.84□□□□□ -0.51
COL6A3-203ENST00000353578 ARHGDIGQ99819 225 aa11.84□□□□□ -0.51
COL6A3-203ENST00000353578 ACOXLQ9NUZ1 547 aa11.84□□□□□ -0.51
COL6A3-203ENST00000353578 REV1Q9UBZ9 1251 aa11.84□□□□□ -0.51
COL6A3-203ENST00000353578 G3V3Q6 166 aa11.84□□□□□ -0.51
COL6A3-203ENST00000353578 LGALS8O00214 317 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms