RNA–Protein interactions for RNA: ENST00000353317.9

TRIM55-204, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 2,624 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-204ENST00000353317 DIO2Q92813 273 aa7.94□□□□□ -1.14
TRIM55-204ENST00000353317 RFKQ969G6 155 aa7.94□□□□□ -1.14
TRIM55-204ENST00000353317 OTULINQ96BN8 352 aa7.94□□□□□ -1.14
TRIM55-204ENST00000353317 MED30Q96HR3 178 aa7.94□□□□□ -1.14
TRIM55-204ENST00000353317 TRAF4Q9BUZ4 470 aaPredicted RBP7.94□□□□□ -1.14
TRIM55-204ENST00000353317 SPRTNQ9H040 489 aaPredicted RBP7.94□□□□□ -1.14
TRIM55-204ENST00000353317 GAREM1Q9H706 876 aa7.94□□□□□ -1.14
TRIM55-204ENST00000353317 IL20Q9NYY1 176 aa7.94□□□□□ -1.14
TRIM55-204ENST00000353317 EXTL2Q9UBQ6 330 aa7.94□□□□□ -1.14
TRIM55-204ENST00000353317 SLC23A1Q9UHI7 598 aa7.94□□□□□ -1.14
TRIM55-204ENST00000353317 DAPP1Q9UN19 280 aa7.94□□□□□ -1.14
TRIM55-204ENST00000353317 EXOGQ9Y2C4 368 aaKnown RBP7.94□□□□□ -1.14
TRIM55-204ENST00000353317 EP300Q09472 2414 aaPredicted RBP7.94□□□□□ -1.14
TRIM55-204ENST00000353317 FAM86C2PA6NEL3 165 aa7.94□□□□□ -1.14
TRIM55-204ENST00000353317 FAM183AA6NL82 134 aa7.94□□□□□ -1.14
TRIM55-204ENST00000353317 C12orf71A8MTZ7 269 aa7.94□□□□□ -1.14
TRIM55-204ENST00000353317 GTPBP1O00178 669 aaKnown RBP7.94□□□□□ -1.14
TRIM55-204ENST00000353317 CHST10O43529 356 aa7.94□□□□□ -1.14
TRIM55-204ENST00000353317 HYAL3O43820 417 aaPredicted RBP7.94□□□□□ -1.14
TRIM55-204ENST00000353317 CRYZL1O95825 349 aa7.94□□□□□ -1.14
TRIM55-204ENST00000353317 IFI30P13284 250 aa7.94□□□□□ -1.14
TRIM55-204ENST00000353317 PTNP21246 168 aa7.94□□□□□ -1.14
TRIM55-204ENST00000353317 CFL1P23528 166 aaKnown RBP7.94□□□□□ -1.14
TRIM55-204ENST00000353317 ATP6V1E1P36543 226 aa7.94□□□□□ -1.14
TRIM55-204ENST00000353317 IFNGR2P38484 337 aa7.94□□□□□ -1.14
TRIM55-204ENST00000353317 GPR4P46093 362 aa7.94□□□□□ -1.14
TRIM55-204ENST00000353317 TRA2BP62995 288 aaKnown RBP7.94□□□□□ -1.14
TRIM55-204ENST00000353317 RGS1Q08116 209 aa7.94□□□□□ -1.14
TRIM55-204ENST00000353317 TRAM2Q15035 370 aa7.94□□□□□ -1.14
TRIM55-204ENST00000353317 PRTGQ2VWP7 1150 aa7.94□□□□□ -1.14
TRIM55-204ENST00000353317 IDNKQ5T6J7 187 aa7.94□□□□□ -1.14
TRIM55-204ENST00000353317 SLC48A1Q6P1K1 146 aa7.94□□□□□ -1.14
TRIM55-204ENST00000353317 MZT2AQ6P582 158 aa7.94□□□□□ -1.14
TRIM55-204ENST00000353317 ZNF322Q6U7Q0 402 aaPredicted RBP7.94□□□□□ -1.14
TRIM55-204ENST00000353317 TMEM107Q6UX40 140 aa7.94□□□□□ -1.14
TRIM55-204ENST00000353317 ASB18Q6ZVZ8 466 aa7.94□□□□□ -1.14
TRIM55-204ENST00000353317 RRM2BQ7LG56 351 aa7.94□□□□□ -1.14
TRIM55-204ENST00000353317 TMEM151BQ8IW70 566 aa7.94□□□□□ -1.14
TRIM55-204ENST00000353317 ELMOD2Q8IZ81 293 aa7.94□□□□□ -1.14
TRIM55-204ENST00000353317 SDR16C5Q8N3Y7 309 aa7.94□□□□□ -1.14
TRIM55-204ENST00000353317 BMPERQ8N8U9 685 aa7.94□□□□□ -1.14
TRIM55-204ENST00000353317 ZBTB44Q8NCP5 570 aa7.94□□□□□ -1.14
TRIM55-204ENST00000353317 AKAP1Q92667 903 aaKnown RBP eCLIP7.94□□□□□ -1.14
TRIM55-204ENST00000353317 CREB3L1Q96BA8 519 aa7.94□□□□□ -1.14
TRIM55-204ENST00000353317 BBS4Q96RK4 519 aa7.94□□□□□ -1.14
TRIM55-204ENST00000353317 PPIL3Q9H2H8 161 aaKnown RBP7.94□□□□□ -1.14
TRIM55-204ENST00000353317 SLC38A1Q9H2H9 487 aa7.94□□□□□ -1.14
TRIM55-204ENST00000353317 ATXN7L1Q9ULK2 861 aaPredicted RBP7.94□□□□□ -1.14
TRIM55-204ENST00000353317 CBLCQ9ULV8 474 aa7.94□□□□□ -1.14
TRIM55-204ENST00000353317 SIRT4Q9Y6E7 314 aaPredicted RBP7.94□□□□□ -1.14
TRIM55-204ENST00000353317 A0A0A6YYC8 382 aaPredicted RBP7.93□□□□□ -1.14
TRIM55-204ENST00000353317 A0A1B0GVC2 190 aa7.93□□□□□ -1.14
TRIM55-204ENST00000353317 A0A1W2PQM1 296 aa7.93□□□□□ -1.14
TRIM55-204ENST00000353317 A6NIN4 97 aa7.93□□□□□ -1.14
TRIM55-204ENST00000353317 I3L1I5 382 aaPredicted RBP7.93□□□□□ -1.14
TRIM55-204ENST00000353317 CYR61O00622 381 aa7.93□□□□□ -1.14
TRIM55-204ENST00000353317 SOCS6O14544 535 aa7.93□□□□□ -1.14
TRIM55-204ENST00000353317 ICMTO60725 284 aa7.93□□□□□ -1.14
TRIM55-204ENST00000353317 GALR3O60755 368 aaPredicted RBP7.93□□□□□ -1.14
TRIM55-204ENST00000353317 LDB3O75112 727 aa7.93□□□□□ -1.14
TRIM55-204ENST00000353317 THY1P04216 161 aa7.93□□□□□ -1.14
TRIM55-204ENST00000353317 DRD2P14416 443 aa7.93□□□□□ -1.14
TRIM55-204ENST00000353317 GLB1P16278 677 aa7.93□□□□□ -1.14
TRIM55-204ENST00000353317 AVPR2P30518 371 aa7.93□□□□□ -1.14
TRIM55-204ENST00000353317 HTR1FP30939 366 aa7.93□□□□□ -1.14
TRIM55-204ENST00000353317 ARRB1P49407 418 aaPredicted RBP7.93□□□□□ -1.14
TRIM55-204ENST00000353317 ST3GAL3Q11203 375 aa7.93□□□□□ -1.14
TRIM55-204ENST00000353317 ERV3-1Q14264 604 aa7.93□□□□□ -1.14
TRIM55-204ENST00000353317 GPR176Q14439 515 aa7.93□□□□□ -1.14
TRIM55-204ENST00000353317 SIGIRRQ6IA17 410 aa7.93□□□□□ -1.14
TRIM55-204ENST00000353317 IL20RBQ6UXL0 311 aa7.93□□□□□ -1.14
TRIM55-204ENST00000353317 ZNF767PQ75MW2 155 aa7.93□□□□□ -1.14
TRIM55-204ENST00000353317 C9orf62Q8N4C0 152 aa7.93□□□□□ -1.14
TRIM55-204ENST00000353317 METTL27Q8N6F8 245 aaPredicted RBP7.93□□□□□ -1.14
TRIM55-204ENST00000353317 CAMKVQ8NCB2 501 aa7.93□□□□□ -1.14
TRIM55-204ENST00000353317 OR52N1Q8NH53 320 aa7.93□□□□□ -1.14
TRIM55-204ENST00000353317 ANGPTL6Q8NI99 470 aa7.93□□□□□ -1.14
TRIM55-204ENST00000353317 RERGQ96A58 199 aaPredicted RBP7.93□□□□□ -1.14
TRIM55-204ENST00000353317 CCDC74AQ96AQ1 378 aa7.93□□□□□ -1.14
TRIM55-204ENST00000353317 ART5Q96L15 291 aa7.93□□□□□ -1.14
TRIM55-204ENST00000353317 TIMP4Q99727 224 aa7.93□□□□□ -1.14
TRIM55-204ENST00000353317 ARHGDIGQ99819 225 aa7.93□□□□□ -1.14
TRIM55-204ENST00000353317 LDHAL6BQ9BYZ2 381 aaPredicted RBP7.93□□□□□ -1.14
TRIM55-204ENST00000353317 HDHD2Q9H0R4 259 aa7.93□□□□□ -1.14
TRIM55-204ENST00000353317 EQTNQ9NQ60 294 aa7.93□□□□□ -1.14
TRIM55-204ENST00000353317 ASB6Q9NWX5 421 aa7.93□□□□□ -1.14
TRIM55-204ENST00000353317 A0A0A6YYJ9 748 aa7.93□□□□□ -1.14
TRIM55-204ENST00000353317 TGFBR3LH3BV60 316 aa7.93□□□□□ -1.14
TRIM55-204ENST00000353317 J3QRE1 110 aa7.93□□□□□ -1.14
TRIM55-204ENST00000353317 CDC42EP2O14613 210 aa7.93□□□□□ -1.14
TRIM55-204ENST00000353317 FABP7O15540 132 aa7.93□□□□□ -1.14
TRIM55-204ENST00000353317 CHP2O43745 196 aa7.93□□□□□ -1.14
TRIM55-204ENST00000353317 PIP5K1CO60331 668 aa7.93□□□□□ -1.14
TRIM55-204ENST00000353317 SLC19A2O60779 497 aa7.93□□□□□ -1.14
TRIM55-204ENST00000353317 RDH16O75452 317 aa7.93□□□□□ -1.14
TRIM55-204ENST00000353317 ZIC2O95409 532 aaPredicted RBP7.93□□□□□ -1.14
TRIM55-204ENST00000353317 NTSP30990 170 aa7.93□□□□□ -1.14
TRIM55-204ENST00000353317 PPM1FP49593 454 aaPredicted RBP7.93□□□□□ -1.14
TRIM55-204ENST00000353317 MAT1AQ00266 395 aaKnown RBP7.93□□□□□ -1.14
TRIM55-204ENST00000353317 GNA13Q14344 377 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms