RNA–Protein interactions for RNA: ENST00000349379.5

SNX3-202, Transcript of sorting nexin 3, humanhuman

TSL 2 BASIC

Gene SNX3, Length 890 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-202ENST00000349379 RNASE6Q93091 150 aaKnown RBP19.79■□□□□ 0.76
SNX3-202ENST00000349379 SRXN1Q9BYN0 137 aa19.79■□□□□ 0.76
SNX3-202ENST00000349379 PIGMQ9H3S5 423 aa19.79■□□□□ 0.76
SNX3-202ENST00000349379 CTPS2Q9NRF8 586 aa19.79■□□□□ 0.76
SNX3-202ENST00000349379 ARMCX1Q9P291 453 aa19.79■□□□□ 0.76
SNX3-202ENST00000349379 FOXD3Q9UJU5 478 aaPredicted RBP19.79■□□□□ 0.76
SNX3-202ENST00000349379 MCTS1Q9ULC4 181 aaKnown RBP19.79■□□□□ 0.76
SNX3-202ENST00000349379 ZNF232Q9UNY5 417 aa19.79■□□□□ 0.76
SNX3-202ENST00000349379 CENPEQ02224 2701 aa19.79■□□□□ 0.76
SNX3-202ENST00000349379 NPPAP01160 153 aa19.78■□□□□ 0.76
SNX3-202ENST00000349379 DRD4P21917 467 aa19.78■□□□□ 0.76
SNX3-202ENST00000349379 PRKAR1BP31321 381 aa19.78■□□□□ 0.76
SNX3-202ENST00000349379 GZMMP51124 257 aa19.78■□□□□ 0.76
SNX3-202ENST00000349379 PCBP3P57721 371 aaKnown RBP19.78■□□□□ 0.76
SNX3-202ENST00000349379 CARD18P57730 90 aa19.78■□□□□ 0.76
SNX3-202ENST00000349379 RBBP4Q09028 425 aa19.78■□□□□ 0.76
SNX3-202ENST00000349379 CAPRIN1Q14444 709 aaKnown RBP19.78■□□□□ 0.76
SNX3-202ENST00000349379 ZNF311Q5JNZ3 666 aa19.78■□□□□ 0.76
SNX3-202ENST00000349379 SPATA21Q7Z572 469 aa19.78■□□□□ 0.76
SNX3-202ENST00000349379 SERPINA11Q86U17 422 aa19.78■□□□□ 0.76
SNX3-202ENST00000349379 ADGRG3Q86Y34 549 aa19.78■□□□□ 0.76
SNX3-202ENST00000349379 ZNF295-AS1Q8N0V1 137 aa19.78■□□□□ 0.76
SNX3-202ENST00000349379 HIPK4Q8NE63 616 aa19.78■□□□□ 0.76
SNX3-202ENST00000349379 SLC25A43Q8WUT9 341 aaPredicted RBP19.78■□□□□ 0.76
SNX3-202ENST00000349379 CPNE4Q96A23 557 aaPredicted RBP19.78■□□□□ 0.76
SNX3-202ENST00000349379 LRRC58Q96CX6 371 aa19.78■□□□□ 0.76
SNX3-202ENST00000349379 STARD4Q96DR4 205 aa19.78■□□□□ 0.76
SNX3-202ENST00000349379 SERINC1Q9NRX5 453 aa19.78■□□□□ 0.76
SNX3-202ENST00000349379 CHRNA9Q9UGM1 479 aa19.78■□□□□ 0.76
SNX3-202ENST00000349379 PACSIN3Q9UKS6 424 aa19.78■□□□□ 0.76
SNX3-202ENST00000349379 FREM1Q5H8C1 2179 aa19.78■□□□□ 0.76
SNX3-202ENST00000349379 MRASO14807 208 aa19.77■□□□□ 0.76
SNX3-202ENST00000349379 CCDC22O60826 627 aa19.77■□□□□ 0.76
SNX3-202ENST00000349379 SYNGR4O95473 234 aa19.77■□□□□ 0.76
SNX3-202ENST00000349379 GKN3PP0CG01 181 aa19.77■□□□□ 0.76
SNX3-202ENST00000349379 PRF1P14222 555 aa19.77■□□□□ 0.76
SNX3-202ENST00000349379 SLC6A2P23975 617 aa19.77■□□□□ 0.76
SNX3-202ENST00000349379 SLC1A3P43003 542 aa19.77■□□□□ 0.76
SNX3-202ENST00000349379 HTR3AP46098 478 aa19.77■□□□□ 0.76
SNX3-202ENST00000349379 GYS2P54840 703 aa19.77■□□□□ 0.76
SNX3-202ENST00000349379 CYLC2Q14093 348 aaPredicted RBP19.77■□□□□ 0.76
SNX3-202ENST00000349379 SYT14P1Q58G82 188 aa19.77■□□□□ 0.76
SNX3-202ENST00000349379 NANOGP8Q6NSW7 305 aa19.77■□□□□ 0.76
SNX3-202ENST00000349379 VWA1Q6PCB0 445 aa19.77■□□□□ 0.76
SNX3-202ENST00000349379 ZNF550Q7Z398 422 aa19.77■□□□□ 0.76
SNX3-202ENST00000349379 C11orf65Q8NCR3 313 aa19.77■□□□□ 0.76
SNX3-202ENST00000349379 ATP6V1C2Q8NEY4 427 aa19.77■□□□□ 0.76
SNX3-202ENST00000349379 RNF128Q8TEB7 428 aa19.77■□□□□ 0.76
SNX3-202ENST00000349379 ELAC2Q9BQ52 826 aaKnown RBP19.77■□□□□ 0.76
SNX3-202ENST00000349379 SLC39A3Q9BRY0 314 aa19.77■□□□□ 0.76
SNX3-202ENST00000349379 ADAM19Q9H013 955 aa19.77■□□□□ 0.76
SNX3-202ENST00000349379 NANOGQ9H9S0 305 aa19.77■□□□□ 0.76
SNX3-202ENST00000349379 CACYBPQ9HB71 228 aaKnown RBP19.77■□□□□ 0.76
SNX3-202ENST00000349379 TIGARQ9NQ88 270 aa19.77■□□□□ 0.76
SNX3-202ENST00000349379 OSGIN1Q9UJX0 560 aa19.77■□□□□ 0.76
SNX3-202ENST00000349379 LOC100653049A0A140TA62 436 aa19.76■□□□□ 0.75
SNX3-202ENST00000349379 A0A1W2PNR3 127 aa19.76■□□□□ 0.75
SNX3-202ENST00000349379 A8MXE2 369 aa19.76■□□□□ 0.75
SNX3-202ENST00000349379 EEF1E1-BLOC1S5C9J1V9 151 aa19.76■□□□□ 0.75
SNX3-202ENST00000349379 MSTNO14793 375 aa19.76■□□□□ 0.75
SNX3-202ENST00000349379 EEF1E1O43324 174 aaKnown RBP19.76■□□□□ 0.75
SNX3-202ENST00000349379 SNX3O60493 162 aa19.76■□□□□ 0.75
SNX3-202ENST00000349379 SS18L1O75177 396 aaPredicted RBP19.76■□□□□ 0.75
SNX3-202ENST00000349379 KRT34O76011 436 aa19.76■□□□□ 0.75
SNX3-202ENST00000349379 CGAP01215 116 aa19.76■□□□□ 0.75
SNX3-202ENST00000349379 UQCRBP14927 111 aa19.76■□□□□ 0.75
SNX3-202ENST00000349379 FKBP2P26885 142 aaKnown RBP19.76■□□□□ 0.75
SNX3-202ENST00000349379 SLC7A1P30825 629 aa19.76■□□□□ 0.75
SNX3-202ENST00000349379 RAC3P60763 192 aa19.76■□□□□ 0.75
SNX3-202ENST00000349379 MMEL1Q495T6 779 aa19.76■□□□□ 0.75
SNX3-202ENST00000349379 DHRS4L2Q6PKH6 230 aa19.76■□□□□ 0.75
SNX3-202ENST00000349379 KRT73Q86Y46 540 aa19.76■□□□□ 0.75
SNX3-202ENST00000349379 ZZZ3Q8IYH5 903 aa19.76■□□□□ 0.75
SNX3-202ENST00000349379 OR8J3Q8NGG0 315 aa19.76■□□□□ 0.75
SNX3-202ENST00000349379 RP9Q8TA86 221 aaKnown RBP19.76■□□□□ 0.75
SNX3-202ENST00000349379 LRRC46Q96FV0 321 aa19.76■□□□□ 0.75
SNX3-202ENST00000349379 GMPPAQ96IJ6 420 aaPredicted RBP19.76■□□□□ 0.75
SNX3-202ENST00000349379 SPATA5L1Q9BVQ7 753 aa19.76■□□□□ 0.75
SNX3-202ENST00000349379 PRRG4Q9BZD6 226 aa19.76■□□□□ 0.75
SNX3-202ENST00000349379 ARMC7Q9H6L4 198 aa19.76■□□□□ 0.75
SNX3-202ENST00000349379 ANGPT4Q9Y264 503 aa19.76■□□□□ 0.75
SNX3-202ENST00000349379 SPIN1Q9Y657 262 aaPredicted RBP19.76■□□□□ 0.75
SNX3-202ENST00000349379 ANKHD1Q8IWZ3 2542 aaKnown RBP19.76■□□□□ 0.75
SNX3-202ENST00000349379 ITPR2Q14571 2701 aa19.75■□□□□ 0.75
SNX3-202ENST00000349379 GMNCA6NCL1 334 aa19.75■□□□□ 0.75
SNX3-202ENST00000349379 GCM2O75603 506 aaPredicted RBP19.75■□□□□ 0.75
SNX3-202ENST00000349379 PRG2P13727 222 aa19.75■□□□□ 0.75
SNX3-202ENST00000349379 CLK1P49759 484 aaKnown RBP19.75■□□□□ 0.75
SNX3-202ENST00000349379 POLR2HP52434 150 aaKnown RBP19.75■□□□□ 0.75
SNX3-202ENST00000349379 CYP51A1Q16850 503 aa19.75■□□□□ 0.75
SNX3-202ENST00000349379 TMPPEQ6ZT21 453 aa19.75■□□□□ 0.75
SNX3-202ENST00000349379 FAM214BQ7L5A3 538 aa19.75■□□□□ 0.75
SNX3-202ENST00000349379 BTLAQ7Z6A9 289 aa19.75■□□□□ 0.75
SNX3-202ENST00000349379 COMTD1Q86VU5 262 aa19.75■□□□□ 0.75
SNX3-202ENST00000349379 CALHM3Q86XJ0 350 aa19.75■□□□□ 0.75
SNX3-202ENST00000349379 MCEMP1Q8IX19 187 aa19.75■□□□□ 0.75
SNX3-202ENST00000349379 CNEP1R1Q8N9A8 125 aa19.75■□□□□ 0.75
SNX3-202ENST00000349379 OR10A6Q8NH74 314 aa19.75■□□□□ 0.75
SNX3-202ENST00000349379 OR5B2Q96R09 309 aa19.75■□□□□ 0.75
SNX3-202ENST00000349379 NSRP1Q9H0G5 558 aaKnown RBP19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms