RNA–Protein interactions for RNA: ENST00000345519.9

CLTA-202, Transcript of clathrin light chain A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLTA, Length 1,073 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTA-202ENST00000345519 OPN1LWP04000 364 aa17.71■□□□□ 0.43
CLTA-202ENST00000345519 NUDT7P0C024 238 aa17.71■□□□□ 0.43
CLTA-202ENST00000345519 AGTR1P30556 359 aa17.71■□□□□ 0.43
CLTA-202ENST00000345519 CCKARP32238 428 aa17.71■□□□□ 0.43
CLTA-202ENST00000345519 MAP2K6P52564 334 aa17.71■□□□□ 0.43
CLTA-202ENST00000345519 EPS8Q12929 822 aa17.71■□□□□ 0.43
CLTA-202ENST00000345519 RNPS1Q15287 305 aaKnown RBP17.71■□□□□ 0.43
CLTA-202ENST00000345519 TMEM176BQ3YBM2 270 aaPredicted RBP17.71■□□□□ 0.43
CLTA-202ENST00000345519 SYT14P1Q58G82 188 aa17.71■□□□□ 0.43
CLTA-202ENST00000345519 ZNF836Q6ZNA1 936 aa17.71■□□□□ 0.43
CLTA-202ENST00000345519 HMGN2P46Q86SG4 172 aa17.71■□□□□ 0.43
CLTA-202ENST00000345519 CNEP1R1Q8N9A8 125 aa17.71■□□□□ 0.43
CLTA-202ENST00000345519 THOC1Q96FV9 657 aaKnown RBP17.71■□□□□ 0.43
CLTA-202ENST00000345519 CPPED1Q9BRF8 314 aaPredicted RBP17.71■□□□□ 0.43
CLTA-202ENST00000345519 TMEM38AQ9H6F2 299 aa17.71■□□□□ 0.43
CLTA-202ENST00000345519 ELOVL5Q9NYP7 299 aa17.71■□□□□ 0.43
CLTA-202ENST00000345519 CHRNA9Q9UGM1 479 aa17.71■□□□□ 0.43
CLTA-202ENST00000345519 LEF1Q9UJU2 399 aaPredicted RBP17.71■□□□□ 0.43
CLTA-202ENST00000345519 ING1Q9UK53 422 aaPredicted RBP17.71■□□□□ 0.43
CLTA-202ENST00000345519 CORO2BQ9UQ03 480 aa17.71■□□□□ 0.43
CLTA-202ENST00000345519 ZNF443Q9Y2A4 671 aaPredicted RBP17.71■□□□□ 0.43
CLTA-202ENST00000345519 UQCRHLA0A096LP55 91 aa17.7■□□□□ 0.42
CLTA-202ENST00000345519 AP3D1O14617 1153 aa17.7■□□□□ 0.42
CLTA-202ENST00000345519 DNPH1O43598 174 aa17.7■□□□□ 0.42
CLTA-202ENST00000345519 CYP7B1O75881 506 aa17.7■□□□□ 0.42
CLTA-202ENST00000345519 SYNGR4O95473 234 aa17.7■□□□□ 0.42
CLTA-202ENST00000345519 PABPC4LP0CB38 370 aaKnown RBP17.7■□□□□ 0.42
CLTA-202ENST00000345519 EPXP11678 715 aa17.7■□□□□ 0.42
CLTA-202ENST00000345519 ETS2P15036 469 aa17.7■□□□□ 0.42
CLTA-202ENST00000345519 ACAA2P42765 397 aaKnown RBP17.7■□□□□ 0.42
CLTA-202ENST00000345519 HTR3AP46098 478 aa17.7■□□□□ 0.42
CLTA-202ENST00000345519 CLK1P49759 484 aaKnown RBP17.7■□□□□ 0.42
CLTA-202ENST00000345519 MERTKQ12866 999 aa17.7■□□□□ 0.42
CLTA-202ENST00000345519 MYBPHQ13203 477 aa17.7■□□□□ 0.42
CLTA-202ENST00000345519 RETREG3Q86VR2 466 aa17.7■□□□□ 0.42
CLTA-202ENST00000345519 ADGRG3Q86Y34 549 aa17.7■□□□□ 0.42
CLTA-202ENST00000345519 SLC43A2Q8N370 569 aa17.7■□□□□ 0.42
CLTA-202ENST00000345519 OR52P1PQ8NH57 321 aa17.7■□□□□ 0.42
CLTA-202ENST00000345519 BBS10Q8TAM1 723 aa17.7■□□□□ 0.42
CLTA-202ENST00000345519 TMEM120AQ9BXJ8 343 aa17.7■□□□□ 0.42
CLTA-202ENST00000345519 RSPO3Q9BXY4 272 aaPredicted RBP17.7■□□□□ 0.42
CLTA-202ENST00000345519 ADAM19Q9H013 955 aa17.7■□□□□ 0.42
CLTA-202ENST00000345519 BCO1Q9HAY6 547 aa17.7■□□□□ 0.42
CLTA-202ENST00000345519 FGFR1OP2Q9NVK5 253 aa17.7■□□□□ 0.42
CLTA-202ENST00000345519 KLHL13Q9P2N7 655 aa17.7■□□□□ 0.42
CLTA-202ENST00000345519 IFT52Q9Y366 437 aa17.7■□□□□ 0.42
CLTA-202ENST00000345519 EMC9Q9Y3B6 208 aa17.7■□□□□ 0.42
CLTA-202ENST00000345519 TUBAL3A6NHL2 446 aa17.69■□□□□ 0.42
CLTA-202ENST00000345519 A6NNC1 897 aa17.69■□□□□ 0.42
CLTA-202ENST00000345519 ZNF208O43345 1280 aa17.69■□□□□ 0.42
CLTA-202ENST00000345519 PGM3O95394 542 aa17.69■□□□□ 0.42
CLTA-202ENST00000345519 PMS2P2O95744 297 aa17.69■□□□□ 0.42
CLTA-202ENST00000345519 TROVE2P10155 538 aaKnown RBP eCLIP17.69■□□□□ 0.42
CLTA-202ENST00000345519 NCF2P19878 526 aaPredicted RBP17.69■□□□□ 0.42
CLTA-202ENST00000345519 CD79BP40259 229 aa17.69■□□□□ 0.42
CLTA-202ENST00000345519 SLC1A3P43003 542 aa17.69■□□□□ 0.42
CLTA-202ENST00000345519 CPA2P48052 419 aa17.69■□□□□ 0.42
CLTA-202ENST00000345519 SNTB1Q13884 538 aaKnown RBP17.69■□□□□ 0.42
CLTA-202ENST00000345519 ADRM1Q16186 407 aa17.69■□□□□ 0.42
CLTA-202ENST00000345519 HSP90B2PQ58FF3 399 aa17.69■□□□□ 0.42
CLTA-202ENST00000345519 RUNDC3AQ59EK9 446 aa17.69■□□□□ 0.42
CLTA-202ENST00000345519 RPS26P11Q5JNZ5 115 aaPredicted RBP17.69■□□□□ 0.42
CLTA-202ENST00000345519 GTF2IRD2BQ6EKJ0 949 aa17.69■□□□□ 0.42
CLTA-202ENST00000345519 ABLIM2Q6H8Q1 611 aa17.69■□□□□ 0.42
CLTA-202ENST00000345519 GTF2IRD2Q86UP8 949 aa17.69■□□□□ 0.42
CLTA-202ENST00000345519 VRK2Q86Y07 508 aa17.69■□□□□ 0.42
CLTA-202ENST00000345519 ZZZ3Q8IYH5 903 aa17.69■□□□□ 0.42
CLTA-202ENST00000345519 ABHD3Q8WU67 409 aa17.69■□□□□ 0.42
CLTA-202ENST00000345519 MAL2Q969L2 176 aa17.69■□□□□ 0.42
CLTA-202ENST00000345519 DACH2Q96NX9 599 aa17.69■□□□□ 0.42
CLTA-202ENST00000345519 ZNF317Q96PQ6 595 aaPredicted RBP17.69■□□□□ 0.42
CLTA-202ENST00000345519 SPATA9Q9BWV2 254 aa17.69■□□□□ 0.42
CLTA-202ENST00000345519 OPN3Q9H1Y3 402 aaPredicted RBP17.69■□□□□ 0.42
CLTA-202ENST00000345519 CTPS2Q9NRF8 586 aa17.69■□□□□ 0.42
CLTA-202ENST00000345519 SERINC1Q9NRX5 453 aa17.69■□□□□ 0.42
CLTA-202ENST00000345519 RASSF1Q9NS23 344 aa17.69■□□□□ 0.42
CLTA-202ENST00000345519 NDUFAF1Q9Y375 327 aa17.69■□□□□ 0.42
CLTA-202ENST00000345519 TESMINQ9Y4I5 508 aa17.69■□□□□ 0.42
CLTA-202ENST00000345519 SPIN1Q9Y657 262 aaPredicted RBP17.69■□□□□ 0.42
CLTA-202ENST00000345519 ZNF469Q96JG9 3925 aaPredicted RBP17.69■□□□□ 0.42
CLTA-202ENST00000345519 TMEM247A6NEH6 219 aa17.68■□□□□ 0.42
CLTA-202ENST00000345519 CFAP73A6NFT4 308 aa17.68■□□□□ 0.42
CLTA-202ENST00000345519 SMAD9O15198 467 aaKnown RBP17.68■□□□□ 0.42
CLTA-202ENST00000345519 CYTIPO60759 359 aa17.68■□□□□ 0.42
CLTA-202ENST00000345519 SLC7A1P30825 629 aa17.68■□□□□ 0.42
CLTA-202ENST00000345519 IDH2P48735 452 aaKnown RBP17.68■□□□□ 0.42
CLTA-202ENST00000345519 GUCY1A3Q02108 690 aa17.68■□□□□ 0.42
CLTA-202ENST00000345519 LARS2Q15031 903 aaKnown RBP17.68■□□□□ 0.42
CLTA-202ENST00000345519 COQ5Q5HYK3 327 aa17.68■□□□□ 0.42
CLTA-202ENST00000345519 TMPPEQ6ZT21 453 aa17.68■□□□□ 0.42
CLTA-202ENST00000345519 FCRLAQ7L513 359 aa17.68■□□□□ 0.42
CLTA-202ENST00000345519 ZNF563Q8TA94 476 aa17.68■□□□□ 0.42
CLTA-202ENST00000345519 ANKRD27Q96NW4 1050 aa17.68■□□□□ 0.42
CLTA-202ENST00000345519 PSD2Q9BQI7 771 aa17.68■□□□□ 0.42
CLTA-202ENST00000345519 TACO1Q9BSH4 297 aaKnown RBP17.68■□□□□ 0.42
CLTA-202ENST00000345519 PRRG4Q9BZD6 226 aa17.68■□□□□ 0.42
CLTA-202ENST00000345519 RLIMQ9NVW2 624 aa17.68■□□□□ 0.42
CLTA-202ENST00000345519 OSGIN1Q9UJX0 560 aa17.68■□□□□ 0.42
CLTA-202ENST00000345519 PROCRQ9UNN8 238 aa17.68■□□□□ 0.42
CLTA-202ENST00000345519 HDGFL3Q9Y3E1 203 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms