RNA–Protein interactions for RNA: ENST00000344726.9

HMGN3-202, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN3, Length 872 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-202ENST00000344726 FCRLAQ7L513 359 aa12.86□□□□□ -0.35
HMGN3-202ENST00000344726 DYDC1Q8WWB3 177 aa12.86□□□□□ -0.35
HMGN3-202ENST00000344726 CKAP2Q8WWK9 683 aa12.86□□□□□ -0.35
HMGN3-202ENST00000344726 MBD6Q96DN6 1003 aa12.86□□□□□ -0.35
HMGN3-202ENST00000344726 ITCHQ96J02 903 aa12.86□□□□□ -0.35
HMGN3-202ENST00000344726 SLC39A3Q9BRY0 314 aa12.86□□□□□ -0.35
HMGN3-202ENST00000344726 TMUB1Q9BVT8 246 aa12.86□□□□□ -0.35
HMGN3-202ENST00000344726 CCDC106Q9BWC9 280 aa12.86□□□□□ -0.35
HMGN3-202ENST00000344726 PAIP1Q9H074 479 aaKnown RBP12.86□□□□□ -0.35
HMGN3-202ENST00000344726 C12orf49Q9H741 205 aa12.86□□□□□ -0.35
HMGN3-202ENST00000344726 RMND5AQ9H871 391 aa12.86□□□□□ -0.35
HMGN3-202ENST00000344726 SLC52A3Q9NQ40 469 aa12.86□□□□□ -0.35
HMGN3-202ENST00000344726 EXOSC3Q9NQT5 275 aaKnown RBP12.86□□□□□ -0.35
HMGN3-202ENST00000344726 GLRX2Q9NS18 164 aa12.86□□□□□ -0.35
HMGN3-202ENST00000344726 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.86□□□□□ -0.35
HMGN3-202ENST00000344726 INTS9Q9NV88 658 aaKnown RBP12.86□□□□□ -0.35
HMGN3-202ENST00000344726 ARGLU1Q9NWB6 273 aaPredicted RBP12.86□□□□□ -0.35
HMGN3-202ENST00000344726 NDRG3Q9UGV2 375 aa12.86□□□□□ -0.35
HMGN3-202ENST00000344726 ING1Q9UK53 422 aaPredicted RBP12.86□□□□□ -0.35
HMGN3-202ENST00000344726 PCDHB14Q9Y5E9 798 aa12.86□□□□□ -0.35
HMGN3-202ENST00000344726 DSCAMO60469 2012 aa12.86□□□□□ -0.35
HMGN3-202ENST00000344726 ARID1AO14497 2285 aa12.86□□□□□ -0.35
HMGN3-202ENST00000344726 RAI1Q7Z5J4 1906 aaPredicted RBP12.86□□□□□ -0.35
HMGN3-202ENST00000344726 CADP27708 2225 aa12.85□□□□□ -0.35
HMGN3-202ENST00000344726 C2CD3Q4AC94 2353 aa12.85□□□□□ -0.35
HMGN3-202ENST00000344726 C16orf97H3BN30 126 aa12.85□□□□□ -0.35
HMGN3-202ENST00000344726 GOSR1O95249 250 aa12.85□□□□□ -0.35
HMGN3-202ENST00000344726 ANP32DO95626 131 aa12.85□□□□□ -0.35
HMGN3-202ENST00000344726 RAF1P04049 648 aa12.85□□□□□ -0.35
HMGN3-202ENST00000344726 TFPTP0C1Z6 253 aa12.85□□□□□ -0.35
HMGN3-202ENST00000344726 NR2F1P10589 423 aa12.85□□□□□ -0.35
HMGN3-202ENST00000344726 CD53P19397 219 aa12.85□□□□□ -0.35
HMGN3-202ENST00000344726 DNASE1P24855 282 aa12.85□□□□□ -0.35
HMGN3-202ENST00000344726 LOXP28300 417 aaPredicted RBP12.85□□□□□ -0.35
HMGN3-202ENST00000344726 SLC7A1P30825 629 aa12.85□□□□□ -0.35
HMGN3-202ENST00000344726 CRATP43155 626 aa12.85□□□□□ -0.35
HMGN3-202ENST00000344726 ANXA11P50995 505 aaKnown RBP12.85□□□□□ -0.35
HMGN3-202ENST00000344726 RAC3P60763 192 aa12.85□□□□□ -0.35
HMGN3-202ENST00000344726 C6orf10Q5SRN2 563 aa12.85□□□□□ -0.35
HMGN3-202ENST00000344726 ANKRD34AQ69YU3 496 aa12.85□□□□□ -0.35
HMGN3-202ENST00000344726 NUFIP2Q7Z417 695 aaKnown RBP12.85□□□□□ -0.35
HMGN3-202ENST00000344726 KRTAP1-3Q8IUG1 177 aa12.85□□□□□ -0.35
HMGN3-202ENST00000344726 TUSC5Q8IXB3 177 aa12.85□□□□□ -0.35
HMGN3-202ENST00000344726 WDR60Q8WVS4 1066 aa12.85□□□□□ -0.35
HMGN3-202ENST00000344726 TMEM234Q8WY98 164 aa12.85□□□□□ -0.35
HMGN3-202ENST00000344726 ALPK1Q96QP1 1244 aa12.85□□□□□ -0.35
HMGN3-202ENST00000344726 OR5B2Q96R09 309 aa12.85□□□□□ -0.35
HMGN3-202ENST00000344726 CCDC28BQ9BUN5 200 aa12.85□□□□□ -0.35
HMGN3-202ENST00000344726 KLHL4Q9C0H6 718 aa12.85□□□□□ -0.35
HMGN3-202ENST00000344726 MTHFD2LQ9H903 347 aaPredicted RBP12.85□□□□□ -0.35
HMGN3-202ENST00000344726 TIGARQ9NQ88 270 aa12.85□□□□□ -0.35
HMGN3-202ENST00000344726 CTPS2Q9NRF8 586 aa12.85□□□□□ -0.35
HMGN3-202ENST00000344726 SLAMF8Q9P0V8 285 aa12.85□□□□□ -0.35
HMGN3-202ENST00000344726 DSPPQ9NZW4 1301 aa12.85□□□□□ -0.35
HMGN3-202ENST00000344726 FLNAP21333 2647 aaKnown RBP12.84□□□□□ -0.35
HMGN3-202ENST00000344726 SMAD9O15198 467 aaKnown RBP12.84□□□□□ -0.35
HMGN3-202ENST00000344726 BCHEP06276 602 aa12.84□□□□□ -0.35
HMGN3-202ENST00000344726 THBDP07204 575 aa12.84□□□□□ -0.35
HMGN3-202ENST00000344726 CRYGSP22914 178 aa12.84□□□□□ -0.35
HMGN3-202ENST00000344726 DSTNP60981 165 aa12.84□□□□□ -0.35
HMGN3-202ENST00000344726 RNPS1Q15287 305 aaKnown RBP12.84□□□□□ -0.35
HMGN3-202ENST00000344726 DEFB113Q30KQ7 82 aa12.84□□□□□ -0.35
HMGN3-202ENST00000344726 SYT14P1Q58G82 188 aa12.84□□□□□ -0.35
HMGN3-202ENST00000344726 RPS26P11Q5JNZ5 115 aaPredicted RBP12.84□□□□□ -0.35
HMGN3-202ENST00000344726 MRPL2Q5T653 305 aaKnown RBP12.84□□□□□ -0.35
HMGN3-202ENST00000344726 BLOC1S3Q6QNY0 202 aa12.84□□□□□ -0.35
HMGN3-202ENST00000344726 STAC2Q6ZMT1 411 aa12.84□□□□□ -0.35
HMGN3-202ENST00000344726 VRK2Q86Y07 508 aa12.84□□□□□ -0.35
HMGN3-202ENST00000344726 ADGRG3Q86Y34 549 aa12.84□□□□□ -0.35
HMGN3-202ENST00000344726 TGIF2LYQ8IUE0 185 aa12.84□□□□□ -0.35
HMGN3-202ENST00000344726 MSRB3Q8IXL7 192 aa12.84□□□□□ -0.35
HMGN3-202ENST00000344726 CMIPQ8IY22 773 aa12.84□□□□□ -0.35
HMGN3-202ENST00000344726 ARFGAP2Q8N6H7 521 aa12.84□□□□□ -0.35
HMGN3-202ENST00000344726 GOLGA6L1Q8N7Z2 621 aa12.84□□□□□ -0.35
HMGN3-202ENST00000344726 ZNF563Q8TA94 476 aa12.84□□□□□ -0.35
HMGN3-202ENST00000344726 SLC38A5Q8WUX1 472 aa12.84□□□□□ -0.35
HMGN3-202ENST00000344726 RNF166Q96A37 237 aaPredicted RBP12.84□□□□□ -0.35
HMGN3-202ENST00000344726 DNAJA3Q96EY1 480 aa12.84□□□□□ -0.35
HMGN3-202ENST00000344726 THOC1Q96FV9 657 aaKnown RBP12.84□□□□□ -0.35
HMGN3-202ENST00000344726 ZC3HAV1LQ96H79 300 aaKnown RBP12.84□□□□□ -0.35
HMGN3-202ENST00000344726 REXO5Q96IC2 774 aaKnown RBP12.84□□□□□ -0.35
HMGN3-202ENST00000344726 PSD2Q9BQI7 771 aa12.84□□□□□ -0.35
HMGN3-202ENST00000344726 MED18Q9BUE0 208 aa12.84□□□□□ -0.35
HMGN3-202ENST00000344726 RLIMQ9NVW2 624 aa12.84□□□□□ -0.35
HMGN3-202ENST00000344726 SLC25A37Q9NYZ2 338 aa12.84□□□□□ -0.35
HMGN3-202ENST00000344726 KLHL13Q9P2N7 655 aa12.84□□□□□ -0.35
HMGN3-202ENST00000344726 P2RX2Q9UBL9 471 aa12.84□□□□□ -0.35
HMGN3-202ENST00000344726 CHST2Q9Y4C5 530 aa12.84□□□□□ -0.35
HMGN3-202ENST00000344726 CASKO14936 926 aa12.83□□□□□ -0.36
HMGN3-202ENST00000344726 PRKD3O94806 890 aa12.83□□□□□ -0.36
HMGN3-202ENST00000344726 DBIP07108 87 aaKnown RBP12.83□□□□□ -0.36
HMGN3-202ENST00000344726 PABPC4LP0CB38 370 aaKnown RBP12.83□□□□□ -0.36
HMGN3-202ENST00000344726 IL7RP16871 459 aa12.83□□□□□ -0.36
HMGN3-202ENST00000344726 EDNRAP25101 427 aa12.83□□□□□ -0.36
HMGN3-202ENST00000344726 APOBEC1P41238 236 aaKnown RBP12.83□□□□□ -0.36
HMGN3-202ENST00000344726 MAGEA8P43361 318 aa12.83□□□□□ -0.36
HMGN3-202ENST00000344726 IDH2P48735 452 aaKnown RBP12.83□□□□□ -0.36
HMGN3-202ENST00000344726 DIO1P49895 249 aa12.83□□□□□ -0.36
HMGN3-202ENST00000344726 STX1BP61266 288 aa12.83□□□□□ -0.36
HMGN3-202ENST00000344726 ADAM8P78325 824 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms