RNA–Protein interactions for RNA: ENST00000342988.7

SMAD4-201, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-201ENST00000342988 MUS81Q96NY9 551 aa16.62■□□□□ 0.25
SMAD4-201ENST00000342988 PRAP1Q96NZ9 151 aa16.62■□□□□ 0.25
SMAD4-201ENST00000342988 SACM1LQ9NTJ5 587 aa16.62■□□□□ 0.25
SMAD4-201ENST00000342988 POLLQ9UGP5 575 aa16.62■□□□□ 0.25
SMAD4-201ENST00000342988 S100A8P05109 93 aa16.62■□□□□ 0.25
SMAD4-201ENST00000342988 CATSPERGQ6ZRH7 1159 aa16.62■□□□□ 0.25
SMAD4-201ENST00000342988 BCO2Q9BYV7 579 aa16.62■□□□□ 0.25
SMAD4-201ENST00000342988 GPR34Q9UPC5 381 aa16.62■□□□□ 0.25
SMAD4-201ENST00000342988 GAB2Q9UQC2 676 aa16.62■□□□□ 0.25
SMAD4-201ENST00000342988 PARP4Q9UKK3 1724 aaKnown RBP16.62■□□□□ 0.25
SMAD4-201ENST00000342988 TMEM244Q5VVB8 128 aa16.62■□□□□ 0.25
SMAD4-201ENST00000342988 VASNQ6EMK4 673 aa16.62■□□□□ 0.25
SMAD4-201ENST00000342988 CSNK1A1LQ8N752 337 aa16.62■□□□□ 0.25
SMAD4-201ENST00000342988 MTHFD2P13995 350 aa16.62■□□□□ 0.25
SMAD4-201ENST00000342988 TIA1P31483 386 aaKnown RBP eCLIP16.62■□□□□ 0.25
SMAD4-201ENST00000342988 GRINAQ7Z429 371 aa16.62■□□□□ 0.25
SMAD4-201ENST00000342988 KDM1BQ8NB78 822 aa16.62■□□□□ 0.25
SMAD4-201ENST00000342988 RNF11Q9Y3C5 154 aa16.62■□□□□ 0.25
SMAD4-201ENST00000342988 SPO11Q9Y5K1 396 aa16.62■□□□□ 0.25
SMAD4-201ENST00000342988 HTR1EP28566 365 aa16.62■□□□□ 0.25
SMAD4-201ENST00000342988 ZNF133P52736 654 aaPredicted RBP16.62■□□□□ 0.25
SMAD4-201ENST00000342988 TAS2R45P59539 299 aa16.62■□□□□ 0.25
SMAD4-201ENST00000342988 SLC7A9P82251 487 aa16.62■□□□□ 0.25
SMAD4-201ENST00000342988 STK11Q15831 433 aa16.62■□□□□ 0.25
SMAD4-201ENST00000342988 RABEPKQ7Z6M1 372 aa16.62■□□□□ 0.25
SMAD4-201ENST00000342988 RNF150Q9ULK6 438 aa16.62■□□□□ 0.25
SMAD4-201ENST00000342988 ANKRD36CQ5JPF3 1778 aa16.61■□□□□ 0.25
SMAD4-201ENST00000342988 BLACEA4D250 179 aa16.61■□□□□ 0.25
SMAD4-201ENST00000342988 KHDC1LQ5JSQ8 128 aa16.61■□□□□ 0.25
SMAD4-201ENST00000342988 DTX3Q8N9I9 347 aa16.61■□□□□ 0.25
SMAD4-201ENST00000342988 EBF4Q9BQW3 602 aa16.61■□□□□ 0.25
SMAD4-201ENST00000342988 NPAP1Q9NZP6 1156 aa16.61■□□□□ 0.25
SMAD4-201ENST00000342988 POLHQ9Y253 713 aa16.61■□□□□ 0.25
SMAD4-201ENST00000342988 RNASEK-C17orf49H0YIS7 233 aa16.61■□□□□ 0.25
SMAD4-201ENST00000342988 ZNF701M0R085 212 aaPredicted RBP16.61■□□□□ 0.25
SMAD4-201ENST00000342988 SERPINA2P20848 420 aa16.61■□□□□ 0.25
SMAD4-201ENST00000342988 CSNK1A1P48729 337 aa16.61■□□□□ 0.25
SMAD4-201ENST00000342988 METTL27Q8N6F8 245 aaPredicted RBP16.61■□□□□ 0.25
SMAD4-201ENST00000342988 ARHGDIGQ99819 225 aa16.61■□□□□ 0.25
SMAD4-201ENST00000342988 SHARPINQ9H0F6 387 aa16.61■□□□□ 0.25
SMAD4-201ENST00000342988 TEX50A0A1B0GTY4 177 aa16.61■□□□□ 0.25
SMAD4-201ENST00000342988 WNT10BO00744 389 aa16.61■□□□□ 0.25
SMAD4-201ENST00000342988 CHRM4P08173 479 aa16.61■□□□□ 0.25
SMAD4-201ENST00000342988 CDH26Q8IXH8 852 aa16.61■□□□□ 0.25
SMAD4-201ENST00000342988 PXT1Q8NFP0 134 aa16.61■□□□□ 0.25
SMAD4-201ENST00000342988 C14orf79Q96F83 325 aa16.61■□□□□ 0.25
SMAD4-201ENST00000342988 VIPR2P41587 438 aa16.61■□□□□ 0.25
SMAD4-201ENST00000342988 OR5I1Q13606 314 aa16.61■□□□□ 0.25
SMAD4-201ENST00000342988 TPRG1Q6ZUI0 275 aa16.61■□□□□ 0.25
SMAD4-201ENST00000342988 SH3RF2Q8TEC5 729 aa16.61■□□□□ 0.25
SMAD4-201ENST00000342988 IRF7Q92985 503 aa16.61■□□□□ 0.25
SMAD4-201ENST00000342988 GPR62Q9BZJ7 368 aa16.61■□□□□ 0.25
SMAD4-201ENST00000342988 A0A0B4J2A0 478 aa16.61■□□□□ 0.25
SMAD4-201ENST00000342988 ARPC1BO15143 372 aaKnown RBP16.61■□□□□ 0.25
SMAD4-201ENST00000342988 SYN1P17600 705 aa16.61■□□□□ 0.25
SMAD4-201ENST00000342988 ZNF154Q13106 437 aa16.61■□□□□ 0.25
SMAD4-201ENST00000342988 KCNAB2Q13303 367 aa16.61■□□□□ 0.25
SMAD4-201ENST00000342988 OR8B8Q15620 311 aa16.61■□□□□ 0.25
SMAD4-201ENST00000342988 TCTE1Q5JU00 501 aa16.61■□□□□ 0.25
SMAD4-201ENST00000342988 MS4A4EQ96PG1 132 aa16.61■□□□□ 0.25
SMAD4-201ENST00000342988 DEFB118Q96PH6 123 aa16.61■□□□□ 0.25
SMAD4-201ENST00000342988 S1PR3Q99500 378 aa16.61■□□□□ 0.25
SMAD4-201ENST00000342988 SHPKQ9UHJ6 478 aa16.61■□□□□ 0.25
SMAD4-201ENST00000342988 TRAPPC2LQ9UL33 140 aa16.61■□□□□ 0.25
SMAD4-201ENST00000342988 TISP43B9A030 160 aa16.61■□□□□ 0.25
SMAD4-201ENST00000342988 KLF11O14901 512 aa16.61■□□□□ 0.25
SMAD4-201ENST00000342988 OR51B5Q9H339 312 aa16.61■□□□□ 0.25
SMAD4-201ENST00000342988 ZNF407Q9C0G0 2248 aa16.61■□□□□ 0.25
SMAD4-201ENST00000342988 PRAMEF19Q5SWL8 479 aa16.6■□□□□ 0.25
SMAD4-201ENST00000342988 FAM182AQ5T1J6 154 aa16.6■□□□□ 0.25
SMAD4-201ENST00000342988 NETO2Q8NC67 525 aa16.6■□□□□ 0.25
SMAD4-201ENST00000342988 GNG12Q9UBI6 72 aa16.6■□□□□ 0.25
SMAD4-201ENST00000342988 RALYQ9UKM9 306 aaKnown RBP16.6■□□□□ 0.25
SMAD4-201ENST00000342988 PLRG1O43660 514 aaKnown RBP16.6■□□□□ 0.25
SMAD4-201ENST00000342988 KCNE1P15382 129 aa16.6■□□□□ 0.25
SMAD4-201ENST00000342988 SULT1A2P50226 295 aa16.6■□□□□ 0.25
SMAD4-201ENST00000342988 ID2Q02363 134 aa16.6■□□□□ 0.25
SMAD4-201ENST00000342988 C3orf38Q5JPI3 329 aa16.6■□□□□ 0.25
SMAD4-201ENST00000342988 SLC6A19Q695T7 634 aa16.6■□□□□ 0.25
SMAD4-201ENST00000342988 ZNF620Q6ZNG0 422 aa16.6■□□□□ 0.25
SMAD4-201ENST00000342988 MBOAT4Q96T53 435 aa16.6■□□□□ 0.25
SMAD4-201ENST00000342988 LINC00597Q9H2U6 94 aa16.6■□□□□ 0.25
SMAD4-201ENST00000342988 SLC17A6Q9P2U8 582 aa16.6■□□□□ 0.25
SMAD4-201ENST00000342988 SUSD2Q9UGT4 822 aa16.6■□□□□ 0.25
SMAD4-201ENST00000342988 PLAGL1Q9UM63 463 aa16.6■□□□□ 0.25
SMAD4-201ENST00000342988 ZNF587BE7ETH6 402 aa16.6■□□□□ 0.25
SMAD4-201ENST00000342988 OVCH1Q7RTY7 1134 aa16.6■□□□□ 0.25
SMAD4-201ENST00000342988 REC114Q7Z4M0 266 aa16.6■□□□□ 0.25
SMAD4-201ENST00000342988 GLB1L2Q8IW92 636 aa16.6■□□□□ 0.25
SMAD4-201ENST00000342988 RAB8BQ92930 207 aa16.6■□□□□ 0.25
SMAD4-201ENST00000342988 TMEM184BQ9Y519 407 aaPredicted RBP16.6■□□□□ 0.25
SMAD4-201ENST00000342988 HELTA6NFD8 242 aa16.6■□□□□ 0.25
SMAD4-201ENST00000342988 C2CD4BA6NLJ0 364 aa16.6■□□□□ 0.25
SMAD4-201ENST00000342988 VWA1Q6PCB0 445 aa16.6■□□□□ 0.25
SMAD4-201ENST00000342988 TECPR1Q7Z6L1 1165 aa16.6■□□□□ 0.25
SMAD4-201ENST00000342988 OR56B1Q8NGI3 324 aa16.6■□□□□ 0.25
SMAD4-201ENST00000342988 FIBINQ8TAL6 211 aa16.6■□□□□ 0.25
SMAD4-201ENST00000342988 FCRL1Q96LA6 429 aa16.6■□□□□ 0.25
SMAD4-201ENST00000342988 ERCC6L2Q5T890 1561 aa16.6■□□□□ 0.25
SMAD4-201ENST00000342988 PRSS44E7EML9 344 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms