RNA–Protein interactions for RNA: ENST00000342415.5

SNRNP48-201, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP48, Length 4,173 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-201ENST00000342415 NPAP1Q9NZP6 1156 aa11.56□□□□□ -0.56
SNRNP48-201ENST00000342415 A0A0A6YYJ9 748 aa11.56□□□□□ -0.56
SNRNP48-201ENST00000342415 SLC43A1O75387 559 aa11.56□□□□□ -0.56
SNRNP48-201ENST00000342415 HOXC8P31273 242 aa11.56□□□□□ -0.56
SNRNP48-201ENST00000342415 BSGP35613 385 aa11.56□□□□□ -0.56
SNRNP48-201ENST00000342415 TM4SF4P48230 202 aa11.56□□□□□ -0.56
SNRNP48-201ENST00000342415 DUSP5Q16690 384 aa11.56□□□□□ -0.56
SNRNP48-201ENST00000342415 TMEM215Q68D42 235 aa11.56□□□□□ -0.56
SNRNP48-201ENST00000342415 ABHD17CQ6PCB6 329 aa11.56□□□□□ -0.56
SNRNP48-201ENST00000342415 PEG10Q86TG7 708 aaKnown RBP11.56□□□□□ -0.56
SNRNP48-201ENST00000342415 OR5T3Q8NGG3 340 aa11.56□□□□□ -0.56
SNRNP48-201ENST00000342415 OR4D11Q8NGI4 311 aa11.56□□□□□ -0.56
SNRNP48-201ENST00000342415 SMARCD2Q92925 531 aa11.56□□□□□ -0.56
SNRNP48-201ENST00000342415 RAD9AQ99638 391 aa11.56□□□□□ -0.56
SNRNP48-201ENST00000342415 VN1R3Q9BXE9 311 aa11.56□□□□□ -0.56
SNRNP48-201ENST00000342415 ACTR6Q9GZN1 396 aa11.56□□□□□ -0.56
SNRNP48-201ENST00000342415 SAV1Q9H4B6 383 aaPredicted RBP11.56□□□□□ -0.56
SNRNP48-201ENST00000342415 SLC39A1Q9NY26 324 aa11.56□□□□□ -0.56
SNRNP48-201ENST00000342415 UPB1Q9UBR1 384 aa11.56□□□□□ -0.56
SNRNP48-201ENST00000342415 A4GNTQ9UNA3 340 aa11.56□□□□□ -0.56
SNRNP48-201ENST00000342415 TMEM72A0PK05 275 aa11.56□□□□□ -0.56
SNRNP48-201ENST00000342415 CDC40O60508 579 aaKnown RBP eCLIP11.56□□□□□ -0.56
SNRNP48-201ENST00000342415 SLC22A5O76082 557 aa11.56□□□□□ -0.56
SNRNP48-201ENST00000342415 PIPP12273 146 aaPredicted RBP11.56□□□□□ -0.56
SNRNP48-201ENST00000342415 BMPR1AP36894 532 aa11.56□□□□□ -0.56
SNRNP48-201ENST00000342415 YOD1Q5VVQ6 348 aaPredicted RBP11.56□□□□□ -0.56
SNRNP48-201ENST00000342415 FAM198BQ6UWH4 519 aa11.56□□□□□ -0.56
SNRNP48-201ENST00000342415 LYPD8Q6UX82 237 aa11.56□□□□□ -0.56
SNRNP48-201ENST00000342415 TMEM150AQ86TG1 271 aa11.56□□□□□ -0.56
SNRNP48-201ENST00000342415 BEST3Q8N1M1 668 aa11.56□□□□□ -0.56
SNRNP48-201ENST00000342415 MRPL43Q8N983 215 aaKnown RBP11.56□□□□□ -0.56
SNRNP48-201ENST00000342415 OR52R1Q8NGF1 315 aa11.56□□□□□ -0.56
SNRNP48-201ENST00000342415 PPP1R14AQ96A00 147 aa11.56□□□□□ -0.56
SNRNP48-201ENST00000342415 TMEM43Q9BTV4 400 aa11.56□□□□□ -0.56
SNRNP48-201ENST00000342415 SGPP1Q9BX95 441 aa11.56□□□□□ -0.56
SNRNP48-201ENST00000342415 BCL2L14Q9BZR8 327 aa11.56□□□□□ -0.56
SNRNP48-201ENST00000342415 NT5DC2Q9H857 520 aa11.56□□□□□ -0.56
SNRNP48-201ENST00000342415 PLEKHA1Q9HB21 404 aa11.56□□□□□ -0.56
SNRNP48-201ENST00000342415 EXO1Q9UQ84 846 aaKnown RBP11.56□□□□□ -0.56
SNRNP48-201ENST00000342415 SLC35A3Q9Y2D2 325 aa11.56□□□□□ -0.56
SNRNP48-201ENST00000342415 GPR55Q9Y2T6 319 aaPredicted RBP11.56□□□□□ -0.56
SNRNP48-201ENST00000342415 TMEM129A0AVI4 362 aa11.55□□□□□ -0.56
SNRNP48-201ENST00000342415 CIB4A0PJX0 185 aa11.55□□□□□ -0.56
SNRNP48-201ENST00000342415 AMY2AP04746 511 aa11.55□□□□□ -0.56
SNRNP48-201ENST00000342415 EIF4EP06730 217 aaKnown RBP11.55□□□□□ -0.56
SNRNP48-201ENST00000342415 HLA-DMAP28067 261 aa11.55□□□□□ -0.56
SNRNP48-201ENST00000342415 HTR1FP30939 366 aa11.55□□□□□ -0.56
SNRNP48-201ENST00000342415 PDE7AQ13946 482 aa11.55□□□□□ -0.56
SNRNP48-201ENST00000342415 DECR1Q16698 335 aa11.55□□□□□ -0.56
SNRNP48-201ENST00000342415 C3P1Q6ZMU1 363 aa11.55□□□□□ -0.56
SNRNP48-201ENST00000342415 LRRC56Q8IYG6 542 aaPredicted RBP11.55□□□□□ -0.56
SNRNP48-201ENST00000342415 PMM1Q92871 262 aa11.55□□□□□ -0.56
SNRNP48-201ENST00000342415 NOX4Q9NPH5 578 aa11.55□□□□□ -0.56
SNRNP48-201ENST00000342415 PRTFDC1Q9NRG1 225 aa11.55□□□□□ -0.56
SNRNP48-201ENST00000342415 FBXL2Q9UKC9 423 aa11.55□□□□□ -0.56
SNRNP48-201ENST00000342415 CEP250Q9BV73 2442 aa11.55□□□□□ -0.56
SNRNP48-201ENST00000342415 C17orf113A0A1B0GUU1 675 aa11.55□□□□□ -0.56
SNRNP48-201ENST00000342415 TRABD2BA6NFA1 517 aa11.55□□□□□ -0.56
SNRNP48-201ENST00000342415 OR2W5A6NFC9 320 aa11.55□□□□□ -0.56
SNRNP48-201ENST00000342415 CYB5AP00167 134 aa11.55□□□□□ -0.56
SNRNP48-201ENST00000342415 C1QBP02746 253 aa11.55□□□□□ -0.56
SNRNP48-201ENST00000342415 S100A9P06702 114 aaKnown RBP11.55□□□□□ -0.56
SNRNP48-201ENST00000342415 PRPH2P23942 346 aa11.55□□□□□ -0.56
SNRNP48-201ENST00000342415 ETV6P41212 452 aa11.55□□□□□ -0.56
SNRNP48-201ENST00000342415 EPHA5P54756 1037 aa11.55□□□□□ -0.56
SNRNP48-201ENST00000342415 RPS15AP62244 130 aaKnown RBP11.55□□□□□ -0.56
SNRNP48-201ENST00000342415 ACTA2P62736 377 aa11.55□□□□□ -0.56
SNRNP48-201ENST00000342415 ACTG2P63267 376 aa11.55□□□□□ -0.56
SNRNP48-201ENST00000342415 CHAF1BQ13112 559 aa11.55□□□□□ -0.56
SNRNP48-201ENST00000342415 ARHGAP19Q14CB8 494 aa11.55□□□□□ -0.56
SNRNP48-201ENST00000342415 MBOAT2Q6ZWT7 520 aa11.55□□□□□ -0.56
SNRNP48-201ENST00000342415 SLC35D2Q76EJ3 337 aa11.55□□□□□ -0.56
SNRNP48-201ENST00000342415 ZNF619Q8N2I2 560 aa11.55□□□□□ -0.56
SNRNP48-201ENST00000342415 KIAA1958Q8N8K9 716 aa11.55□□□□□ -0.56
SNRNP48-201ENST00000342415 DNAAF1Q8NEP3 725 aa11.55□□□□□ -0.56
SNRNP48-201ENST00000342415 OR2L3Q8NG85 312 aa11.55□□□□□ -0.56
SNRNP48-201ENST00000342415 OR5AK2Q8NH90 309 aa11.55□□□□□ -0.56
SNRNP48-201ENST00000342415 FGF13Q92913 245 aa11.55□□□□□ -0.56
SNRNP48-201ENST00000342415 FAM46BQ96A09 425 aa11.55□□□□□ -0.56
SNRNP48-201ENST00000342415 SLC35A4Q96G79 324 aa11.55□□□□□ -0.56
SNRNP48-201ENST00000342415 TMEM41AQ96HV5 264 aa11.55□□□□□ -0.56
SNRNP48-201ENST00000342415 TEAD3Q99594 435 aa11.55□□□□□ -0.56
SNRNP48-201ENST00000342415 NKX3-1Q99801 234 aaPredicted RBP11.55□□□□□ -0.56
SNRNP48-201ENST00000342415 EVA1BQ9NVM1 165 aa11.55□□□□□ -0.56
SNRNP48-201ENST00000342415 SAGE1Q9NXZ1 904 aa11.55□□□□□ -0.56
SNRNP48-201ENST00000342415 MBD2Q9UBB5 411 aa11.55□□□□□ -0.56
SNRNP48-201ENST00000342415 ADAM18Q9Y3Q7 739 aa11.55□□□□□ -0.56
SNRNP48-201ENST00000342415 KLF8O95600 359 aaPredicted RBP11.55□□□□□ -0.56
SNRNP48-201ENST00000342415 GALEQ14376 348 aa11.55□□□□□ -0.56
SNRNP48-201ENST00000342415 MPEG1Q2M385 716 aa11.55□□□□□ -0.56
SNRNP48-201ENST00000342415 SLC25A35Q3KQZ1 300 aa11.55□□□□□ -0.56
SNRNP48-201ENST00000342415 CDNFQ49AH0 187 aa11.55□□□□□ -0.56
SNRNP48-201ENST00000342415 C12orf40Q86WS4 652 aa11.55□□□□□ -0.56
SNRNP48-201ENST00000342415 CCDC36Q8IYA8 594 aa11.55□□□□□ -0.56
SNRNP48-201ENST00000342415 CDRT4Q8N9R6 151 aa11.55□□□□□ -0.56
SNRNP48-201ENST00000342415 THAP6Q8TBB0 222 aa11.55□□□□□ -0.56
SNRNP48-201ENST00000342415 ZFAND1Q8TCF1 268 aa11.55□□□□□ -0.56
SNRNP48-201ENST00000342415 CNOT9Q92600 299 aaKnown RBP11.55□□□□□ -0.56
SNRNP48-201ENST00000342415 ULBP3Q9BZM4 244 aa11.55□□□□□ -0.56
SNRNP48-201ENST00000342415 KLHL21Q9UJP4 597 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms