RNA–Protein interactions for RNA: ENST00000341316.6

SPG7-202, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 1 (best) BASIC

Gene SPG7, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-202ENST00000341316 CHP2O43745 196 aa18.53■□□□□ 0.56
SPG7-202ENST00000341316 HYAL3O43820 417 aaPredicted RBP18.53■□□□□ 0.56
SPG7-202ENST00000341316 RCBTB2O95199 551 aa18.53■□□□□ 0.56
SPG7-202ENST00000341316 HLA-DQB1P01920 261 aa18.53■□□□□ 0.56
SPG7-202ENST00000341316 CD8BP10966 210 aa18.53■□□□□ 0.56
SPG7-202ENST00000341316 GLULP15104 373 aa18.53■□□□□ 0.56
SPG7-202ENST00000341316 PRKCAP17252 672 aa18.53■□□□□ 0.56
SPG7-202ENST00000341316 STX4Q12846 297 aa18.53■□□□□ 0.56
SPG7-202ENST00000341316 FHL1Q13642 323 aa18.53■□□□□ 0.56
SPG7-202ENST00000341316 TMEM91Q6ZNR0 172 aa18.53■□□□□ 0.56
SPG7-202ENST00000341316 MARCH9Q86YJ5 346 aa18.53■□□□□ 0.56
SPG7-202ENST00000341316 CDK20Q8IZL9 346 aa18.53■□□□□ 0.56
SPG7-202ENST00000341316 ARL14Q8N4G2 192 aa18.53■□□□□ 0.56
SPG7-202ENST00000341316 METTL27Q8N6F8 245 aaPredicted RBP18.53■□□□□ 0.56
SPG7-202ENST00000341316 RCBTB1Q8NDN9 531 aa18.53■□□□□ 0.56
SPG7-202ENST00000341316 RBM18Q96H35 190 aaKnown RBP18.53■□□□□ 0.56
SPG7-202ENST00000341316 ALG5Q9Y673 324 aa18.53■□□□□ 0.56
SPG7-202ENST00000341316 ATXN8OSP0DMR3 200 aa18.52■□□□□ 0.56
SPG7-202ENST00000341316 CHRNB1P11230 501 aa18.52■□□□□ 0.56
SPG7-202ENST00000341316 RNH1P13489 461 aaKnown RBP18.52■□□□□ 0.56
SPG7-202ENST00000341316 BLKP51451 505 aa18.52■□□□□ 0.56
SPG7-202ENST00000341316 GALK2Q01415 458 aa18.52■□□□□ 0.56
SPG7-202ENST00000341316 IL18Q14116 193 aa18.52■□□□□ 0.56
SPG7-202ENST00000341316 EFR3AQ14156 821 aa18.52■□□□□ 0.56
SPG7-202ENST00000341316 NDUFAF6Q330K2 333 aa18.52■□□□□ 0.56
SPG7-202ENST00000341316 CHCHD2P9Q5T1J5 151 aaPredicted RBP18.52■□□□□ 0.56
SPG7-202ENST00000341316 ACBD7Q8N6N7 88 aa18.52■□□□□ 0.56
SPG7-202ENST00000341316 YIPF7Q8N8F6 280 aa18.52■□□□□ 0.56
SPG7-202ENST00000341316 SMAP2Q8WU79 429 aaPredicted RBP18.52■□□□□ 0.56
SPG7-202ENST00000341316 TNFRSF13CQ96RJ3 184 aa18.52■□□□□ 0.56
SPG7-202ENST00000341316 ZNF426Q9BUY5 554 aa18.52■□□□□ 0.56
SPG7-202ENST00000341316 C14orf105Q9NVL8 296 aa18.52■□□□□ 0.56
SPG7-202ENST00000341316 RBFOX1Q9NWB1 397 aaKnown RBP18.52■□□□□ 0.56
SPG7-202ENST00000341316 TMEM5Q9Y2B1 443 aa18.52■□□□□ 0.56
SPG7-202ENST00000341316 CLCA3PQ9Y6N3 262 aa18.52■□□□□ 0.56
SPG7-202ENST00000341316 A0A0C4DFX4 3053 aa18.52■□□□□ 0.56
SPG7-202ENST00000341316 FAM25AB3EWG3 89 aa18.52■□□□□ 0.55
SPG7-202ENST00000341316 FAM25CB3EWG5 89 aa18.52■□□□□ 0.55
SPG7-202ENST00000341316 FAM25GB3EWG6 89 aa18.52■□□□□ 0.55
SPG7-202ENST00000341316 MAOAP21397 527 aa18.52■□□□□ 0.55
SPG7-202ENST00000341316 PAICSP22234 425 aaKnown RBP18.52■□□□□ 0.55
SPG7-202ENST00000341316 ALAS2P22557 587 aa18.52■□□□□ 0.55
SPG7-202ENST00000341316 GAS6Q14393 721 aa18.52■□□□□ 0.55
SPG7-202ENST00000341316 ZNF267Q14586 743 aaPredicted RBP18.52■□□□□ 0.55
SPG7-202ENST00000341316 GRAMD2AQ8IUY3 354 aa18.52■□□□□ 0.55
SPG7-202ENST00000341316 CYB561A3Q8NBI2 242 aa18.52■□□□□ 0.55
SPG7-202ENST00000341316 DNAJA4Q8WW22 397 aaPredicted RBP18.52■□□□□ 0.55
SPG7-202ENST00000341316 ALG8Q9BVK2 526 aa18.52■□□□□ 0.55
SPG7-202ENST00000341316 OR51V1Q9H2C8 321 aa18.52■□□□□ 0.55
SPG7-202ENST00000341316 RPRD1BQ9NQG5 326 aaKnown RBP18.52■□□□□ 0.55
SPG7-202ENST00000341316 ACOXLQ9NUZ1 547 aa18.52■□□□□ 0.55
SPG7-202ENST00000341316 FBXL21Q9UKT6 434 aa18.52■□□□□ 0.55
SPG7-202ENST00000341316 TMEM184BQ9Y519 407 aaPredicted RBP18.52■□□□□ 0.55
SPG7-202ENST00000341316 GNB5O14775 395 aa18.51■□□□□ 0.55
SPG7-202ENST00000341316 CTNSO60931 367 aa18.51■□□□□ 0.55
SPG7-202ENST00000341316 ALX3O95076 343 aa18.51■□□□□ 0.55
SPG7-202ENST00000341316 PPP1R3DO95685 299 aa18.51■□□□□ 0.55
SPG7-202ENST00000341316 MRPL3P09001 348 aaKnown RBP18.51■□□□□ 0.55
SPG7-202ENST00000341316 ZNHIT3Q15649 155 aaPredicted RBP18.51■□□□□ 0.55
SPG7-202ENST00000341316 TCTE3Q8IZS6 198 aa18.51■□□□□ 0.55
SPG7-202ENST00000341316 NEIL3Q8TAT5 605 aa18.51■□□□□ 0.55
SPG7-202ENST00000341316 ZC3HAV1LQ96H79 300 aaKnown RBP18.51■□□□□ 0.55
SPG7-202ENST00000341316 SENP5Q96HI0 755 aaPredicted RBP18.51■□□□□ 0.55
SPG7-202ENST00000341316 TEAD3Q99594 435 aa18.51■□□□□ 0.55
SPG7-202ENST00000341316 NLKQ9UBE8 527 aa18.51■□□□□ 0.55
SPG7-202ENST00000341316 PRKNO60260 465 aaPredicted RBP18.51■□□□□ 0.55
SPG7-202ENST00000341316 HLA-DPB1P04440 258 aa18.51■□□□□ 0.55
SPG7-202ENST00000341316 PRKAR1AP10644 381 aa18.51■□□□□ 0.55
SPG7-202ENST00000341316 EVX1P49640 407 aa18.51■□□□□ 0.55
SPG7-202ENST00000341316 CRMP1Q14194 572 aa18.51■□□□□ 0.55
SPG7-202ENST00000341316 ALG10BQ5I7T1 473 aa18.51■□□□□ 0.55
SPG7-202ENST00000341316 MZT2BQ6NZ67 158 aa18.51■□□□□ 0.55
SPG7-202ENST00000341316 SYT13Q7L8C5 426 aa18.51■□□□□ 0.55
SPG7-202ENST00000341316 C17orf50Q8WW18 174 aa18.51■□□□□ 0.55
SPG7-202ENST00000341316 MCCC2Q9HCC0 563 aa18.51■□□□□ 0.55
SPG7-202ENST00000341316 PRTFDC1Q9NRG1 225 aa18.51■□□□□ 0.55
SPG7-202ENST00000341316 LRIT1Q9P2V4 623 aa18.51■□□□□ 0.55
SPG7-202ENST00000341316 SDK1Q7Z5N4 2213 aa18.5■□□□□ 0.55
SPG7-202ENST00000341316 IGHV1OR15-9A0A0B4J2B8 117 aa18.5■□□□□ 0.55
SPG7-202ENST00000341316 FAM86C2PA6NEL3 165 aa18.5■□□□□ 0.55
SPG7-202ENST00000341316 PRR23D1E9PI22 279 aaPredicted RBP18.5■□□□□ 0.55
SPG7-202ENST00000341316 NPIPB9F8W1W9 429 aa18.5■□□□□ 0.55
SPG7-202ENST00000341316 LYRM1O43325 122 aa18.5■□□□□ 0.55
SPG7-202ENST00000341316 SRPX2O60687 465 aaPredicted RBP18.5■□□□□ 0.55
SPG7-202ENST00000341316 FAM157BP0CG42 384 aa18.5■□□□□ 0.55
SPG7-202ENST00000341316 PRR23D2P0DMB1 279 aaPredicted RBP18.5■□□□□ 0.55
SPG7-202ENST00000341316 CT45A8P0DMV1 189 aa18.5■□□□□ 0.55
SPG7-202ENST00000341316 CT45A9P0DMV2 189 aa18.5■□□□□ 0.55
SPG7-202ENST00000341316 GPR3P46089 330 aa18.5■□□□□ 0.55
SPG7-202ENST00000341316 CAPZBP47756 277 aa18.5■□□□□ 0.55
SPG7-202ENST00000341316 SLC16A1P53985 500 aa18.5■□□□□ 0.55
SPG7-202ENST00000341316 IGLV3-21P80748 117 aaPredicted RBP18.5■□□□□ 0.55
SPG7-202ENST00000341316 CT45A2Q5DJT8 189 aa18.5■□□□□ 0.55
SPG7-202ENST00000341316 RPL13AP3Q6NVV1 102 aa18.5■□□□□ 0.55
SPG7-202ENST00000341316 KIRREL2Q6UWL6 708 aa18.5■□□□□ 0.55
SPG7-202ENST00000341316 OAFQ86UD1 273 aa18.5■□□□□ 0.55
SPG7-202ENST00000341316 OR10H4Q8NGA5 316 aa18.5■□□□□ 0.55
SPG7-202ENST00000341316 UPRTQ96BW1 309 aa18.5■□□□□ 0.55
SPG7-202ENST00000341316 ASB6Q9NWX5 421 aa18.5■□□□□ 0.55
SPG7-202ENST00000341316 BABAM2Q9NXR7 383 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms