RNA–Protein interactions for RNA: ENST00000340541.4

VAPA-201, Transcript of VAMP associated protein A, humanhuman

TSL 5 BASIC

Gene VAPA, Length 1,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-201ENST00000340541 SAR1AQ9NR31 198 aa13.78□□□□□ -0.2
VAPA-201ENST00000340541 RASSF1Q9NS23 344 aa13.78□□□□□ -0.2
VAPA-201ENST00000340541 RLIMQ9NVW2 624 aa13.78□□□□□ -0.2
VAPA-201ENST00000340541 PAQR5Q9NXK6 330 aaPredicted RBP13.78□□□□□ -0.2
VAPA-201ENST00000340541 ZFHX3Q15911 3703 aa13.78□□□□□ -0.2
VAPA-201ENST00000340541 EEF1E1-BLOC1S5C9J1V9 151 aa13.77□□□□□ -0.21
VAPA-201ENST00000340541 FBP2O00757 339 aa13.77□□□□□ -0.21
VAPA-201ENST00000340541 EEF1E1O43324 174 aaKnown RBP13.77□□□□□ -0.21
VAPA-201ENST00000340541 CGAP01215 116 aa13.77□□□□□ -0.21
VAPA-201ENST00000340541 THBS1P07996 1170 aa13.77□□□□□ -0.21
VAPA-201ENST00000340541 ARAFP10398 606 aa13.77□□□□□ -0.21
VAPA-201ENST00000340541 FCGR2AP12318 317 aa13.77□□□□□ -0.21
VAPA-201ENST00000340541 PPIBP23284 216 aaKnown RBP13.77□□□□□ -0.21
VAPA-201ENST00000340541 UQCRC1P31930 480 aa13.77□□□□□ -0.21
VAPA-201ENST00000340541 MERTKQ12866 999 aa13.77□□□□□ -0.21
VAPA-201ENST00000340541 SNTB1Q13884 538 aaKnown RBP13.77□□□□□ -0.21
VAPA-201ENST00000340541 DAZAP2Q15038 168 aaPredicted RBP13.77□□□□□ -0.21
VAPA-201ENST00000340541 ADRM1Q16186 407 aa13.77□□□□□ -0.21
VAPA-201ENST00000340541 RNF220Q5VTB9 566 aa13.77□□□□□ -0.21
VAPA-201ENST00000340541 EEF1A1P5Q5VTE0 462 aa13.77□□□□□ -0.21
VAPA-201ENST00000340541 BTLAQ7Z6A9 289 aa13.77□□□□□ -0.21
VAPA-201ENST00000340541 DHDDSQ86SQ9 333 aa13.77□□□□□ -0.21
VAPA-201ENST00000340541 PEX5LQ8IYB4 626 aa13.77□□□□□ -0.21
VAPA-201ENST00000340541 ATP6V1C2Q8NEY4 427 aa13.77□□□□□ -0.21
VAPA-201ENST00000340541 C10orf82Q8WW14 230 aa13.77□□□□□ -0.21
VAPA-201ENST00000340541 OSTF1Q92882 214 aa13.77□□□□□ -0.21
VAPA-201ENST00000340541 ANKRD27Q96NW4 1050 aa13.77□□□□□ -0.21
VAPA-201ENST00000340541 PIGMQ9H3S5 423 aa13.77□□□□□ -0.21
VAPA-201ENST00000340541 KLHL14Q9P2G3 628 aa13.77□□□□□ -0.21
VAPA-201ENST00000340541 ST6GALNAC2Q9UJ37 374 aa13.77□□□□□ -0.21
VAPA-201ENST00000340541 PACSIN3Q9UKS6 424 aa13.77□□□□□ -0.21
VAPA-201ENST00000340541 ZNF443Q9Y2A4 671 aaPredicted RBP13.77□□□□□ -0.21
VAPA-201ENST00000340541 GJE1A6NN92 205 aa13.76□□□□□ -0.21
VAPA-201ENST00000340541 A8MXE2 369 aa13.76□□□□□ -0.21
VAPA-201ENST00000340541 FAAHO00519 579 aa13.76□□□□□ -0.21
VAPA-201ENST00000340541 ANGPT2O15123 496 aa13.76□□□□□ -0.21
VAPA-201ENST00000340541 GOSR1O95249 250 aa13.76□□□□□ -0.21
VAPA-201ENST00000340541 PGM3O95394 542 aa13.76□□□□□ -0.21
VAPA-201ENST00000340541 ACAA2P42765 397 aaKnown RBP13.76□□□□□ -0.21
VAPA-201ENST00000340541 IDH2P48735 452 aaKnown RBP13.76□□□□□ -0.21
VAPA-201ENST00000340541 CARD18P57730 90 aa13.76□□□□□ -0.21
VAPA-201ENST00000340541 EPS8Q12929 822 aa13.76□□□□□ -0.21
VAPA-201ENST00000340541 KLF10Q13118 480 aa13.76□□□□□ -0.21
VAPA-201ENST00000340541 SELPLGQ14242 412 aa13.76□□□□□ -0.21
VAPA-201ENST00000340541 GNA13Q14344 377 aa13.76□□□□□ -0.21
VAPA-201ENST00000340541 ZNF239Q16600 458 aaKnown RBP13.76□□□□□ -0.21
VAPA-201ENST00000340541 LIN52Q52LA3 116 aa13.76□□□□□ -0.21
VAPA-201ENST00000340541 GCNT6Q5T4J0 391 aa13.76□□□□□ -0.21
VAPA-201ENST00000340541 C3orf33Q6P1S2 294 aa13.76□□□□□ -0.21
VAPA-201ENST00000340541 GRINAQ7Z429 371 aa13.76□□□□□ -0.21
VAPA-201ENST00000340541 TGIF2LYQ8IUE0 185 aa13.76□□□□□ -0.21
VAPA-201ENST00000340541 ZZZ3Q8IYH5 903 aa13.76□□□□□ -0.21
VAPA-201ENST00000340541 CLIP4Q8N3C7 705 aa13.76□□□□□ -0.21
VAPA-201ENST00000340541 CNEP1R1Q8N9A8 125 aa13.76□□□□□ -0.21
VAPA-201ENST00000340541 ZNF563Q8TA94 476 aa13.76□□□□□ -0.21
VAPA-201ENST00000340541 BBS10Q8TAM1 723 aa13.76□□□□□ -0.21
VAPA-201ENST00000340541 CGREF1Q99674 301 aa13.76□□□□□ -0.21
VAPA-201ENST00000340541 TMEM38AQ9H6F2 299 aa13.76□□□□□ -0.21
VAPA-201ENST00000340541 CTPS2Q9NRF8 586 aa13.76□□□□□ -0.21
VAPA-201ENST00000340541 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.76□□□□□ -0.21
VAPA-201ENST00000340541 MCTS1Q9ULC4 181 aaKnown RBP13.76□□□□□ -0.21
VAPA-201ENST00000340541 MAP1AP78559 2803 aaPredicted RBP13.75□□□□□ -0.21
VAPA-201ENST00000340541 MPDZO75970 2070 aa13.75□□□□□ -0.21
VAPA-201ENST00000340541 A0A1W2PNR3 127 aa13.75□□□□□ -0.21
VAPA-201ENST00000340541 TMEM247A6NEH6 219 aa13.75□□□□□ -0.21
VAPA-201ENST00000340541 CFAP73A6NFT4 308 aa13.75□□□□□ -0.21
VAPA-201ENST00000340541 MSTNO14793 375 aa13.75□□□□□ -0.21
VAPA-201ENST00000340541 SS18L1O75177 396 aaPredicted RBP13.75□□□□□ -0.21
VAPA-201ENST00000340541 SYNGR4O95473 234 aa13.75□□□□□ -0.21
VAPA-201ENST00000340541 PRG2P13727 222 aa13.75□□□□□ -0.21
VAPA-201ENST00000340541 ETS2P15036 469 aa13.75□□□□□ -0.21
VAPA-201ENST00000340541 APOBEC1P41238 236 aaKnown RBP13.75□□□□□ -0.21
VAPA-201ENST00000340541 SIRPAP78324 504 aa13.75□□□□□ -0.21
VAPA-201ENST00000340541 CDK6Q00534 326 aa13.75□□□□□ -0.21
VAPA-201ENST00000340541 PDSS1Q5T2R2 415 aa13.75□□□□□ -0.21
VAPA-201ENST00000340541 FAM214BQ7L5A3 538 aa13.75□□□□□ -0.21
VAPA-201ENST00000340541 LUZP2Q86TE4 346 aa13.75□□□□□ -0.21
VAPA-201ENST00000340541 ADGRG3Q86Y34 549 aa13.75□□□□□ -0.21
VAPA-201ENST00000340541 KIF18BQ86Y91 864 aa13.75□□□□□ -0.21
VAPA-201ENST00000340541 NFKBIDQ8NI38 313 aa13.75□□□□□ -0.21
VAPA-201ENST00000340541 RNF128Q8TEB7 428 aa13.75□□□□□ -0.21
VAPA-201ENST00000340541 ROBO4Q8WZ75 1007 aa13.75□□□□□ -0.21
VAPA-201ENST00000340541 CPNE4Q96A23 557 aaPredicted RBP13.75□□□□□ -0.21
VAPA-201ENST00000340541 GMPPAQ96IJ6 420 aaPredicted RBP13.75□□□□□ -0.21
VAPA-201ENST00000340541 SPATA9Q9BWV2 254 aa13.75□□□□□ -0.21
VAPA-201ENST00000340541 RBM24Q9BX46 236 aaKnown RBP13.75□□□□□ -0.21
VAPA-201ENST00000340541 CLEC4MQ9H2X3 399 aaPredicted RBP13.75□□□□□ -0.21
VAPA-201ENST00000340541 CCM2LQ9NUG4 571 aaPredicted RBP13.75□□□□□ -0.21
VAPA-201ENST00000340541 GALNT8Q9NY28 637 aa13.75□□□□□ -0.21
VAPA-201ENST00000340541 CRIM1Q9NZV1 1036 aa13.75□□□□□ -0.21
VAPA-201ENST00000340541 CLEC4AQ9UMR7 237 aa13.75□□□□□ -0.21
VAPA-201ENST00000340541 CORO2BQ9UQ03 480 aa13.75□□□□□ -0.21
VAPA-201ENST00000340541 A6NNC1 897 aa13.74□□□□□ -0.21
VAPA-201ENST00000340541 EVPLLA8MZ36 301 aa13.74□□□□□ -0.21
VAPA-201ENST00000340541 FXYD1O00168 92 aa13.74□□□□□ -0.21
VAPA-201ENST00000340541 PABPC4LP0CB38 370 aaKnown RBP13.74□□□□□ -0.21
VAPA-201ENST00000340541 GKN3PP0CG01 181 aa13.74□□□□□ -0.21
VAPA-201ENST00000340541 CD8BP10966 210 aa13.74□□□□□ -0.21
VAPA-201ENST00000340541 KLK2P20151 261 aa13.74□□□□□ -0.21
VAPA-201ENST00000340541 DNASE1P24855 282 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms