RNA–Protein interactions for RNA: ENST00000339997.8

RTN3-202, Transcript of reticulon 3, humanhuman

TSL 1 (best) BASIC

Gene RTN3, Length 4,886 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-202ENST00000339997 RAB28P51157 221 aa8.14□□□□□ -1.11
RTN3-202ENST00000339997 ZNF140P52738 457 aaPredicted RBP8.14□□□□□ -1.11
RTN3-202ENST00000339997 SEC61A1P61619 476 aaKnown RBP8.14□□□□□ -1.11
RTN3-202ENST00000339997 DPY19L2P1Q6NXN4 242 aa8.14□□□□□ -1.11
RTN3-202ENST00000339997 SLC46A3Q7Z3Q1 461 aa8.14□□□□□ -1.11
RTN3-202ENST00000339997 SIAH3Q8IW03 269 aa8.14□□□□□ -1.11
RTN3-202ENST00000339997 IL17RCQ8NAC3 791 aa8.14□□□□□ -1.11
RTN3-202ENST00000339997 HAVCR2Q8TDQ0 301 aa8.14□□□□□ -1.11
RTN3-202ENST00000339997 GCDHQ92947 438 aaPredicted RBP8.14□□□□□ -1.11
RTN3-202ENST00000339997 SLCO4A1Q96BD0 722 aa8.14□□□□□ -1.11
RTN3-202ENST00000339997 TPSD1Q9BZJ3 242 aa8.14□□□□□ -1.11
RTN3-202ENST00000339997 ACTL8Q9H568 366 aa8.14□□□□□ -1.11
RTN3-202ENST00000339997 HEBP1Q9NRV9 189 aa8.14□□□□□ -1.11
RTN3-202ENST00000339997 TESQ9UGI8 421 aaKnown RBP8.14□□□□□ -1.11
RTN3-202ENST00000339997 CA12O43570 354 aa8.14□□□□□ -1.11
RTN3-202ENST00000339997 SLC16A7O60669 478 aa8.14□□□□□ -1.11
RTN3-202ENST00000339997 NXPH3O95157 252 aa8.14□□□□□ -1.11
RTN3-202ENST00000339997 KCNK5O95279 499 aa8.14□□□□□ -1.11
RTN3-202ENST00000339997 IFNA5P01569 189 aa8.14□□□□□ -1.11
RTN3-202ENST00000339997 NME2P22392 152 aa8.14□□□□□ -1.11
RTN3-202ENST00000339997 HOXC8P31273 242 aa8.14□□□□□ -1.11
RTN3-202ENST00000339997 CASRP41180 1078 aa8.14□□□□□ -1.11
RTN3-202ENST00000339997 GP2P55259 537 aaKnown RBP8.14□□□□□ -1.11
RTN3-202ENST00000339997 RRAS2P62070 204 aaPredicted RBP8.14□□□□□ -1.11
RTN3-202ENST00000339997 PLGLB1Q02325 96 aa8.14□□□□□ -1.11
RTN3-202ENST00000339997 SRYQ05066 204 aa8.14□□□□□ -1.11
RTN3-202ENST00000339997 C2orf76Q3KRA6 126 aa8.14□□□□□ -1.11
RTN3-202ENST00000339997 RAET1LQ5VY80 246 aa8.14□□□□□ -1.11
RTN3-202ENST00000339997 ZNF322Q6U7Q0 402 aaPredicted RBP8.14□□□□□ -1.11
RTN3-202ENST00000339997 RFPL4BQ6ZWI9 263 aa8.14□□□□□ -1.11
RTN3-202ENST00000339997 ZNF765Q7L2R6 523 aa8.14□□□□□ -1.11
RTN3-202ENST00000339997 SERINC5Q86VE9 423 aa8.14□□□□□ -1.11
RTN3-202ENST00000339997 C12orf40Q86WS4 652 aa8.14□□□□□ -1.11
RTN3-202ENST00000339997 MMP21Q8N119 569 aa8.14□□□□□ -1.11
RTN3-202ENST00000339997 ZNF511Q8NB15 262 aa8.14□□□□□ -1.11
RTN3-202ENST00000339997 SLAIN1Q8ND83 568 aa8.14□□□□□ -1.11
RTN3-202ENST00000339997 OR51T1Q8NGJ9 327 aa8.14□□□□□ -1.11
RTN3-202ENST00000339997 PDCD1LG2Q9BQ51 273 aa8.14□□□□□ -1.11
RTN3-202ENST00000339997 POLMQ9NP87 494 aaPredicted RBP8.14□□□□□ -1.11
RTN3-202ENST00000339997 RBFOX1Q9NWB1 397 aaKnown RBP8.14□□□□□ -1.11
RTN3-202ENST00000339997 PPP1R14DQ9NXH3 145 aa8.14□□□□□ -1.11
RTN3-202ENST00000339997 ACTR10Q9NZ32 417 aa8.14□□□□□ -1.11
RTN3-202ENST00000339997 PSORS1C1Q9UIG5 152 aa8.14□□□□□ -1.11
RTN3-202ENST00000339997 TMEM14AQ9Y6G1 99 aa8.14□□□□□ -1.11
RTN3-202ENST00000339997 V9GY05 133 aa8.14□□□□□ -1.11
RTN3-202ENST00000339997 COL16A1Q07092 1604 aaPredicted RBP8.13□□□□□ -1.11
RTN3-202ENST00000339997 RAB19A4D1S5 217 aa8.13□□□□□ -1.11
RTN3-202ENST00000339997 SLC9B1P1A6NJY1 282 aa8.13□□□□□ -1.11
RTN3-202ENST00000339997 CLDN24A6NM45 220 aa8.13□□□□□ -1.11
RTN3-202ENST00000339997 M0QYG6 137 aa8.13□□□□□ -1.11
RTN3-202ENST00000339997 PRKNO60260 465 aaPredicted RBP8.13□□□□□ -1.11
RTN3-202ENST00000339997 SEC14L2O76054 403 aa8.13□□□□□ -1.11
RTN3-202ENST00000339997 AOAHP28039 575 aa8.13□□□□□ -1.11
RTN3-202ENST00000339997 RPS27P42677 84 aaKnown RBP8.13□□□□□ -1.11
RTN3-202ENST00000339997 HCCSP53701 268 aa8.13□□□□□ -1.11
RTN3-202ENST00000339997 ACTBP60709 375 aa8.13□□□□□ -1.11
RTN3-202ENST00000339997 ACTG1P63261 375 aa8.13□□□□□ -1.11
RTN3-202ENST00000339997 GPR50Q13585 617 aa8.13□□□□□ -1.11
RTN3-202ENST00000339997 MLC1Q15049 377 aa8.13□□□□□ -1.11
RTN3-202ENST00000339997 GDPGP1Q6ZNW5 385 aa8.13□□□□□ -1.11
RTN3-202ENST00000339997 C12orf45Q8N5I9 185 aaPredicted RBP8.13□□□□□ -1.11
RTN3-202ENST00000339997 LGALS14Q8TCE9 139 aa8.13□□□□□ -1.11
RTN3-202ENST00000339997 TCTEX1D2Q8WW35 142 aa8.13□□□□□ -1.11
RTN3-202ENST00000339997 IL1F10Q8WWZ1 152 aa8.13□□□□□ -1.11
RTN3-202ENST00000339997 OR5B12Q96R08 314 aa8.13□□□□□ -1.11
RTN3-202ENST00000339997 OR14A2Q96R54 314 aa8.13□□□□□ -1.11
RTN3-202ENST00000339997 SLC22A12Q96S37 553 aa8.13□□□□□ -1.11
RTN3-202ENST00000339997 A0A0B4J203 849 aa8.13□□□□□ -1.11
RTN3-202ENST00000339997 hCG_1807616A0A1W2PRN6 198 aa8.13□□□□□ -1.11
RTN3-202ENST00000339997 LGALS8O00214 317 aa8.13□□□□□ -1.11
RTN3-202ENST00000339997 FGF19O95750 216 aa8.13□□□□□ -1.11
RTN3-202ENST00000339997 CASP6P55212 293 aa8.13□□□□□ -1.11
RTN3-202ENST00000339997 DLX5P56178 289 aa8.13□□□□□ -1.11
RTN3-202ENST00000339997 ISL1P61371 349 aa8.13□□□□□ -1.11
RTN3-202ENST00000339997 HSD11B2P80365 405 aa8.13□□□□□ -1.11
RTN3-202ENST00000339997 DHCR24Q15392 516 aa8.13□□□□□ -1.11
RTN3-202ENST00000339997 LTB4RQ15722 352 aa8.13□□□□□ -1.11
RTN3-202ENST00000339997 ADAM5Q6NVV9 412 aa8.13□□□□□ -1.11
RTN3-202ENST00000339997 ADGRF3Q8IZF5 1079 aa8.13□□□□□ -1.11
RTN3-202ENST00000339997 TM9SF4Q92544 642 aa8.13□□□□□ -1.11
RTN3-202ENST00000339997 CHFRQ96EP1 664 aa8.13□□□□□ -1.11
RTN3-202ENST00000339997 CPPED1Q9BRF8 314 aaPredicted RBP8.13□□□□□ -1.11
RTN3-202ENST00000339997 ACTRT3Q9BYD9 372 aa8.13□□□□□ -1.11
RTN3-202ENST00000339997 TMEM231Q9H6L2 316 aa8.13□□□□□ -1.11
RTN3-202ENST00000339997 POLHQ9Y253 713 aa8.13□□□□□ -1.11
RTN3-202ENST00000339997 SPENQ96T58 3664 aaKnown RBP8.13□□□□□ -1.11
RTN3-202ENST00000339997 CFAP54Q96N23 3096 aa8.13□□□□□ -1.11
RTN3-202ENST00000339997 IGKV6D-21A0A0A0MT36 114 aa8.13□□□□□ -1.11
RTN3-202ENST00000339997 STMND1H3BQB6 276 aa8.13□□□□□ -1.11
RTN3-202ENST00000339997 SSX4O60224 188 aa8.13□□□□□ -1.11
RTN3-202ENST00000339997 DBHP09172 617 aa8.13□□□□□ -1.11
RTN3-202ENST00000339997 S100PP25815 95 aa8.13□□□□□ -1.11
RTN3-202ENST00000339997 GPR143P51810 404 aa8.13□□□□□ -1.11
RTN3-202ENST00000339997 POLR2HP52434 150 aaKnown RBP8.13□□□□□ -1.11
RTN3-202ENST00000339997 RAB40BQ12829 278 aa8.13□□□□□ -1.11
RTN3-202ENST00000339997 AQP6Q13520 282 aa8.13□□□□□ -1.11
RTN3-202ENST00000339997 ELAVL3Q14576 367 aaKnown RBP8.13□□□□□ -1.11
RTN3-202ENST00000339997 CLINT1Q14677 625 aa8.13□□□□□ -1.11
RTN3-202ENST00000339997 TMEM88Q6PEY1 159 aa8.13□□□□□ -1.11
RTN3-202ENST00000339997 FIGLAQ6QHK4 219 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms