RNA–Protein interactions for RNA: ENST00000339488.8

PTCHD4-201, Transcript of patched domain containing 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PTCHD4, Length 2,850 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-201ENST00000339488 CBLN4Q9NTU7 201 aa8.97□□□□□ -0.97
PTCHD4-201ENST00000339488 TMEM248Q9NWD8 314 aa8.97□□□□□ -0.97
PTCHD4-201ENST00000339488 DOK5Q9P104 306 aa8.97□□□□□ -0.97
PTCHD4-201ENST00000339488 STOX2Q9P2F5 926 aaPredicted RBP8.97□□□□□ -0.97
PTCHD4-201ENST00000339488 GRHPRQ9UBQ7 328 aa8.97□□□□□ -0.97
PTCHD4-201ENST00000339488 ADAMTS5Q9UNA0 930 aa8.97□□□□□ -0.97
PTCHD4-201ENST00000339488 NOD1Q9Y239 953 aa8.97□□□□□ -0.97
PTCHD4-201ENST00000339488 RUVBL1Q9Y265 456 aaKnown RBP8.97□□□□□ -0.97
PTCHD4-201ENST00000339488 ZNF337Q9Y3M9 751 aa8.97□□□□□ -0.97
PTCHD4-201ENST00000339488 MMP24Q9Y5R2 645 aa8.97□□□□□ -0.97
PTCHD4-201ENST00000339488 OR2AT4A6NND4 320 aa8.96□□□□□ -0.97
PTCHD4-201ENST00000339488 IQCF3P0C7M6 154 aa8.96□□□□□ -0.97
PTCHD4-201ENST00000339488 RPA2P15927 270 aa8.96□□□□□ -0.97
PTCHD4-201ENST00000339488 SDC1P18827 310 aa8.96□□□□□ -0.97
PTCHD4-201ENST00000339488 RPS10P46783 165 aaKnown RBP8.96□□□□□ -0.97
PTCHD4-201ENST00000339488 CDX1P47902 265 aaPredicted RBP8.96□□□□□ -0.97
PTCHD4-201ENST00000339488 CSNK1EP49674 416 aaKnown RBP8.96□□□□□ -0.97
PTCHD4-201ENST00000339488 GAS1P54826 345 aa8.96□□□□□ -0.97
PTCHD4-201ENST00000339488 GEMP55040 296 aa8.96□□□□□ -0.97
PTCHD4-201ENST00000339488 SNRPGP62308 76 aaKnown RBP8.96□□□□□ -0.97
PTCHD4-201ENST00000339488 SELENOWP63302 87 aa8.96□□□□□ -0.97
PTCHD4-201ENST00000339488 ZNF805Q5CZA5 627 aa8.96□□□□□ -0.97
PTCHD4-201ENST00000339488 SLC22A10Q63ZE4 541 aa8.96□□□□□ -0.97
PTCHD4-201ENST00000339488 GDF6Q6KF10 455 aaPredicted RBP8.96□□□□□ -0.97
PTCHD4-201ENST00000339488 MSANTD1Q6ZTZ1 278 aa8.96□□□□□ -0.97
PTCHD4-201ENST00000339488 LANCL3Q6ZV70 420 aa8.96□□□□□ -0.97
PTCHD4-201ENST00000339488 ZNF227Q86WZ6 799 aa8.96□□□□□ -0.97
PTCHD4-201ENST00000339488 GTPBP8Q8N3Z3 284 aaPredicted RBP8.96□□□□□ -0.97
PTCHD4-201ENST00000339488 FAM71CQ8NEG0 241 aa8.96□□□□□ -0.97
PTCHD4-201ENST00000339488 NFKBIDQ8NI38 313 aa8.96□□□□□ -0.97
PTCHD4-201ENST00000339488 SORCS1Q8WY21 1168 aa8.96□□□□□ -0.97
PTCHD4-201ENST00000339488 ARL11Q969Q4 196 aa8.96□□□□□ -0.97
PTCHD4-201ENST00000339488 JSRP1Q96MG2 331 aaPredicted RBP8.96□□□□□ -0.97
PTCHD4-201ENST00000339488 MTERF1Q99551 399 aaKnown RBP8.96□□□□□ -0.97
PTCHD4-201ENST00000339488 ACPTQ9BZG2 426 aa8.96□□□□□ -0.97
PTCHD4-201ENST00000339488 TPSD1Q9BZJ3 242 aa8.96□□□□□ -0.97
PTCHD4-201ENST00000339488 EPHX3Q9H6B9 360 aa8.96□□□□□ -0.97
PTCHD4-201ENST00000339488 DBNDD1Q9H9R9 158 aa8.96□□□□□ -0.97
PTCHD4-201ENST00000339488 HMX1Q9NP08 348 aaPredicted RBP8.96□□□□□ -0.97
PTCHD4-201ENST00000339488 NT5MQ9NPB1 228 aa8.96□□□□□ -0.97
PTCHD4-201ENST00000339488 DDIT4Q9NX09 232 aa8.96□□□□□ -0.97
PTCHD4-201ENST00000339488 ZSCAN32Q9NX65 697 aa8.96□□□□□ -0.97
PTCHD4-201ENST00000339488 TESQ9UGI8 421 aaKnown RBP8.96□□□□□ -0.97
PTCHD4-201ENST00000339488 CNOT4O95628 575 aaKnown RBP8.96□□□□□ -0.98
PTCHD4-201ENST00000339488 F10P00742 488 aa8.96□□□□□ -0.98
PTCHD4-201ENST00000339488 SBK2P0C263 348 aa8.96□□□□□ -0.98
PTCHD4-201ENST00000339488 C5AR1P21730 350 aa8.96□□□□□ -0.98
PTCHD4-201ENST00000339488 CD1CP29017 333 aa8.96□□□□□ -0.98
PTCHD4-201ENST00000339488 CD80P33681 288 aa8.96□□□□□ -0.98
PTCHD4-201ENST00000339488 ARL2P36404 184 aa8.96□□□□□ -0.98
PTCHD4-201ENST00000339488 MAPK9P45984 424 aa8.96□□□□□ -0.98
PTCHD4-201ENST00000339488 CNTN1Q12860 1018 aa8.96□□□□□ -0.98
PTCHD4-201ENST00000339488 ARHGEF7Q14155 803 aa8.96□□□□□ -0.98
PTCHD4-201ENST00000339488 ARL9Q6T311 187 aa8.96□□□□□ -0.98
PTCHD4-201ENST00000339488 ZNF574Q6ZN55 896 aaPredicted RBP8.96□□□□□ -0.98
PTCHD4-201ENST00000339488 FAM129CQ86XR2 697 aa8.96□□□□□ -0.98
PTCHD4-201ENST00000339488 ZNF280BQ86YH2 543 aa8.96□□□□□ -0.98
PTCHD4-201ENST00000339488 FAM219AQ8IW50 185 aa8.96□□□□□ -0.98
PTCHD4-201ENST00000339488 FBXO15Q8NCQ5 510 aaPredicted RBP8.96□□□□□ -0.98
PTCHD4-201ENST00000339488 OR2AK2Q8NG84 335 aa8.96□□□□□ -0.98
PTCHD4-201ENST00000339488 OR8J1Q8NGP2 316 aa8.96□□□□□ -0.98
PTCHD4-201ENST00000339488 SEC22AQ96IW7 307 aa8.96□□□□□ -0.98
PTCHD4-201ENST00000339488 C5orf34Q96MH7 638 aa8.96□□□□□ -0.98
PTCHD4-201ENST00000339488 TTTY10Q9BZA0 68 aa8.96□□□□□ -0.98
PTCHD4-201ENST00000339488 MFSD1Q9H3U5 465 aa8.96□□□□□ -0.98
PTCHD4-201ENST00000339488 SPACA1Q9HBV2 294 aa8.96□□□□□ -0.98
PTCHD4-201ENST00000339488 GKN1Q9NS71 199 aa8.96□□□□□ -0.98
PTCHD4-201ENST00000339488 PARPBPQ9NWS1 579 aa8.96□□□□□ -0.98
PTCHD4-201ENST00000339488 H2AFY2Q9P0M6 372 aaPredicted RBP8.96□□□□□ -0.98
PTCHD4-201ENST00000339488 A8MVJ9 347 aa8.95□□□□□ -0.98
PTCHD4-201ENST00000339488 FFAR1O14842 300 aa8.95□□□□□ -0.98
PTCHD4-201ENST00000339488 PRAF2O60831 178 aa8.95□□□□□ -0.98
PTCHD4-201ENST00000339488 IFNA10P01566 189 aa8.95□□□□□ -0.98
PTCHD4-201ENST00000339488 BCHEP06276 602 aa8.95□□□□□ -0.98
PTCHD4-201ENST00000339488 LIPCP11150 499 aa8.95□□□□□ -0.98
PTCHD4-201ENST00000339488 OSMP13725 252 aa8.95□□□□□ -0.98
PTCHD4-201ENST00000339488 PTNP21246 168 aa8.95□□□□□ -0.98
PTCHD4-201ENST00000339488 NSG1P42857 185 aa8.95□□□□□ -0.98
PTCHD4-201ENST00000339488 MMP15P51511 669 aa8.95□□□□□ -0.98
PTCHD4-201ENST00000339488 CLEC12AQ5QGZ9 265 aa8.95□□□□□ -0.98
PTCHD4-201ENST00000339488 ELFN2Q5R3F8 820 aa8.95□□□□□ -0.98
PTCHD4-201ENST00000339488 ZNF783Q6ZMS7 281 aa8.95□□□□□ -0.98
PTCHD4-201ENST00000339488 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.95□□□□□ -0.98
PTCHD4-201ENST00000339488 HMGN2P46Q86SG4 172 aa8.95□□□□□ -0.98
PTCHD4-201ENST00000339488 RBM45Q8IUH3 476 aaKnown RBP8.95□□□□□ -0.98
PTCHD4-201ENST00000339488 APIPQ96GX9 242 aa8.95□□□□□ -0.98
PTCHD4-201ENST00000339488 MENTQ9BUN1 341 aa8.95□□□□□ -0.98
PTCHD4-201ENST00000339488 CHST6Q9GZX3 395 aa8.95□□□□□ -0.98
PTCHD4-201ENST00000339488 POLR2J3Q9H1A7 115 aaKnown RBP8.95□□□□□ -0.98
PTCHD4-201ENST00000339488 CDT1Q9H211 546 aa8.95□□□□□ -0.98
PTCHD4-201ENST00000339488 RDH14Q9HBH5 336 aa8.95□□□□□ -0.98
PTCHD4-201ENST00000339488 ELOVL2Q9NXB9 296 aa8.95□□□□□ -0.98
PTCHD4-201ENST00000339488 UXTQ9UBK9 157 aaPredicted RBP8.95□□□□□ -0.98
PTCHD4-201ENST00000339488 OR14J1Q9UGF5 321 aa8.95□□□□□ -0.98
PTCHD4-201ENST00000339488 RLFQ13129 1914 aa8.95□□□□□ -0.98
PTCHD4-201ENST00000339488 GREB1LQ9C091 1923 aaPredicted RBP8.95□□□□□ -0.98
PTCHD4-201ENST00000339488 A8MWP6 167 aa8.95□□□□□ -0.98
PTCHD4-201ENST00000339488 NFKBIEO00221 500 aa8.95□□□□□ -0.98
PTCHD4-201ENST00000339488 UBL3O95164 117 aa8.95□□□□□ -0.98
PTCHD4-201ENST00000339488 NFATC1O95644 943 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms