RNA–Protein interactions for RNA: ENST00000339162.11

PDLIM2-203, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-203ENST00000339162 SEMA4CQ9C0C4 833 aa20.51■□□□□ 0.87
PDLIM2-203ENST00000339162 WWP2O00308 870 aa20.51■□□□□ 0.87
PDLIM2-203ENST00000339162 NDUFB5O43674 189 aa20.51■□□□□ 0.87
PDLIM2-203ENST00000339162 ONECUT2O95948 504 aa20.51■□□□□ 0.87
PDLIM2-203ENST00000339162 BCL10O95999 233 aa20.51■□□□□ 0.87
PDLIM2-203ENST00000339162 MTNR1AP48039 350 aa20.51■□□□□ 0.87
PDLIM2-203ENST00000339162 GAS1P54826 345 aa20.51■□□□□ 0.87
PDLIM2-203ENST00000339162 CDH11P55287 796 aa20.51■□□□□ 0.87
PDLIM2-203ENST00000339162 FHL1Q13642 323 aa20.51■□□□□ 0.87
PDLIM2-203ENST00000339162 SF3A2Q15428 464 aaKnown RBP20.51■□□□□ 0.87
PDLIM2-203ENST00000339162 AADACL4Q5VUY2 407 aa20.51■□□□□ 0.87
PDLIM2-203ENST00000339162 WBP2NLQ6ICG8 309 aa20.51■□□□□ 0.87
PDLIM2-203ENST00000339162 CPEB2Q7Z5Q1 589 aaKnown RBP20.51■□□□□ 0.87
PDLIM2-203ENST00000339162 ZNF563Q8TA94 476 aa20.51■□□□□ 0.87
PDLIM2-203ENST00000339162 MGLLQ99685 303 aa20.51■□□□□ 0.87
PDLIM2-203ENST00000339162 ULBP3Q9BZM4 244 aa20.51■□□□□ 0.87
PDLIM2-203ENST00000339162 ERGIC3Q9Y282 383 aa20.51■□□□□ 0.87
PDLIM2-203ENST00000339162 TRBV11-1A0A0K0K1C0 115 aa20.5■□□□□ 0.87
PDLIM2-203ENST00000339162 SOCS6O14544 535 aa20.5■□□□□ 0.87
PDLIM2-203ENST00000339162 HCN1O60741 890 aa20.5■□□□□ 0.87
PDLIM2-203ENST00000339162 HMGN1P05114 100 aa20.5■□□□□ 0.87
PDLIM2-203ENST00000339162 GRK5P34947 590 aa20.5■□□□□ 0.87
PDLIM2-203ENST00000339162 SLC9A3P48764 834 aa20.5■□□□□ 0.87
PDLIM2-203ENST00000339162 TOMM34Q15785 309 aaPredicted RBP20.5■□□□□ 0.87
PDLIM2-203ENST00000339162 PLBD1Q6P4A8 553 aa20.5■□□□□ 0.87
PDLIM2-203ENST00000339162 IGFN1Q86VF2 1251 aa20.5■□□□□ 0.87
PDLIM2-203ENST00000339162 BPHLQ86WA6 291 aaPredicted RBP20.5■□□□□ 0.87
PDLIM2-203ENST00000339162 MR1Q95460 341 aa20.5■□□□□ 0.87
PDLIM2-203ENST00000339162 LPAR4Q99677 370 aa20.5■□□□□ 0.87
PDLIM2-203ENST00000339162 MCCC2Q9HCC0 563 aa20.5■□□□□ 0.87
PDLIM2-203ENST00000339162 IGKV1D-42A0A075B6H8 117 aa20.5■□□□□ 0.87
PDLIM2-203ENST00000339162 ELOA3DA6NLF2 546 aaPredicted RBP20.5■□□□□ 0.87
PDLIM2-203ENST00000339162 CSO75390 466 aaKnown RBP20.5■□□□□ 0.87
PDLIM2-203ENST00000339162 PPP1R3DO95685 299 aa20.5■□□□□ 0.87
PDLIM2-203ENST00000339162 GADD45AP24522 165 aa20.5■□□□□ 0.87
PDLIM2-203ENST00000339162 ITPKBP27987 946 aa20.5■□□□□ 0.87
PDLIM2-203ENST00000339162 ETV5P41161 510 aa20.5■□□□□ 0.87
PDLIM2-203ENST00000339162 ETV1P50549 477 aa20.5■□□□□ 0.87
PDLIM2-203ENST00000339162 PNLIPRP2P54317 469 aa20.5■□□□□ 0.87
PDLIM2-203ENST00000339162 FOXK2Q01167 660 aa20.5■□□□□ 0.87
PDLIM2-203ENST00000339162 ELOA3BQ3SY89 546 aa20.5■□□□□ 0.87
PDLIM2-203ENST00000339162 PLA2G2CQ5R387 149 aa20.5■□□□□ 0.87
PDLIM2-203ENST00000339162 ZNF367Q7RTV3 350 aa20.5■□□□□ 0.87
PDLIM2-203ENST00000339162 ELOA3Q8NG57 546 aa20.5■□□□□ 0.87
PDLIM2-203ENST00000339162 HCAR1Q9BXC0 346 aa20.5■□□□□ 0.87
PDLIM2-203ENST00000339162 ZC3H12DA2A288 527 aaKnown RBP20.49■□□□□ 0.87
PDLIM2-203ENST00000339162 FAM86C2PA6NEL3 165 aa20.49■□□□□ 0.87
PDLIM2-203ENST00000339162 NUDT14O95848 222 aa20.49■□□□□ 0.87
PDLIM2-203ENST00000339162 GP1BAP07359 652 aa20.49■□□□□ 0.87
PDLIM2-203ENST00000339162 ZNF883P0CG24 379 aa20.49■□□□□ 0.87
PDLIM2-203ENST00000339162 RGS6P49758 472 aa20.49■□□□□ 0.87
PDLIM2-203ENST00000339162 MC2RQ01718 297 aa20.49■□□□□ 0.87
PDLIM2-203ENST00000339162 TSTQ16762 297 aaKnown RBP20.49■□□□□ 0.87
PDLIM2-203ENST00000339162 SOWAHCQ53LP3 525 aaPredicted RBP20.49■□□□□ 0.87
PDLIM2-203ENST00000339162 POMZP3Q6PJE2 187 aa20.49■□□□□ 0.87
PDLIM2-203ENST00000339162 SLC46A3Q7Z3Q1 461 aa20.49■□□□□ 0.87
PDLIM2-203ENST00000339162 LNX2Q8N448 690 aa20.49■□□□□ 0.87
PDLIM2-203ENST00000339162 SGTBQ96EQ0 304 aa20.49■□□□□ 0.87
PDLIM2-203ENST00000339162 DNAJA3Q96EY1 480 aa20.49■□□□□ 0.87
PDLIM2-203ENST00000339162 TAPBPLQ9BX59 468 aa20.49■□□□□ 0.87
PDLIM2-203ENST00000339162 SLC26A1Q9H2B4 701 aa20.49■□□□□ 0.87
PDLIM2-203ENST00000339162 EXOSC3Q9NQT5 275 aaKnown RBP20.49■□□□□ 0.87
PDLIM2-203ENST00000339162 SLC39A1Q9NY26 324 aa20.49■□□□□ 0.87
PDLIM2-203ENST00000339162 NPFFR2Q9Y5X5 522 aa20.49■□□□□ 0.87
PDLIM2-203ENST00000339162 ALG1L2C9J202 215 aa20.49■□□□□ 0.87
PDLIM2-203ENST00000339162 FLRT2O43155 660 aa20.49■□□□□ 0.87
PDLIM2-203ENST00000339162 WISP1O95388 367 aa20.49■□□□□ 0.87
PDLIM2-203ENST00000339162 RAB36O95755 333 aa20.49■□□□□ 0.87
PDLIM2-203ENST00000339162 KLK3P07288 261 aaPredicted RBP20.49■□□□□ 0.87
PDLIM2-203ENST00000339162 FBXW4P57775 412 aa20.49■□□□□ 0.87
PDLIM2-203ENST00000339162 CXXC5Q7LFL8 322 aaKnown RBP20.49■□□□□ 0.87
PDLIM2-203ENST00000339162 ATG4DQ86TL0 474 aaPredicted RBP20.49■□□□□ 0.87
PDLIM2-203ENST00000339162 C17orf47Q8NEP4 570 aa20.49■□□□□ 0.87
PDLIM2-203ENST00000339162 OR4F15Q8NGB8 312 aa20.49■□□□□ 0.87
PDLIM2-203ENST00000339162 LAT2Q9GZY6 243 aa20.49■□□□□ 0.87
PDLIM2-203ENST00000339162 MED17Q9NVC6 651 aa20.49■□□□□ 0.87
PDLIM2-203ENST00000339162 ICAM5Q9UMF0 924 aa20.49■□□□□ 0.87
PDLIM2-203ENST00000339162 DIMT1Q9UNQ2 313 aaKnown RBP20.49■□□□□ 0.87
PDLIM2-203ENST00000339162 LSM2Q9Y333 95 aaKnown RBP20.49■□□□□ 0.87
PDLIM2-203ENST00000339162 C2orf72A6NCS6 295 aa20.48■□□□□ 0.87
PDLIM2-203ENST00000339162 TMEM200CA6NKL6 621 aa20.48■□□□□ 0.87
PDLIM2-203ENST00000339162 EVI2BP34910 448 aa20.48■□□□□ 0.87
PDLIM2-203ENST00000339162 NRG3P56975 720 aa20.48■□□□□ 0.87
PDLIM2-203ENST00000339162 KLHL22Q53GT1 634 aa20.48■□□□□ 0.87
PDLIM2-203ENST00000339162 OR5M10Q6IEU7 315 aa20.48■□□□□ 0.87
PDLIM2-203ENST00000339162 VMP1Q96GC9 406 aa20.48■□□□□ 0.87
PDLIM2-203ENST00000339162 OR51E2Q9H255 320 aa20.48■□□□□ 0.87
PDLIM2-203ENST00000339162 PCDHGA5Q9Y5G8 931 aa20.48■□□□□ 0.87
PDLIM2-203ENST00000339162 PMS2P1A4D2B8 440 aa20.47■□□□□ 0.87
PDLIM2-203ENST00000339162 SNTNA6NMZ2 147 aa20.47■□□□□ 0.87
PDLIM2-203ENST00000339162 AIREO43918 545 aa20.47■□□□□ 0.87
PDLIM2-203ENST00000339162 TACR3P29371 465 aa20.47■□□□□ 0.87
PDLIM2-203ENST00000339162 SOX3P41225 446 aa20.47■□□□□ 0.87
PDLIM2-203ENST00000339162 RPL13AP3Q6NVV1 102 aa20.47■□□□□ 0.87
PDLIM2-203ENST00000339162 TMEM205Q6UW68 189 aa20.47■□□□□ 0.87
PDLIM2-203ENST00000339162 RTL4Q6ZR62 310 aa20.47■□□□□ 0.87
PDLIM2-203ENST00000339162 NANOGP1Q8N7R0 232 aa20.47■□□□□ 0.87
PDLIM2-203ENST00000339162 CYB561A3Q8NBI2 242 aa20.47■□□□□ 0.87
PDLIM2-203ENST00000339162 LOXL4Q96JB6 756 aa20.47■□□□□ 0.87
PDLIM2-203ENST00000339162 FBXO8Q9NRD0 319 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms