RNA–Protein interactions for RNA: ENST00000337299.6

COL2A1-201, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL2A1, Length 4,257 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-201ENST00000337299 MBLAC1A4D2B0 266 aaPredicted RBP12.37□□□□□ -0.43
COL2A1-201ENST00000337299 POM121BA6NF01 834 aa12.37□□□□□ -0.43
COL2A1-201ENST00000337299 WASH4PA8MWX3 477 aa12.37□□□□□ -0.43
COL2A1-201ENST00000337299 NPC1O15118 1278 aa12.37□□□□□ -0.43
COL2A1-201ENST00000337299 LPLP06858 475 aa12.37□□□□□ -0.43
COL2A1-201ENST00000337299 CCL5P13501 91 aa12.37□□□□□ -0.43
COL2A1-201ENST00000337299 LAG3P18627 525 aa12.37□□□□□ -0.43
COL2A1-201ENST00000337299 ADH6P28332 368 aa12.37□□□□□ -0.43
COL2A1-201ENST00000337299 RBMS2Q15434 407 aaKnown RBP12.37□□□□□ -0.43
COL2A1-201ENST00000337299 FER1L6Q2WGJ9 1857 aa12.37□□□□□ -0.43
COL2A1-201ENST00000337299 ZNF385BQ569K4 471 aa12.37□□□□□ -0.43
COL2A1-201ENST00000337299 TPRA1Q86W33 373 aa12.37□□□□□ -0.43
COL2A1-201ENST00000337299 ZNF248Q8NDW4 579 aa12.37□□□□□ -0.43
COL2A1-201ENST00000337299 DNAAF1Q8NEP3 725 aa12.37□□□□□ -0.43
COL2A1-201ENST00000337299 DPH7Q9BTV6 452 aa12.37□□□□□ -0.43
COL2A1-201ENST00000337299 RETREG1Q9H6L5 497 aa12.37□□□□□ -0.43
COL2A1-201ENST00000337299 KLK11Q9UBX7 282 aa12.37□□□□□ -0.43
COL2A1-201ENST00000337299 CAMK2AQ9UQM7 478 aa12.37□□□□□ -0.43
COL2A1-201ENST00000337299 GGT3PA6NGU5 568 aa12.37□□□□□ -0.43
COL2A1-201ENST00000337299 MED6O75586 246 aa12.37□□□□□ -0.43
COL2A1-201ENST00000337299 CFDP00746 253 aaPredicted RBP12.37□□□□□ -0.43
COL2A1-201ENST00000337299 IFNA17P01571 189 aa12.37□□□□□ -0.43
COL2A1-201ENST00000337299 GALTP07902 379 aa12.37□□□□□ -0.43
COL2A1-201ENST00000337299 AKAIN1P0CW23 69 aa12.37□□□□□ -0.43
COL2A1-201ENST00000337299 CPT2P23786 658 aa12.37□□□□□ -0.43
COL2A1-201ENST00000337299 TPBGQ13641 420 aa12.37□□□□□ -0.43
COL2A1-201ENST00000337299 ARHGAP40Q5TG30 622 aa12.37□□□□□ -0.43
COL2A1-201ENST00000337299 HACD4Q5VWC8 232 aa12.37□□□□□ -0.43
COL2A1-201ENST00000337299 FAM124AQ86V42 546 aa12.37□□□□□ -0.43
COL2A1-201ENST00000337299 FAM26EQ8N5C1 309 aa12.37□□□□□ -0.43
COL2A1-201ENST00000337299 LILRA3Q8N6C8 439 aaPredicted RBP12.37□□□□□ -0.43
COL2A1-201ENST00000337299 KREMEN2Q8NCW0 462 aa12.37□□□□□ -0.43
COL2A1-201ENST00000337299 HS6ST2Q96MM7 605 aa12.37□□□□□ -0.43
COL2A1-201ENST00000337299 C1QTNF3Q9BXJ4 246 aa12.37□□□□□ -0.43
COL2A1-201ENST00000337299 ISG20L2Q9H9L3 353 aaKnown RBP12.37□□□□□ -0.43
COL2A1-201ENST00000337299 CSNK1G1Q9HCP0 422 aa12.37□□□□□ -0.43
COL2A1-201ENST00000337299 HCSTQ9UBK5 93 aa12.37□□□□□ -0.43
COL2A1-201ENST00000337299 GPR89AB7ZAQ6 455 aa12.37□□□□□ -0.43
COL2A1-201ENST00000337299 EGFP01133 1207 aa12.37□□□□□ -0.43
COL2A1-201ENST00000337299 IFNA21P01568 189 aa12.37□□□□□ -0.43
COL2A1-201ENST00000337299 GPR89BP0CG08 455 aa12.37□□□□□ -0.43
COL2A1-201ENST00000337299 CAMLGP49069 296 aa12.37□□□□□ -0.43
COL2A1-201ENST00000337299 MEOX2P50222 304 aa12.37□□□□□ -0.43
COL2A1-201ENST00000337299 TAS2R38P59533 333 aa12.37□□□□□ -0.43
COL2A1-201ENST00000337299 CCNJQ5T5M9 372 aa12.37□□□□□ -0.43
COL2A1-201ENST00000337299 PRICKLE2Q7Z3G6 844 aa12.37□□□□□ -0.43
COL2A1-201ENST00000337299 TMEM99Q8N816 258 aa12.37□□□□□ -0.43
COL2A1-201ENST00000337299 NAXEQ8NCW5 288 aa12.37□□□□□ -0.43
COL2A1-201ENST00000337299 OR5T3Q8NGG3 340 aa12.37□□□□□ -0.43
COL2A1-201ENST00000337299 PCM1Q15154 2024 aa12.36□□□□□ -0.43
COL2A1-201ENST00000337299 USP54Q70EL1 1684 aa12.36□□□□□ -0.43
COL2A1-201ENST00000337299 A0A0A6YYH2 397 aa12.36□□□□□ -0.43
COL2A1-201ENST00000337299 A6NJ64 397 aa12.36□□□□□ -0.43
COL2A1-201ENST00000337299 HHLA1C9JL84 531 aa12.36□□□□□ -0.43
COL2A1-201ENST00000337299 SELENOPP49908 381 aa12.36□□□□□ -0.43
COL2A1-201ENST00000337299 ACTA2P62736 377 aa12.36□□□□□ -0.43
COL2A1-201ENST00000337299 ACTG2P63267 376 aa12.36□□□□□ -0.43
COL2A1-201ENST00000337299 TSPAN31Q12999 210 aa12.36□□□□□ -0.43
COL2A1-201ENST00000337299 TTLQ8NG68 377 aa12.36□□□□□ -0.43
COL2A1-201ENST00000337299 SULT4A1Q9BR01 284 aa12.36□□□□□ -0.43
COL2A1-201ENST00000337299 NOX4Q9NPH5 578 aa12.36□□□□□ -0.43
COL2A1-201ENST00000337299 DPP7Q9UHL4 492 aa12.36□□□□□ -0.43
COL2A1-201ENST00000337299 SLC16A5O15375 505 aa12.36□□□□□ -0.43
COL2A1-201ENST00000337299 ADAM12O43184 909 aa12.36□□□□□ -0.43
COL2A1-201ENST00000337299 ZNF623O75123 536 aa12.36□□□□□ -0.43
COL2A1-201ENST00000337299 SOD1P00441 154 aa12.36□□□□□ -0.43
COL2A1-201ENST00000337299 GIPP09681 153 aaPredicted RBP12.36□□□□□ -0.43
COL2A1-201ENST00000337299 SLC35G6P0C7Q6 338 aa12.36□□□□□ -0.43
COL2A1-201ENST00000337299 CSF2RAP15509 400 aa12.36□□□□□ -0.43
COL2A1-201ENST00000337299 MC3RP41968 323 aa12.36□□□□□ -0.43
COL2A1-201ENST00000337299 SPINT3P49223 89 aa12.36□□□□□ -0.43
COL2A1-201ENST00000337299 ACTBP60709 375 aa12.36□□□□□ -0.43
COL2A1-201ENST00000337299 ACTG1P63261 375 aa12.36□□□□□ -0.43
COL2A1-201ENST00000337299 ENTPD8Q5MY95 495 aa12.36□□□□□ -0.43
COL2A1-201ENST00000337299 NHLRC1Q6VVB1 395 aa12.36□□□□□ -0.43
COL2A1-201ENST00000337299 LRRTM1Q86UE6 522 aa12.36□□□□□ -0.43
COL2A1-201ENST00000337299 GLYATL1Q969I3 302 aa12.36□□□□□ -0.43
COL2A1-201ENST00000337299 SLC25A44Q96H78 314 aaPredicted RBP12.36□□□□□ -0.43
COL2A1-201ENST00000337299 GAS2L1Q99501 681 aaPredicted RBP12.36□□□□□ -0.43
COL2A1-201ENST00000337299 TCEAL2Q9H3H9 227 aaPredicted RBP12.36□□□□□ -0.43
COL2A1-201ENST00000337299 SYNDIG1Q9H7V2 258 aa12.36□□□□□ -0.43
COL2A1-201ENST00000337299 KCNJ16Q9NPI9 418 aa12.36□□□□□ -0.43
COL2A1-201ENST00000337299 GFOD1Q9NXC2 390 aa12.36□□□□□ -0.43
COL2A1-201ENST00000337299 FBXL21Q9UKT6 434 aa12.36□□□□□ -0.43
COL2A1-201ENST00000337299 ADAMTS7Q9UKP4 1686 aa12.36□□□□□ -0.43
COL2A1-201ENST00000337299 TMEM82A0PJX8 343 aa12.36□□□□□ -0.43
COL2A1-201ENST00000337299 TRAPPC13A5PLN9 417 aa12.36□□□□□ -0.43
COL2A1-201ENST00000337299 ZNF736B4DX44 427 aaPredicted RBP12.36□□□□□ -0.43
COL2A1-201ENST00000337299 M0QYG6 137 aa12.36□□□□□ -0.43
COL2A1-201ENST00000337299 LATS1O95835 1130 aa12.36□□□□□ -0.43
COL2A1-201ENST00000337299 RENP00797 406 aa12.36□□□□□ -0.43
COL2A1-201ENST00000337299 CTSCP53634 463 aa12.36□□□□□ -0.43
COL2A1-201ENST00000337299 HCCSP53701 268 aa12.36□□□□□ -0.43
COL2A1-201ENST00000337299 NDUFA6P56556 154 aa12.36□□□□□ -0.43
COL2A1-201ENST00000337299 C21orf62-AS1Q17RA5 79 aa12.36□□□□□ -0.43
COL2A1-201ENST00000337299 CBLN2Q8IUK8 224 aa12.36□□□□□ -0.43
COL2A1-201ENST00000337299 OR51S1Q8NGJ8 323 aa12.36□□□□□ -0.43
COL2A1-201ENST00000337299 TMED6Q8WW62 240 aa12.36□□□□□ -0.43
COL2A1-201ENST00000337299 WDR89Q96FK6 387 aaPredicted RBP12.36□□□□□ -0.43
COL2A1-201ENST00000337299 C16orf58Q96GQ5 468 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms