RNA–Protein interactions for RNA: ENST00000336873.9

HPS4-201, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HPS4, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-201ENST00000336873 AGBL4Q5VU57 503 aa7.64□□□□□ -1.19
HPS4-201ENST00000336873 FAM180AQ6UWF9 173 aa7.64□□□□□ -1.19
HPS4-201ENST00000336873 GPAT4Q86UL3 456 aa7.64□□□□□ -1.19
HPS4-201ENST00000336873 OR13H1Q8NG92 308 aa7.64□□□□□ -1.19
HPS4-201ENST00000336873 NSMAFQ92636 917 aa7.64□□□□□ -1.19
HPS4-201ENST00000336873 ZNF775Q96BV0 537 aaPredicted RBP7.64□□□□□ -1.19
HPS4-201ENST00000336873 Q9N2J8 555 aa7.64□□□□□ -1.19
HPS4-201ENST00000336873 PRDM9Q9NQV7 894 aa7.64□□□□□ -1.19
HPS4-201ENST00000336873 CNOT2Q9NZN8 540 aaKnown RBP7.64□□□□□ -1.19
HPS4-201ENST00000336873 FTSJ1Q9UET6 329 aa7.64□□□□□ -1.19
HPS4-201ENST00000336873 MGAT4AQ9UM21 535 aa7.64□□□□□ -1.19
HPS4-201ENST00000336873 EXOSC1Q9Y3B2 195 aaKnown RBP7.64□□□□□ -1.19
HPS4-201ENST00000336873 NOTCH4Q99466 2003 aa7.64□□□□□ -1.19
HPS4-201ENST00000336873 TMEM72A0PK05 275 aa7.64□□□□□ -1.19
HPS4-201ENST00000336873 DCDC2BA2VCK2 349 aa7.64□□□□□ -1.19
HPS4-201ENST00000336873 SOBPA7XYQ1 873 aa7.64□□□□□ -1.19
HPS4-201ENST00000336873 C4orf51C9J302 202 aa7.64□□□□□ -1.19
HPS4-201ENST00000336873 H3BML4 177 aa7.64□□□□□ -1.19
HPS4-201ENST00000336873 SCO1O75880 301 aa7.64□□□□□ -1.19
HPS4-201ENST00000336873 SPARCP09486 303 aa7.64□□□□□ -1.19
HPS4-201ENST00000336873 CISD3P0C7P0 127 aa7.64□□□□□ -1.19
HPS4-201ENST00000336873 ELK1P19419 428 aa7.64□□□□□ -1.19
HPS4-201ENST00000336873 HTR3AP46098 478 aa7.64□□□□□ -1.19
HPS4-201ENST00000336873 CTXN1P60606 82 aa7.64□□□□□ -1.19
HPS4-201ENST00000336873 PSPHP78330 225 aa7.64□□□□□ -1.19
HPS4-201ENST00000336873 RHAGQ02094 409 aa7.64□□□□□ -1.19
HPS4-201ENST00000336873 POU4F3Q15319 338 aa7.64□□□□□ -1.19
HPS4-201ENST00000336873 NDUFA9Q16795 377 aa7.64□□□□□ -1.19
HPS4-201ENST00000336873 TMEM196Q5HYL7 178 aa7.64□□□□□ -1.19
HPS4-201ENST00000336873 UBE3DQ7Z6J8 389 aa7.64□□□□□ -1.19
HPS4-201ENST00000336873 CLDN22Q8N7P3 220 aa7.64□□□□□ -1.19
HPS4-201ENST00000336873 OR2T35Q8NGX2 323 aa7.64□□□□□ -1.19
HPS4-201ENST00000336873 OR4Q3Q8NH05 313 aa7.64□□□□□ -1.19
HPS4-201ENST00000336873 LILRB4Q8NHJ6 448 aa7.64□□□□□ -1.19
HPS4-201ENST00000336873 RAB7BQ96AH8 199 aa7.64□□□□□ -1.19
HPS4-201ENST00000336873 MSANTD3Q96H12 275 aa7.64□□□□□ -1.19
HPS4-201ENST00000336873 CCDC120Q96HB5 630 aa7.64□□□□□ -1.19
HPS4-201ENST00000336873 PITX2Q99697 317 aa7.64□□□□□ -1.19
HPS4-201ENST00000336873 POLDIP3Q9BY77 421 aaKnown RBP7.64□□□□□ -1.19
HPS4-201ENST00000336873 BABAM2Q9NXR7 383 aa7.64□□□□□ -1.19
HPS4-201ENST00000336873 VDAC3Q9Y277 283 aa7.64□□□□□ -1.19
HPS4-201ENST00000336873 ZNF318Q5VUA4 2279 aa7.64□□□□□ -1.19
HPS4-201ENST00000336873 IGHV3-20A0A0C4DH32 117 aa7.63□□□□□ -1.19
HPS4-201ENST00000336873 TEX13CA0A0J9YWL9 993 aa7.63□□□□□ -1.19
HPS4-201ENST00000336873 CDHR4A6H8M9 788 aa7.63□□□□□ -1.19
HPS4-201ENST00000336873 H3BUI4 141 aa7.63□□□□□ -1.19
HPS4-201ENST00000336873 P2RX6O15547 441 aa7.63□□□□□ -1.19
HPS4-201ENST00000336873 KLHL18O94889 574 aa7.63□□□□□ -1.19
HPS4-201ENST00000336873 APBB3O95704 486 aa7.63□□□□□ -1.19
HPS4-201ENST00000336873 UGT2B7P16662 529 aa7.63□□□□□ -1.19
HPS4-201ENST00000336873 RAB3BP20337 219 aa7.63□□□□□ -1.19
HPS4-201ENST00000336873 OPRD1P41143 372 aa7.63□□□□□ -1.19
HPS4-201ENST00000336873 KIR2DL3P43628 341 aa7.63□□□□□ -1.19
HPS4-201ENST00000336873 TSPAN31Q12999 210 aa7.63□□□□□ -1.19
HPS4-201ENST00000336873 MAB21L1Q13394 359 aa7.63□□□□□ -1.19
HPS4-201ENST00000336873 SHHQ15465 462 aa7.63□□□□□ -1.19
HPS4-201ENST00000336873 THSD4Q6ZMP0 1018 aa7.63□□□□□ -1.19
HPS4-201ENST00000336873 NDUFAF7Q7L592 441 aa7.63□□□□□ -1.19
HPS4-201ENST00000336873 ZAR1Q86SH2 424 aa7.63□□□□□ -1.19
HPS4-201ENST00000336873 NOXA1Q86UR1 476 aa7.63□□□□□ -1.19
HPS4-201ENST00000336873 KIF18BQ86Y91 864 aa7.63□□□□□ -1.19
HPS4-201ENST00000336873 TP53I13Q8NBR0 393 aaPredicted RBP7.63□□□□□ -1.19
HPS4-201ENST00000336873 OR4M1Q8NGD0 313 aa7.63□□□□□ -1.19
HPS4-201ENST00000336873 ZNF566Q969W8 418 aa7.63□□□□□ -1.19
HPS4-201ENST00000336873 FAM46BQ96A09 425 aa7.63□□□□□ -1.19
HPS4-201ENST00000336873 ZNF707Q96C28 371 aaPredicted RBP7.63□□□□□ -1.19
HPS4-201ENST00000336873 TBL1XR1Q9BZK7 514 aa7.63□□□□□ -1.19
HPS4-201ENST00000336873 PRTFDC1Q9NRG1 225 aa7.63□□□□□ -1.19
HPS4-201ENST00000336873 CPNE7Q9UBL6 633 aa7.63□□□□□ -1.19
HPS4-201ENST00000336873 FLVCR2Q9UPI3 526 aa7.63□□□□□ -1.19
HPS4-201ENST00000336873 LIPT1Q9Y234 373 aa7.63□□□□□ -1.19
HPS4-201ENST00000336873 A0A1W2PRQ8 180 aa7.63□□□□□ -1.19
HPS4-201ENST00000336873 HYKKA2RU49 373 aa7.63□□□□□ -1.19
HPS4-201ENST00000336873 RHPN2P1A8MT19 583 aa7.63□□□□□ -1.19
HPS4-201ENST00000336873 HRKO00198 91 aa7.63□□□□□ -1.19
HPS4-201ENST00000336873 FABP7O15540 132 aa7.63□□□□□ -1.19
HPS4-201ENST00000336873 PRICKLE3O43900 615 aaPredicted RBP7.63□□□□□ -1.19
HPS4-201ENST00000336873 SELENOFO60613 162 aa7.63□□□□□ -1.19
HPS4-201ENST00000336873 KDM4BO94953 1096 aa7.63□□□□□ -1.19
HPS4-201ENST00000336873 CTSBP07858 339 aa7.63□□□□□ -1.19
HPS4-201ENST00000336873 F3P13726 295 aa7.63□□□□□ -1.19
HPS4-201ENST00000336873 AQP2P41181 271 aa7.63□□□□□ -1.19
HPS4-201ENST00000336873 CRYBB2P43320 205 aa7.63□□□□□ -1.19
HPS4-201ENST00000336873 SNRPNP63162 240 aaKnown RBP7.63□□□□□ -1.19
HPS4-201ENST00000336873 PRKCDQ05655 676 aa7.63□□□□□ -1.19
HPS4-201ENST00000336873 LGALS3BPQ08380 585 aa7.63□□□□□ -1.19
HPS4-201ENST00000336873 SLC25A35Q3KQZ1 300 aa7.63□□□□□ -1.19
HPS4-201ENST00000336873 C4orf46Q504U0 113 aa7.63□□□□□ -1.19
HPS4-201ENST00000336873 ZNF836Q6ZNA1 936 aa7.63□□□□□ -1.19
HPS4-201ENST00000336873 HIST2H2ABQ8IUE6 130 aaPredicted RBP7.63□□□□□ -1.19
HPS4-201ENST00000336873 THAP4Q8WY91 577 aa7.63□□□□□ -1.19
HPS4-201ENST00000336873 TOE1Q96GM8 510 aaKnown RBP7.63□□□□□ -1.19
HPS4-201ENST00000336873 MS4A4EQ96PG1 132 aa7.63□□□□□ -1.19
HPS4-201ENST00000336873 SDF2Q99470 211 aa7.63□□□□□ -1.19
HPS4-201ENST00000336873 MAP3K3Q99759 626 aa7.63□□□□□ -1.19
HPS4-201ENST00000336873 RAB11FIP5Q9BXF6 653 aa7.63□□□□□ -1.19
HPS4-201ENST00000336873 PINK1Q9BXM7 581 aa7.63□□□□□ -1.19
HPS4-201ENST00000336873 MCOLN1Q9GZU1 580 aa7.63□□□□□ -1.19
HPS4-201ENST00000336873 LRIT1Q9P2V4 623 aa7.63□□□□□ -1.19
HPS4-201ENST00000336873 PHF11Q9UIL8 331 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms