RNA–Protein interactions for RNA: ENST00000336128.11

ZNF548-201, Transcript of zinc finger protein 548, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ZNF548, Length 2,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-201ENST00000336128 SH3YL1Q96HL8 342 aaPredicted RBP11.39□□□□□ -0.59
ZNF548-201ENST00000336128 LOXL4Q96JB6 756 aa11.39□□□□□ -0.59
ZNF548-201ENST00000336128 OPALINQ96PE5 141 aa11.39□□□□□ -0.59
ZNF548-201ENST00000336128 KLHDC3Q9BQ90 382 aa11.39□□□□□ -0.59
ZNF548-201ENST00000336128 WDR77Q9BQA1 342 aaPredicted RBP11.39□□□□□ -0.59
ZNF548-201ENST00000336128 TAPBPLQ9BX59 468 aa11.39□□□□□ -0.59
ZNF548-201ENST00000336128 PPIEQ9UNP9 301 aaKnown RBP11.39□□□□□ -0.59
ZNF548-201ENST00000336128 BAIAP2Q9UQB8 552 aa11.39□□□□□ -0.59
ZNF548-201ENST00000336128 USP34Q70CQ2 3546 aa11.38□□□□□ -0.59
ZNF548-201ENST00000336128 IGKV1D-42A0A075B6H8 117 aa11.38□□□□□ -0.59
ZNF548-201ENST00000336128 FAM86C2PA6NEL3 165 aa11.38□□□□□ -0.59
ZNF548-201ENST00000336128 ALG1L2C9J202 215 aa11.38□□□□□ -0.59
ZNF548-201ENST00000336128 PPM1BO75688 479 aa11.38□□□□□ -0.59
ZNF548-201ENST00000336128 PPP1R3DO95685 299 aa11.38□□□□□ -0.59
ZNF548-201ENST00000336128 GP1BAP07359 652 aa11.38□□□□□ -0.59
ZNF548-201ENST00000336128 PNMTP11086 282 aa11.38□□□□□ -0.59
ZNF548-201ENST00000336128 CCL4P13236 92 aa11.38□□□□□ -0.59
ZNF548-201ENST00000336128 HTR1FP30939 366 aa11.38□□□□□ -0.59
ZNF548-201ENST00000336128 ETV5P41161 510 aa11.38□□□□□ -0.59
ZNF548-201ENST00000336128 SLC6A8P48029 635 aa11.38□□□□□ -0.59
ZNF548-201ENST00000336128 ETV1P50549 477 aa11.38□□□□□ -0.59
ZNF548-201ENST00000336128 FOXK2Q01167 660 aa11.38□□□□□ -0.59
ZNF548-201ENST00000336128 MC2RQ01718 297 aa11.38□□□□□ -0.59
ZNF548-201ENST00000336128 MRPL14Q6P1L8 145 aaKnown RBP11.38□□□□□ -0.59
ZNF548-201ENST00000336128 PLBD1Q6P4A8 553 aa11.38□□□□□ -0.59
ZNF548-201ENST00000336128 SHFQ7M4L6 423 aa11.38□□□□□ -0.59
ZNF548-201ENST00000336128 SLC43A2Q8N370 569 aa11.38□□□□□ -0.59
ZNF548-201ENST00000336128 PROKR2Q8NFJ6 384 aa11.38□□□□□ -0.59
ZNF548-201ENST00000336128 RHBDD1Q8TEB9 315 aa11.38□□□□□ -0.59
ZNF548-201ENST00000336128 VMP1Q96GC9 406 aa11.38□□□□□ -0.59
ZNF548-201ENST00000336128 TBL1XR1Q9BZK7 514 aa11.38□□□□□ -0.59
ZNF548-201ENST00000336128 RACGAP1Q9H0H5 632 aa11.38□□□□□ -0.59
ZNF548-201ENST00000336128 FN3KQ9H479 309 aa11.38□□□□□ -0.59
ZNF548-201ENST00000336128 AKIRIN1Q9H9L7 192 aaPredicted RBP11.38□□□□□ -0.59
ZNF548-201ENST00000336128 CMC2Q9NRP2 79 aa11.38□□□□□ -0.59
ZNF548-201ENST00000336128 PCDHGA3Q9Y5H0 932 aa11.38□□□□□ -0.59
ZNF548-201ENST00000336128 TRBV11-1A0A0K0K1C0 115 aa11.38□□□□□ -0.59
ZNF548-201ENST00000336128 FAM183AA6NL82 134 aa11.38□□□□□ -0.59
ZNF548-201ENST00000336128 M0R3G1 203 aa11.38□□□□□ -0.59
ZNF548-201ENST00000336128 NDUFB5O43674 189 aa11.38□□□□□ -0.59
ZNF548-201ENST00000336128 OR7A10O76100 309 aa11.38□□□□□ -0.59
ZNF548-201ENST00000336128 MYL12AP19105 171 aa11.38□□□□□ -0.59
ZNF548-201ENST00000336128 MST1P26927 711 aa11.38□□□□□ -0.59
ZNF548-201ENST00000336128 TGFBR1P36897 503 aa11.38□□□□□ -0.59
ZNF548-201ENST00000336128 CLK1P49759 484 aaKnown RBP11.38□□□□□ -0.59
ZNF548-201ENST00000336128 SPHARQ15513 63 aa11.38□□□□□ -0.59
ZNF548-201ENST00000336128 NIPAL3Q6P499 406 aa11.38□□□□□ -0.59
ZNF548-201ENST00000336128 TMEM205Q6UW68 189 aa11.38□□□□□ -0.59
ZNF548-201ENST00000336128 DBX2Q6ZNG2 339 aa11.38□□□□□ -0.59
ZNF548-201ENST00000336128 C16orf47Q6ZP98 133 aaPredicted RBP11.38□□□□□ -0.59
ZNF548-201ENST00000336128 ZBTB46Q86UZ6 589 aa11.38□□□□□ -0.59
ZNF548-201ENST00000336128 GID4Q8IVV7 300 aa11.38□□□□□ -0.59
ZNF548-201ENST00000336128 PMEPA1Q969W9 287 aa11.38□□□□□ -0.59
ZNF548-201ENST00000336128 OTULINQ96BN8 352 aa11.38□□□□□ -0.59
ZNF548-201ENST00000336128 ZNF524Q96C55 264 aa11.38□□□□□ -0.59
ZNF548-201ENST00000336128 LPAR4Q99677 370 aa11.38□□□□□ -0.59
ZNF548-201ENST00000336128 SLC19A3Q9BZV2 496 aa11.38□□□□□ -0.59
ZNF548-201ENST00000336128 OR51E2Q9H255 320 aa11.38□□□□□ -0.59
ZNF548-201ENST00000336128 H2AFY2Q9P0M6 372 aaPredicted RBP11.38□□□□□ -0.59
ZNF548-201ENST00000336128 C19orf25Q9UFG5 118 aaPredicted RBP11.38□□□□□ -0.59
ZNF548-201ENST00000336128 GPN3Q9UHW5 284 aaPredicted RBP11.38□□□□□ -0.59
ZNF548-201ENST00000336128 EXOSC1Q9Y3B2 195 aaKnown RBP11.38□□□□□ -0.59
ZNF548-201ENST00000336128 PCDHGA5Q9Y5G8 931 aa11.38□□□□□ -0.59
ZNF548-201ENST00000336128 ZDBF2Q9HCK1 2354 aa11.37□□□□□ -0.59
ZNF548-201ENST00000336128 C17orf51A8MQB3 221 aa11.37□□□□□ -0.59
ZNF548-201ENST00000336128 LRRN3E7EW58 273 aa11.37□□□□□ -0.59
ZNF548-201ENST00000336128 CCRL2O00421 344 aa11.37□□□□□ -0.59
ZNF548-201ENST00000336128 FLRT2O43155 660 aa11.37□□□□□ -0.59
ZNF548-201ENST00000336128 HCRTR2O43614 444 aa11.37□□□□□ -0.59
ZNF548-201ENST00000336128 SCO2O43819 266 aa11.37□□□□□ -0.59
ZNF548-201ENST00000336128 GMFGO60234 142 aa11.37□□□□□ -0.59
ZNF548-201ENST00000336128 FADS1O60427 444 aa11.37□□□□□ -0.59
ZNF548-201ENST00000336128 EIF4E2O60573 245 aaKnown RBP11.37□□□□□ -0.59
ZNF548-201ENST00000336128 CLPXO76031 633 aa11.37□□□□□ -0.59
ZNF548-201ENST00000336128 SCG5P05408 212 aa11.37□□□□□ -0.59
ZNF548-201ENST00000336128 CYC1P08574 325 aa11.37□□□□□ -0.59
ZNF548-201ENST00000336128 EVI2BP34910 448 aa11.37□□□□□ -0.59
ZNF548-201ENST00000336128 SLC9A3P48764 834 aa11.37□□□□□ -0.59
ZNF548-201ENST00000336128 NRG3P56975 720 aa11.37□□□□□ -0.59
ZNF548-201ENST00000336128 SSX1Q16384 188 aa11.37□□□□□ -0.59
ZNF548-201ENST00000336128 FCRLBQ6BAA4 426 aa11.37□□□□□ -0.59
ZNF548-201ENST00000336128 RTL4Q6ZR62 310 aa11.37□□□□□ -0.59
ZNF548-201ENST00000336128 LRRC17Q8N6Y2 441 aa11.37□□□□□ -0.59
ZNF548-201ENST00000336128 ZNF563Q8TA94 476 aa11.37□□□□□ -0.59
ZNF548-201ENST00000336128 NUBPLQ8TB37 319 aa11.37□□□□□ -0.59
ZNF548-201ENST00000336128 DYNC2LI1Q8TCX1 351 aa11.37□□□□□ -0.59
ZNF548-201ENST00000336128 C8orf44Q96CB5 159 aa11.37□□□□□ -0.59
ZNF548-201ENST00000336128 TMEM43Q9BTV4 400 aa11.37□□□□□ -0.59
ZNF548-201ENST00000336128 MED20Q9H944 212 aa11.37□□□□□ -0.59
ZNF548-201ENST00000336128 ZBTB20Q9HC78 741 aaPredicted RBP11.37□□□□□ -0.59
ZNF548-201ENST00000336128 CHCHD3Q9NX63 227 aaKnown RBP11.37□□□□□ -0.59
ZNF548-201ENST00000336128 SEC16AO15027 2179 aa11.36□□□□□ -0.59
ZNF548-201ENST00000336128 LNP1A1A4G5 178 aa11.36□□□□□ -0.59
ZNF548-201ENST00000336128 OR6C70A6NIJ9 312 aa11.36□□□□□ -0.59
ZNF548-201ENST00000336128 RIIAD1A6NNX1 92 aa11.36□□□□□ -0.59
ZNF548-201ENST00000336128 NDUFB2O95178 105 aa11.36□□□□□ -0.59
ZNF548-201ENST00000336128 ENDOUP21128 410 aaKnown RBP11.36□□□□□ -0.59
ZNF548-201ENST00000336128 SLC26A5P58743 744 aa11.36□□□□□ -0.59
ZNF548-201ENST00000336128 C1DQ13901 141 aaKnown RBP11.36□□□□□ -0.59
ZNF548-201ENST00000336128 ARHGAP11AQ6P4F7 1023 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms