RNA–Protein interactions for RNA: ENST00000335725.8

TDP1-201, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 3,702 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-201ENST00000335725 NETO1Q8TDF5 533 aa8.03□□□□□ -1.12
TDP1-201ENST00000335725 MVB12AQ96EY5 273 aa8.03□□□□□ -1.12
TDP1-201ENST00000335725 SMIM8Q96KF7 97 aa8.03□□□□□ -1.12
TDP1-201ENST00000335725 ALKBH3Q96Q83 286 aaPredicted RBP8.03□□□□□ -1.12
TDP1-201ENST00000335725 LRRN3Q9H3W5 708 aa8.03□□□□□ -1.12
TDP1-201ENST00000335725 TMEM269A0A1B0GVZ9 245 aa8.02□□□□□ -1.13
TDP1-201ENST00000335725 C9J4A7 227 aa8.02□□□□□ -1.13
TDP1-201ENST00000335725 RPP40O75818 363 aaKnown RBP8.02□□□□□ -1.13
TDP1-201ENST00000335725 OR2J2O76002 312 aa8.02□□□□□ -1.13
TDP1-201ENST00000335725 RLN1P04808 185 aa8.02□□□□□ -1.13
TDP1-201ENST00000335725 GJB1P08034 283 aa8.02□□□□□ -1.13
TDP1-201ENST00000335725 SFTA3P0C7M3 94 aa8.02□□□□□ -1.13
TDP1-201ENST00000335725 PRR35P0CG20 571 aa8.02□□□□□ -1.13
TDP1-201ENST00000335725 FABP4P15090 132 aa8.02□□□□□ -1.13
TDP1-201ENST00000335725 TYRP1P17643 537 aa8.02□□□□□ -1.13
TDP1-201ENST00000335725 PSMB6P28072 239 aa8.02□□□□□ -1.13
TDP1-201ENST00000335725 ZNF84P51523 738 aa8.02□□□□□ -1.13
TDP1-201ENST00000335725 NRG3P56975 720 aa8.02□□□□□ -1.13
TDP1-201ENST00000335725 ARF6P62330 175 aa8.02□□□□□ -1.13
TDP1-201ENST00000335725 RPL19P84098 196 aaKnown RBP8.02□□□□□ -1.13
TDP1-201ENST00000335725 SHC2P98077 582 aa8.02□□□□□ -1.13
TDP1-201ENST00000335725 SRSF5Q13243 272 aaKnown RBP8.02□□□□□ -1.13
TDP1-201ENST00000335725 SLC14A1Q13336 389 aa8.02□□□□□ -1.13
TDP1-201ENST00000335725 RAB6CQ53S08 254 aa8.02□□□□□ -1.13
TDP1-201ENST00000335725 Q5PR19 223 aa8.02□□□□□ -1.13
TDP1-201ENST00000335725 PRAMEF20Q5VT98 475 aa8.02□□□□□ -1.13
TDP1-201ENST00000335725 PGBD2Q6P3X8 592 aa8.02□□□□□ -1.13
TDP1-201ENST00000335725 VWA1Q6PCB0 445 aa8.02□□□□□ -1.13
TDP1-201ENST00000335725 LDB1Q86U70 411 aaPredicted RBP8.02□□□□□ -1.13
TDP1-201ENST00000335725 ZNF546Q86UE3 836 aa8.02□□□□□ -1.13
TDP1-201ENST00000335725 TMEM104Q8NE00 496 aa8.02□□□□□ -1.13
TDP1-201ENST00000335725 OR2A12Q8NGT7 310 aa8.02□□□□□ -1.13
TDP1-201ENST00000335725 THAP3Q8WTV1 239 aaPredicted RBP8.02□□□□□ -1.13
TDP1-201ENST00000335725 SLC25A28Q96A46 364 aa8.02□□□□□ -1.13
TDP1-201ENST00000335725 DTD2Q96FN9 168 aa8.02□□□□□ -1.13
TDP1-201ENST00000335725 HSPA12BQ96MM6 686 aa8.02□□□□□ -1.13
TDP1-201ENST00000335725 SEPT5Q99719 369 aaPredicted RBP8.02□□□□□ -1.13
TDP1-201ENST00000335725 RAB6CQ9H0N0 254 aa8.02□□□□□ -1.13
TDP1-201ENST00000335725 LPAR2Q9HBW0 351 aa8.02□□□□□ -1.13
TDP1-201ENST00000335725 NCDNQ9UBB6 729 aa8.02□□□□□ -1.13
TDP1-201ENST00000335725 SUSD2Q9UGT4 822 aa8.02□□□□□ -1.13
TDP1-201ENST00000335725 CD84Q9UIB8 345 aa8.02□□□□□ -1.13
TDP1-201ENST00000335725 CBLCQ9ULV8 474 aa8.02□□□□□ -1.13
TDP1-201ENST00000335725 PLRG1O43660 514 aaKnown RBP8.02□□□□□ -1.13
TDP1-201ENST00000335725 SOD1P00441 154 aa8.02□□□□□ -1.13
TDP1-201ENST00000335725 GCGP01275 180 aa8.02□□□□□ -1.13
TDP1-201ENST00000335725 HLA-DPB1P04440 258 aa8.02□□□□□ -1.13
TDP1-201ENST00000335725 SRPRAP08240 638 aaKnown RBP8.02□□□□□ -1.13
TDP1-201ENST00000335725 TBC1D3HP0C7X1 549 aa8.02□□□□□ -1.13
TDP1-201ENST00000335725 CEACAM8P31997 349 aaPredicted RBP8.02□□□□□ -1.13
TDP1-201ENST00000335725 MMP15P51511 669 aa8.02□□□□□ -1.13
TDP1-201ENST00000335725 CAV3P56539 151 aa8.02□□□□□ -1.13
TDP1-201ENST00000335725 ZNF235Q14590 738 aa8.02□□□□□ -1.13
TDP1-201ENST00000335725 RGMBQ6NW40 437 aa8.02□□□□□ -1.13
TDP1-201ENST00000335725 FAM24BQ8N5W8 94 aa8.02□□□□□ -1.13
TDP1-201ENST00000335725 JOSD2Q8TAC2 188 aa8.02□□□□□ -1.13
TDP1-201ENST00000335725 LIPHQ8WWY8 451 aa8.02□□□□□ -1.13
TDP1-201ENST00000335725 MYOTQ9UBF9 498 aa8.02□□□□□ -1.13
TDP1-201ENST00000335725 ATF5Q9Y2D1 282 aaPredicted RBP8.02□□□□□ -1.13
TDP1-201ENST00000335725 YARS2Q9Y2Z4 477 aaKnown RBP8.02□□□□□ -1.13
TDP1-201ENST00000335725 TIMM10BQ9Y5J6 103 aa8.02□□□□□ -1.13
TDP1-201ENST00000335725 XKRY2A2RUG3 117 aa8.02□□□□□ -1.13
TDP1-201ENST00000335725 SLC25A17O43808 307 aa8.02□□□□□ -1.13
TDP1-201ENST00000335725 ENTPD6O75354 484 aa8.02□□□□□ -1.13
TDP1-201ENST00000335725 CLDN9O95484 217 aa8.02□□□□□ -1.13
TDP1-201ENST00000335725 BCHEP06276 602 aa8.02□□□□□ -1.13
TDP1-201ENST00000335725 FAM189BP81408 668 aa8.02□□□□□ -1.13
TDP1-201ENST00000335725 OR5I1Q13606 314 aa8.02□□□□□ -1.13
TDP1-201ENST00000335725 SEZ6Q53EL9 994 aa8.02□□□□□ -1.13
TDP1-201ENST00000335725 GGNBP1Q5YKI7 109 aa8.02□□□□□ -1.13
TDP1-201ENST00000335725 WSCD1Q658N2 575 aa8.02□□□□□ -1.13
TDP1-201ENST00000335725 OR2A2Q6IF42 318 aa8.02□□□□□ -1.13
TDP1-201ENST00000335725 SLC22A25Q6T423 547 aa8.02□□□□□ -1.13
TDP1-201ENST00000335725 Q6ZPB1 254 aaPredicted RBP8.02□□□□□ -1.13
TDP1-201ENST00000335725 UBE2R2Q712K3 238 aaPredicted RBP8.02□□□□□ -1.13
TDP1-201ENST00000335725 MYPOPQ86VE0 399 aaPredicted RBP8.02□□□□□ -1.13
TDP1-201ENST00000335725 OR5D18Q8NGL1 313 aa8.02□□□□□ -1.13
TDP1-201ENST00000335725 PCDH19Q8TAB3 1148 aa8.02□□□□□ -1.13
TDP1-201ENST00000335725 ST6GALNAC4Q9H4F1 302 aa8.02□□□□□ -1.13
TDP1-201ENST00000335725 ACKR4Q9NPB9 350 aa8.02□□□□□ -1.13
TDP1-201ENST00000335725 CHRNA9Q9UGM1 479 aa8.02□□□□□ -1.13
TDP1-201ENST00000335725 KCND3Q9UK17 655 aa8.02□□□□□ -1.13
TDP1-201ENST00000335725 FZD1Q9UP38 647 aa8.02□□□□□ -1.13
TDP1-201ENST00000335725 LHX6Q9UPM6 363 aa8.02□□□□□ -1.13
TDP1-201ENST00000335725 POMT1Q9Y6A1 747 aa8.02□□□□□ -1.13
TDP1-201ENST00000335725 USP3Q9Y6I4 520 aa8.02□□□□□ -1.13
TDP1-201ENST00000335725 CCDC85CA6NKD9 419 aa8.01□□□□□ -1.13
TDP1-201ENST00000335725 COCHO43405 550 aa8.01□□□□□ -1.13
TDP1-201ENST00000335725 FMO6PO60774 539 aa8.01□□□□□ -1.13
TDP1-201ENST00000335725 CD79AP11912 226 aa8.01□□□□□ -1.13
TDP1-201ENST00000335725 PCSK1P29120 753 aa8.01□□□□□ -1.13
TDP1-201ENST00000335725 CLDN8P56748 225 aa8.01□□□□□ -1.13
TDP1-201ENST00000335725 SH3BP2P78314 561 aa8.01□□□□□ -1.13
TDP1-201ENST00000335725 ARF5P84085 180 aa8.01□□□□□ -1.13
TDP1-201ENST00000335725 INSM1Q01101 510 aaPredicted RBP8.01□□□□□ -1.13
TDP1-201ENST00000335725 ZNF616Q08AN1 781 aa8.01□□□□□ -1.13
TDP1-201ENST00000335725 RHEBQ15382 184 aa8.01□□□□□ -1.13
TDP1-201ENST00000335725 MOGAT2Q3SYC2 334 aa8.01□□□□□ -1.13
TDP1-201ENST00000335725 UNC50Q53HI1 259 aa8.01□□□□□ -1.13
TDP1-201ENST00000335725 UBXN11Q5T124 520 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms